메뉴 건너뛰기




Volumn 18, Issue SUPPL. 2, 2002, Pages

Modeling splicing sites with pairwise correlations

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 0344289654     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/18.suppl_2.S27     Document Type: Conference Paper
Times cited : (21)

References (19)
  • 1
    • 0031652639 scopus 로고    scopus 로고
    • Detecting non-adjoining correlations within signals in DNA
    • ACM Press
    • Agarwal,P. and Bafna,V. (1998) Detecting non-adjoining correlations within signals in DNA. In Proceedings of the 2nd RECOMB Conference. ACM Press, pp. 2-8.
    • (1998) Proceedings of the 2nd RECOMB Conference , pp. 2-8
    • Agarwal, P.1    Bafna, V.2
  • 2
    • 0031616410 scopus 로고    scopus 로고
    • Recognition of human genes by stochastic parsing
    • World Scientific, Hawaii
    • Asai,K., Itou,K., Ueno,Y. and Yada,T. (1998) Recognition of human genes by stochastic parsing. In Pacific Symposium on Biocomputing (PSB98). World Scientific, Hawaii, pp. 228-239. http://www.genedecoder.org/.
    • (1998) Pacific Symposium on Biocomputing (PSB98) , pp. 228-239
    • Asai, K.1    Itou, K.2    Ueno, Y.3    Yada, T.4
  • 3
    • 0002881703 scopus 로고
    • A representation of the joint distribution of responses to n dichotomous items
    • Solomon,H. (ed.), Stanford University Press
    • Bahadur,R.R. (1961) A representation of the joint distribution of responses to n dichotomous items. In Solomon,H. (ed.), Studies in Item Analysis and Prediction. Stanford University Press, pp. 158-168.
    • (1961) Studies in Item Analysis and Prediction , pp. 158-168
    • Bahadur, R.R.1
  • 4
    • 0025744474 scopus 로고
    • Prediction of human mRNA donor and acceptor sites from the DNA sequences
    • Brunak,S., Engelbrecht,J. and Knudsen,S. (1991) Prediction of human mRNA donor and acceptor sites from the DNA sequences. J. Mol. Biol., 220, 49-65.
    • (1991) J. Mol. Biol. , vol.220 , pp. 49-65
    • Brunak, S.1    Engelbrecht, J.2    Knudsen, S.3
  • 5
    • 61649085735 scopus 로고    scopus 로고
    • Modeling dependencies in pre-mRNA splicing signals
    • Salzberg,S.L., Searls,D.B. and Kasif,S. (eds), Elsevier
    • Burge,C.B. (1998) Modeling dependencies in pre-mRNA splicing signals. In Salzberg,S.L., Searls,D.B. and Kasif,S. (eds), Computational Methods in Molecular Biology. Elsevier, pp. 129-164.
    • (1998) Computational Methods in Molecular Biology , pp. 129-164
    • Burge, C.B.1
  • 6
    • 0034136782 scopus 로고    scopus 로고
    • Modeling splice sites with Bayes networks
    • Cai,D., Delcher,A., Kao,B. and Kasif,S. (2000) Modeling splice sites with Bayes networks. Bioinformatics, 16, 152-158.
    • (2000) Bioinformatics , vol.16 , pp. 152-158
    • Cai, D.1    Delcher, A.2    Kao, B.3    Kasif, S.4
  • 10
    • 0342407122 scopus 로고    scopus 로고
    • The exploration of new methods for learning in binary Boltzmann machines
    • Heckerman,D. and Whittaker,J. (eds), Morgan Kaufmann, San Francisco
    • Humphreys,K. and Titterington,D. (1999) The exploration of new methods for learning in binary Boltzmann machines. In Heckerman,D. and Whittaker,J. (eds), Artificial Intelligence and Statistics 99. Morgan Kaufmann, San Francisco, pp. 209-214.
    • (1999) Artificial Intelligence and Statistics 99 , pp. 209-214
    • Humphreys, K.1    Titterington, D.2
  • 11
