Characterization of a new potyvirus isolated from Chinese artichoke in Japan

Archives of Virology

Volumn 148, Issue 11, 2003, Pages 2249-2255

  Fuji, S ^a   Yamamoto, H ^b   Furuya, H ^a   Naito, H ^a  

^a AKITA PREFECTURAL UNIVERSITY   (Japan)

^b Akita Agric Experiment Station   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEINS; CYNARA SCOLYMUS; PHYLOGENY; POTYVIRUS;

CHINESE ARTICHOKE MOSAIC VIRUS; CYNARA SCOLYMUS; PERILLA; PERILLA FRUTESCENS; POTYVIRUS; RNA VIRUSES;

EID: 0344304519     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-003-0169-7     Document Type: Article

References (13)

1. Atreya CD, Reccah B, Prione TP (1990) A point mutation in the coat protein abolishes aphid transmission of a potyvirus. Virology 178: 161-165
2. Brunt AA (1996) Perilla mottle (?) potyvirus. In: Brunt AA, Crabtree K, Dallwitz MJ, Gibbs AJ, Watson L (eds) Viruses of plants: Descriptions lists from the VIDE database. CAB International, Cambridge pp 962-963
3. Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791
4. Gibbs A, Mackenzie A (1997) A primer pair for amplifying part of the genome of all potyvirid by RT-PCR. J Virol Methods 63: 9-16
5. Kimura M (1980) A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequence. J Mol Evol 16: 111-120
6. Kishino H, Hasegawa H (1989) Evalution of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J Mol Evol 29: 170-179
7. Lee JT, Yamashita S, Doi Y, Yora K (1980) A potyvirus found in mosaic plants of perilla. Ann Phytopathol Soc Japan 46: 672-676 (in Japanese)
8. Saitou N, Nei M (1987) The neighbour-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425
9. Shukla DD, Ward CW, Brunt AA (1994) The Potyviridae. CAB International, Cambridge
10. The Phytopathological Society of Japan (2000) Common names of plant diseases in Japan. Japan Plant Protection Association, Tokyo (in Japanese)
11. Swafford DL (1998) PAUP* Phylogenetic analysis under parsimony (*and other methods). Version 4.0 Sinauer Associates Sunderland, MA
12. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequencing weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680
13. Van Regenmortel MHV, Fauquet CM, Bishop DHL, Carstens EB, Estes MK, Lemon SM, McGeoch DJ, Maniloff J, Mayo MA, Pringle CR, Wickner RB (2000) Seventh ICTV Report. Academic Press, New York