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Volumn 259, Issue 5, 1996, Pages 916-925

Inhibition of the self-cleavage reaction of the human hepatitis delta virus ribozyme by antibiotics

Author keywords

Antiviral; Catalytic RNA; MgCl2; Neomycin; RNA footprint

Indexed keywords

AMINOGLYCOSIDE ANTIBIOTIC AGENT; ANTIBIOTIC AGENT; LEAD ACETATE; MAGNESIUM ION; NEOMYCIN; POLYPEPTIDE ANTIBIOTIC AGENT; RIBOZYME; TETRACYCLINE DERIVATIVE; UNINDEXED DRUG;

EID: 0343799864     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1996.0369     Document Type: Article
Times cited : (139)

References (32)
  • 1
    • 0023047647 scopus 로고
    • Ribozyme inhibitors: Deoxyguanosine and dideoxyguanosine are competitive inhibitors of self-splicing of the Tetrahymena ribosomal ribonucleic acid precursor
    • Bass, B. L. & Cech T. R. (1986). Ribozyme inhibitors: deoxyguanosine and dideoxyguanosine are competitive inhibitors of self-splicing of the Tetrahymena ribosomal ribonucleic acid precursor. Biochemistry, 25, 4473-4477.
    • (1986) Biochemistry , vol.25 , pp. 4473-4477
    • Bass, B.L.1    Cech, T.R.2
  • 2
    • 0020708497 scopus 로고
    • Nitrogen-15 nuclear magnetic resonance spectroscopy of neomycin B and related aminoglycosides
    • Botto, R. E. & Coxon, B. (1983). Nitrogen-15 nuclear magnetic resonance spectroscopy of neomycin B and related aminoglycosides. J. Am. Chem. Soc. 105, 1021-1028.
    • (1983) J. Am. Chem. Soc. , vol.105 , pp. 1021-1028
    • Botto, R.E.1    Coxon, B.2
  • 3
    • 0020594894 scopus 로고
    • Pb(II)-catalyzed cleavage of the sugar-phosphate backbone of yeast tRNA Phe - Implications for lead toxicity and self-splicing RNA
    • Brown, R. S., Hingerty, B. E., Dewan, J.C. & Klug, A. (1983). Pb(II)-catalyzed cleavage of the sugar-phosphate backbone of yeast tRNA Phe -implications for lead toxicity and self-splicing RNA. Nature, 303, 543-546.
    • (1983) Nature , vol.303 , pp. 543-546
    • Brown, R.S.1    Hingerty, B.E.2    Dewan, J.C.3    Klug, A.4
  • 4
    • 0028349467 scopus 로고
    • Tetracycline analogs whose primary target is not the bacterial ribosome
    • Chopra, I. (1994). Tetracycline analogs whose primary target is not the bacterial ribosome. Antimicrob. Agents Chemother, 38, 637-640.
    • (1994) Antimicrob. Agents Chemother , vol.38 , pp. 637-640
    • Chopra, I.1
  • 5
    • 0029113144 scopus 로고
    • Neomycin inhibition of the hammerhead ribozyme involves ionic interactions
    • Clouet-d'Orval B., Stage T. K. & Uhlenbeck O. C. (1995). Neomycin inhibition of the hammerhead ribozyme involves ionic interactions. Biochemistry, 34, 11186-11190.
    • (1995) Biochemistry , vol.34 , pp. 11186-11190
    • Clouet-D'Orval, B.1    Stage, T.K.2    Uhlenbeck, O.C.3
  • 6
    • 0002957724 scopus 로고
    • Antibiotics and the RNA world: A role for low-molecular-weight effectors in biochemical evolution?
    • (Gesteland, R. F. & Atkins, J. F., eds), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Davies, J., von Ahsen, U. & Schroeder, R. (1993). Antibiotics and the RNA world: a role for low-molecular-weight effectors in biochemical evolution? In The RNA World (Gesteland, R. F. & Atkins, J. F., eds), pp. 185-204, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1993) The RNA World , pp. 185-204
    • Davies, J.1    Von Ahsen, U.2    Schroeder, R.3