    • 0033977575 scopus 로고    scopus 로고
    • The intronerator: Exploring introns and alternative splicing in C. elegans
    • Kent,W.J. and Zahler,A.M. (2000) The intronerator: exploring introns and alternative splicing in C. elegans. Nucleic Acids Res., 28, 91-93. http://www.cse.ucsc.edu/~kent/intronerator/.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 91-93
    • Kent, W.J.1    Zahler, A.M.2
  • 12
    • 0001225030 scopus 로고
    • Term dependence: Truncating the Bahadur Lazarsfeld expansion
    • Losee,R. (1994) Term dependence: Truncating the Bahadur Lazarsfeld expansion. Information Processing and Management, 30, 293-303.
    • (1994) Information Processing and Management , vol.30 , pp. 293-303
    • Losee, R.1
  • 13
    • 0020050314 scopus 로고
    • A catalogue of splice junction sequences
    • Mount,S. (1982) A catalogue of splice junction sequences. Nucleic Acids Res., 10, 459-472.
    • (1982) Nucleic Acids Res. , vol.10 , pp. 459-472
    • Mount, S.1
  • 14
    • 0030787520 scopus 로고    scopus 로고
    • Improved splice site detection in genie
    • Reese,M.G., Eeckman,F.H., Kulp,D. and Haussler,D. (1997) Improved splice site detection in genie. J. Comput. Biol., 4, 311-323. http://www.fruitfly.org/ seq_tools/datasets/Human/.
    • (1997) J. Comput. Biol. , vol.4 , pp. 311-323
    • Reese, M.G.1    Eeckman, F.H.2    Kulp, D.3    Haussler, D.4
  • 15
    • 0030869663 scopus 로고    scopus 로고
    • A method for identifying splice sites and translational start sites in eukaryotic mRNA
    • Salzberg,S. (1997) A method for identifying splice sites and translational start sites in eukaryotic mRNA. Comput. Appl. Biosci., 13, 365-376.
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 365-376
    • Salzberg, S.1
  • 16
    • 0023651307 scopus 로고
    • RNA splice junctions of different classes of eucaryotes: Sequence statistics and functional implications in gene expression
    • Shapiro,M. and Senapathy,P. (1987) RNA splice junctions of different classes of eucaryotes: Sequence statistics and functional implications in gene expression. Nucleic Acids. Res., 15, 7155-7174.
    • (1987) Nucleic Acids. Res. , vol.15 , pp. 7155-7174
    • Shapiro, M.1    Senapathy, P.2
  • 17
    • 0023045731 scopus 로고
    • The current status and portability of our sequence handling software
    • Staden,R. (1986) The current status and portability of our sequence handling software. Nucleic Acids Res., 14, 217-231.
    • (1986) Nucleic Acids Res. , vol.14 , pp. 217-231
    • Staden, R.1
  • 18
    • 0027377256 scopus 로고
    • A weight array method for splicing signal analysis
    • Zhang,M. and Marr,T. (1993) A weight array method for splicing signal analysis. Comput. Appl. Biosci., 9, 499-509.
    • (1993) Comput. Appl. Biosci. , vol.9 , pp. 499-509
    • Zhang, M.1    Marr, T.2
  • 19
    • 0033670134 scopus 로고    scopus 로고
    • Engineering support vector machine kernels that recognize translation initiation sites
    • Zien,A., Rätsch,G., Mika,S., Schölkopf,B., Lengauer,T. and Müller,K.-R. (2000) Engineering support vector machine kernels that recognize translation initiation sites. Bioinformatics, 16, 799-807.
    • (2000) Bioinformatics , vol.16 , pp. 799-807
    • Zien, A.1    Rätsch, G.2    Mika, S.3    Schölkopf, B.4    Lengauer, T.5    Müller, K.-R.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.