Detection and characterization of a Canadian tobacco rattle virus isolate using a PCR-based assay

Canadian Journal of Plant Pathology

Volumn 19, Issue 1, 1997, Pages 101-105

  Kawchuk, L M ^a   Lynch, D R ^a   Leggett, F L ^a   Howard, R J ^b   McDonald, J G ^c  

^a LETHBRIDGE RESEARCH CENTRE   (Canada)

^b ALBERTA AGRICULTURE AND RURAL DEVELOPMENT   (Canada)

^c AGRICULTURE AND AGRI FOOD CANADA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

NICOTIANA TABACUM; SOLANUM TUBEROSUM; TOBACCO RATTLE VIRUS;

EID: 0343666863     PISSN: 07060661     EISSN: 17152992     Source Type: Journal    
DOI: 10.1080/07060669709500562     Document Type: Article

References (23)

1. Angenent, G. C., Posthumus, E., Brederode, F. T., and Bol, J. F., 1989. Genome structure of tobacco rattle virus strain PLB:further evidence on the occurrence of RNA recombination among tobraviruses. Virology, 171:271–274.
2. Calvert, E. C., and Harrison, B. D., 1966. Potato mop-top, a soilborne virus. Plant Pathol., 15:134–139.
3. Cooper, J. I., 1971. The distribution in Scotland of tobacco rattle virus and its nematode vectors in relation to soil type. Plant Pathol., 20:51–58.
4. Cooper, J. I., and Harrison, B. D., 1973. The role of weed hosts and the distribution and activity of vector nematodes in the ecology of tobacco rattle virus. Ann. Appl. Biol., 73:53–66.
5. Cornelissen, B. J. C., Linthorst, H. J. M., Brederode, F. T. H., and Bol, J. F., 1986. Analysis of the genome structure of tobacco rattle virus strain PSG. Nucleic Acids Res., 14:2157–2169.
6. Crosslin, J. M., and Thomas, P. E., 1995. Detection of tobacco rattle virus in tubers exhibiting symptoms of corky ringspot by polymerase chain reaction. Am. Potato J., 72:605–609.
7. Fang, G., Hammar, S., and Grumet, R., 1992. A quick and inexpensive method for removing polysaccharides from plant genomic DNA. BioTechniques, 13:52–56.
8. Hamilton, D. O., Boccara, M., Robinson, D. J., and Baulcombe, D. C., 1987. The complete nucleotide sequence of tobacco rattle virus RNA-1. J. Gen. Virol., 68:2563–2575.
9. Harrison, B. D., and Robinson, D. J., 1978. The tobraviruses. Adv. Virus Res., 23:25–77.
10. Harrison, B. D., and Robinson, D. J., 1982. Genome reconstitution and nucleic acid hybridization as methods of identifying particle-deficient isolates of tobacco rattle virus in potato plants with stem-mottle disease. J. Virol. Methods, 5:255–265.
11. Harrison, B. D., and Robinson, D. J., 1986. “ Tobraviruses ”. In The Plant Viruses, Edited by:van Regenmortel, M. H. V., and Fraenkel-Conrat, H., Vol. 2, 339–369. New York:Plenum Press.
12. Howard, R. J., Dykstra, M., and Stace-Smith, R., 1984. Corky ring spot:a virus disease of potatoes new in Canada. Proc. Prairie Potato Council, 12:27–31.
13. Kurppa, A., Jones, A. T., Harrison, B. D., and Bailiss, K. W., 1981. Properties of spinach yellow mottle, a distinctive strain of tobacco rattle virus. Ann. Appl. Biol., 98:243–254.
14. Ploeg, A. T., Brown, D. J. F., and Robinson, D. J., 1992. Acquisition and subsequent transmission of tobacco rattle virus isolates by Paratrichodorus and Trichodorus nematode species. Neth. J. Plant Pathol., 98:291–300.
15. Robinson, D. J., 1992. Detection of tobacco rattle virus by reverse transcription and polymerase chain reaction. J. Virol. Methods, 40:57–66.
16. Robinson, D. J., and Harrison, B. D., 1985. Unequal variation in the two genome parts of tobraviruses and evidence for the existence of three separate viruses. J. Gen. Virol., 66:171–176.
17. Robinson, D. J., and Harrison, B. D., 1989. Tobacco rattle virus, AAB Descriptions of Plant Viruses, No. 346 Kew, England:Commonw. Mycol. Inst./Assoc. Appl. Biol. 6 pp
18. Sambrook, J., Fritsch, E. F., and Maniatis, T., 1989. Molecular cloning:a laboratory manual, Cold Spring Harbor, New York:Cold Spring Harbor Laboratory Press.
19. Stace-Smith, R., and Frowd, J. A., 1983. Tobacco rattle virus isolated from potato tubers in Saskatchewan. Can. J. Plant Pathol., 5:211–212. Abstr.
20. Thuring, R. W. J., Sanders, J. P. M., and Borst, P., 1975. A freezesqueeze method for recovering long DNA from agarose gels. Anal. Biochem., 66:213–220.
21. Van der Wilk, F., Korsman, M., and Zoon, F., 1994. Detection of tobacco rattle virus in nematodes by reverse transcription and polymerase chain reaction. Eur. J. Plant Pathol., 100:109–122.
22. Van Hoof, H. A., 1964. Het tijdstip van infectie en veranderingen in de concentratie van ratelvirus (kringerigheid) in de aardapelknol. Meded. Landbouwhogesch. Opzoekingsstn. Staal Gent, 29:944–955.
23. Weidemann, H.-L., 1995. Detection of tobacco rattle virus in potato tubers and roots by polymerase chain reaction (PCR). J. Phytopathol., 143:455–458.