  • 7
    • 0027937331 scopus 로고
    • Identification of phosphate oxygens that are important for self-cleavage activity of the HDV ribozyme by phosphorothioate substitution interference analysis
    • Jeoung, Y.-H., Kumar, P. K. R., Young-Ah, S., Taira, K., Nishikawa, S. (1994). Identification of phosphate oxygens that are important for self-cleavage activity of the HDV ribozyme by phosphorothioate substitution interference analysis. Nucl. Acids Res. 22, 3722-3727.
    • (1994) Nucl. Acids Res. , vol.22 , pp. 3722-3727
    • Jeoung, Y.-H.1    Kumar, P.K.R.2    Young-Ah, S.3    Taira, K.4    Nishikawa, S.5
  • 8
    • 0027535112 scopus 로고
    • Replication of hepatitis delta virus RNA: Effect of mutations of the autocatalytic sites
    • Macnaughton, T. B., Wang, Y. J., Lai, M. M. (1993). Replication of hepatitis delta virus RNA: effect of mutations of the autocatalytic sites. J. Virol. 67, 2228-2234.
    • (1993) J. Virol. , vol.67 , pp. 2228-2234
    • Macnaughton, T.B.1    Wang, Y.J.2    Lai, M.M.3
  • 9
    • 0028500393 scopus 로고
    • DRAWNA: A program for drawing schematic views of nucleic acids
    • Massire, C., Gaspin, C. & Westhof, E. (1994). DRAWNA: a program for drawing schematic views of nucleic acids. J. Mol. Graph. 12, 201-206.
    • (1994) J. Mol. Graph. , vol.12 , pp. 201-206
    • Massire, C.1    Gaspin, C.2    Westhof, E.3
  • 10
    • 0023238983 scopus 로고
    • Interaction of antibiotics with functional sites in 16 S ribosomal RNA
    • Moazed, D. & Noller, H. F. (1987). Interaction of antibiotics with functional sites in 16 S ribosomal RNA. Nature, 327, 389-394.
    • (1987) Nature , vol.327 , pp. 389-394
    • Moazed, D.1    Noller, H.F.2
  • 12
    • 0018459544 scopus 로고
    • Direct chemical method for sequencing RNA
    • Peattie, D. A. (1979). Direct chemical method for sequencing RNA. Proc. Natl Acad. Sci. USA, 76, 1760-1764.
    • (1979) Proc. Natl Acad. Sci. USA , vol.76 , pp. 1760-1764
    • Peattie, D.A.1
  • 13
    • 0025597973 scopus 로고
    • The self-cleaving domain from the genomic RNA of hepatitis delta virus: Sequence requirements and the effects of denaturant
    • Perrotta, A. T. & Been, M. D. (1990). The self-cleaving domain from the genomic RNA of hepatitis delta virus: sequence requirements and the effects of denaturant. Nucl. Acids Res. 18, 6821-6827.
    • (1990) Nucl. Acids Res. , vol.18 , pp. 6821-6827
    • Perrotta, A.T.1    Been, M.D.2
  • 14
    • 0025882069 scopus 로고
    • A pseudoknot-like structure required for efficient self-cleavage of hepatitis delta virus RNA
    • Perrotta, A. T. & Been, M. D. (1991). A pseudoknot-like structure required for efficient self-cleavage of hepatitis delta virus RNA. Nature, 350, 434-436.
    • (1991) Nature , vol.350 , pp. 434-436
    • Perrotta, A.T.1    Been, M.D.2
  • 15
    • 0028556684 scopus 로고
    • The pseudodisaccharides: A novel class of group I intron splicing inhibitors
    • Rogers, J. & Davies, J. (1994). The pseudodisaccharides: a novel class of group I intron splicing inhibitors. Nucl. Acids Res. 24, 4983-4988.
    • (1994) Nucl. Acids Res. , vol.24 , pp. 4983-4988
    • Rogers, J.1    Davies, J.2
  • 16
    • 0025082875 scopus 로고
    • Self-cleavage of hepatitis delta virus genomic strand RNA is enhanced under partially denaturing conditions
    • Rosenstein, S. P. & Been, M. D. (1990). Self-cleavage of hepatitis delta virus genomic strand RNA is enhanced under partially denaturing conditions. Biochemistry, 29, 8011-8016.
    • (1990) Biochemistry , vol.29 , pp. 8011-8016
    • Rosenstein, S.P.1    Been, M.D.2
  • 17
    • 0023747377 scopus 로고
    • Antigenomic RNA of human hepatitis delta virus can undergo self-cleavage
    • Sharmeen, L., Kuo, M. Y., Dineter-Gottlieb, G. & Taylor, J. (1988). Antigenomic RNA of human hepatitis delta virus can undergo self-cleavage. J. Virol. 62, 2674-2679.
    • (1988) J. Virol. , vol.62 , pp. 2674-2679
    • Sharmeen, L.1    Kuo, M.Y.2    Dineter-Gottlieb, G.3    Taylor, J.4
  • 18
    • 0029258393 scopus 로고
    • Inhibition of the hammerhead ribozyme by neomycin
    • Stage, T. K., Hertel, K. J. & Uhlenbeck, O. C. (1995). Inhibition of the hammerhead ribozyme by neomycin. RNA, 1, 95-101.
    • (1995) RNA , vol.1 , pp. 95-101
    • Stage, T.K.1    Hertel, K.J.2    Uhlenbeck, O.C.3
  • 19
    • 0024241761 scopus 로고
    • Structural analysis of RNA using chemical and enzymatic probing monitored by primer extension
    • Stern, S., Moazed, D. & Noller, H. F. (1988). Structural analysis of RNA using chemical and enzymatic probing monitored by primer extension. Methods Enzymol. 164, 481-489.
    • (1988) Methods Enzymol. , vol.164 , pp. 481-489
    • Stern, S.1    Moazed, D.2    Noller, H.F.3
  • 20
    • 0027318824 scopus 로고
    • Lead cleavage sites in the core structure of group I intron-RNA
    • Streicher, B., von Ahsen, U. & Schroeder, R. (1993). Lead cleavage sites in the core structure of group I intron-RNA. Nucl. Acids Res. 21, 311-317.
    • (1993) Nucl. Acids Res. , vol.21 , pp. 311-317
    • Streicher, B.1    Von Ahsen, U.2    Schroeder, R.3
  • 21
    • 0027305803 scopus 로고
    • Self-cleavage activity of the genomic HDV ribozyme in the presence of various divalent metal ions
    • Suh, Y., Kumar, P. K. R., Taira, K. & Nishikawa, S. (1993). Self-cleavage activity of the genomic HDV ribozyme in the presence of various divalent metal ions. Nucl. Acids Res. 21, 3277-3280.
    • (1993) Nucl. Acids Res. , vol.21 , pp. 3277-3280
    • Suh, Y.1    Kumar, P.K.R.2    Taira, K.3    Nishikawa, S.4
  • 22
    • 0024436928 scopus 로고
    • Self-cleavage of RNA in the replication of small pathogens of plants and animals
    • Symons, R. H. (1989). Self-cleavage of RNA in the replication of small pathogens of plants and animals. Trends Biochem. Sci. 14, 445-450.
    • (1989) Trends Biochem. Sci. , vol.14 , pp. 445-450
    • Symons, R.H.1
  • 23
    • 0028446537 scopus 로고
    • A three-dimensional model of hepatitis delta virus ribozyme based on biochemical and mutational analyses
    • Tanner, N. K., Schaff, S., Thill, G., Petit-Koskas, E., Crain-Denoyelle, A. & Westhof, E. (1994). A three-dimensional model of hepatitis delta virus ribozyme based on biochemical and mutational analyses. Curr. Biol. 4, 488-498.
    • (1994) Curr. Biol. , vol.4 , pp. 488-498
    • Tanner, N.K.1    Schaff, S.2    Thill, G.3    Petit-Koskas, E.C.4    Crain-Denoylle, A.5    Westhof, E.6
  • 24
    • 0026409240 scopus 로고
    • Self-cleavage of a 71 nucleotide-long ribozyme derived from hepatitis delta virus genomic RNA
    • Thill, G., Blumenfeld, M., Lescure, F. & Vasseur, M. (1991). Self-cleavage of a 71 nucleotide-long ribozyme derived from hepatitis delta virus genomic RNA. Nucl. Acids Res. 19, 6519-6525.
    • (1991) Nucl. Acids Res. , vol.19 , pp. 6519-6525
    • Thill, G.1    Blumenfeld, M.2    Lescure, F.3    Vasseur, M.4
  • 25
    • 0027242380 scopus 로고
    • Footprinting the sites of interaction of antibiotics with catalytic group I intron RNA
    • von Ahsen, U. & Noller, H. F. (1993). Footprinting the sites of interaction of antibiotics with catalytic group I intron RNA. Science, 260, 1500-1502.
    • (1993) Science , vol.260 , pp. 1500-1502
    • Von Ahsen, U.1    Noller, H.F.2
  • 26
    • 0025892658 scopus 로고
    • Streptomycin inhibits splicing of group I introns by competition with the guanosine substrate
    • von Ahsen, U. & Schroeder, R. (1991). Streptomycin inhibits splicing of group I introns by competition with the guanosine substrate. Nucl. Acids Res. 19, 2261-2265.
    • (1991) Nucl. Acids Res. , vol.19 , pp. 2261-2265
    • Von Ahsen, U.1    Schroeder, R.2
  • 27
    • 0025873818 scopus 로고
    • Antibiotic inhibition of group I ribozyme function
    • von Ahsen, U., Davies, J. & Schroeder, R. (1991). Antibiotic inhibition of group I ribozyme function. Nature, 353, 368-370.
    • (1991) Nature , vol.353 , pp. 368-370
    • Von Ahsen, U.1    Davies, J.2    Schroeder, R.3
  • 28
    • 0026447727 scopus 로고
    • Non-competitive inhibition of group I intron RNA self-splicing by aminoglycoside antibiotics
    • von Ahsen, U., Davies, J. & Schroeder, R. (1992). Non-competitive inhibition of group I intron RNA self-splicing by aminoglycoside antibiotics. J. Mol. Biol. 226, 935-941.
    • (1992) J. Mol. Biol. , vol.226 , pp. 935-941
    • Von Ahsen, U.1    Davies, J.2    Schroeder, R.3
  • 29
    • 0028316436 scopus 로고
    • Peptide antibiotics of the tuberactinomycin family as inhibitors of group I intron RNA splicing
    • Wank, H., Rogers, J., Davies, J. & Schroeder, R. (1994). Peptide antibiotics of the tuberactinomycin family as inhibitors of group I intron RNA splicing. J. Mol. Biol. 236, 1001-1010.
    • (1994) J. Mol. Biol. , vol.236 , pp. 1001-1010
    • Wank, H.1    Rogers, J.2    Davies, J.3    Schroeder, R.4
  • 30
    • 0003463893 scopus 로고
    • Human hepatitis δ virus RNA subfragments contain an autocleavage activity
    • Wu, H., Lin, Y., Lin, F., Makino, S., Chang, M. & Lai M. M. C. (1989). Human hepatitis δ virus RNA subfragments contain an autocleavage activity. Proc. Natl Acad. Sci. USA, 86, 1831-1835.
    • (1989) Proc. Natl Acad. Sci. USA , vol.86 , pp. 1831-1835
    • Wu, H.1    Lin, Y.2    Lin, F.3    Makino, S.4    Chang, M.5    Lai, M.M.C.6
  • 31
    • 0024295779 scopus 로고
    • A specific amino acid binding site composed of RNA
    • Yarus, M. (1988). A specific amino acid binding site composed of RNA. Science, 240, 1751-1758.
    • (1988) Science , vol.240 , pp. 1751-1758
    • Yarus, M.1
  • 32
    • 0027370433 scopus 로고
    • Small molecules that selectively block RNA binding of HIV-1 Rev protein inhibit Rev function and viral production
    • Zapp, M. L., Stern, S. & Green, M. R. (1993). Small molecules that selectively block RNA binding of HIV-1 Rev protein inhibit Rev function and viral production. Cell, 74, 969-978.
    • (1993) Cell , vol.74 , pp. 969-978
    • Zapp, M.L.1    Stern, S.2    Green, M.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.