Molecular phylogenetic relationships of moles, shrew moles, and desmans from the new and old worlds

Molecular Phylogenetics and Evolution

Volumn 27, Issue 2, 2003, Pages 247-258

  Shinohara, Akio ^a,c   Campbell, Kevin L ^b   Suzuki, Hitoshi ^a  

^a HOKKAIDO UNIVERSITY   (Japan)

^b UNIVERSITY OF MANITOBA   (Canada)

^c UNIVERSITY OF MIYAZAKI   (Japan)

Author keywords

Cytochrome b; Desmans; Eulipotyphla; Moles; Phylogeny; Shrew moles; Talpidae

Indexed keywords

CONDYLURA; DESMANA; DYMECODON; EUROSCAPTOR; MOGERA; NEUROTRICHUS; PARASCALOPS; SCALOPUS; SCAPANUS; TALPA; TALPIDAE; UROPSILUS; UROTRICHUS;

EID: 0242584451     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1055-7903(02)00416-5     Document Type: Article

References (43)

1. Abe, H., 1994. Order Insectivora. In: Abe, H. (Ed.), A Pictorial Guide to the Mammals of Japan. Tokai University Press, Tokyo, pp. 17-36, and 156-158 (in Japanese).
2. Abe, H., 1995. Revision of the Asian moles of the genus Mogera. J. Mammal. Soc. Japan 20, 51-68.
3. Allen, G.M., 1938. In: The mammals of China and Mongolia. American Museum of Natural History, New York, pp. 54-83.
4. Anderson, S., Bankier, A.T., Barrell, B.G., de Bruijin, M.H.L., Couslon, A.R., Droujin, J., Eperon, I.C., Nierlich, D.P., Roe, B.A., Sanger, F., Schreier, P.H., Smith, A.J.H., Staden, R., Young, I.G., 1981. Sequence and organization of the human mitochondrial genome. Nature 290, 457-465.
5. Bremer, K., 1988. The limits of amino acid sequence data in angiosperm phylogenetics reconstruction. Evolution 42, 795-803.
6. Campbell, B., 1939. The shoulder anatomy of the moles. A study in phylogeny and adaptation. J. Anat. 64, 1-39.
7. Catania, K.C., 2000. Epidermal sensory organs of moles, shrew moles, and desmans: a study of the family Talpidae with comments on the function and evolution of Eimer's organ. Brain Behav. Evol. 56, 146-174.
8. Corbet, G.B., Hill, J.E., 1991. A World List of Mammalian Species, third ed. Oxford University Press, London.
9. Douady, C.J., Chatelier, P.I., Madsen, O., de Jong, W.W., Catzeflis, F., Springer, M.S., Stanhope, M.J., 2002. Molecular phylogenetic evidence confirming the Eulipotyphla concept and in support of hedgeogs as the sister group to shrews. Mol. Phylogenet. Evol. 25, 200-209.
10. Felsenstein, J., 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17, 368-374.
11. Felsenstein, J., 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 36, 783-791.
12. Harrison, R.G., 1989. Animal mitochondrial DNA as a genetic marker in population and evolutionary biology. Trends Ecol. Evol. 4, 6-11.
13. Hutchison, J.H., 1968. Fossil Talpidae (Insectivora, Mammalia) from the Late Tertiary of Oregon. Bull. Mus. Nat. Hist. Univ. Oregon 11, 1-117.
14. Hutchison, J.H., 1976. The Talpidae (Insectivora, Mammalia): Evolution, Phylogeny, and Classification, Ph.D. dissertation, University of California, Berkeley.
15. Irwin, D.M., Kocher, T.D., Wilson, A.C., 1991. Evolution of the cytochrome b gene of mammals. J. Mol. Evol. 32, 128-144.
16. Iwasa, M.A., Utsumi, Y., Nakata, K., Kartavtseva, I.V., Nevedomskaya, I.A., Kondoh, N., Suzuki, H., 2000. Geographic patterns of cytochrome b and Sry gene lineages in the gray red-backed vole Clethrionomys rufocanus from Far-East Asia including Sakhlin and Hokkaido. Zool. Sci. 17, 477-484.
17. Kimura, M., 1980. A simple method for estimating evolutionary rate of base substitution through comparative studies of nucleotide sequences. J. Mol. Evol. 16, 111-120.
18. McKenna, M.C., Bell, S.K., 1997. Classification of Mammals above the Species Level. Columbia University Press, New York.
19. Moore, D.W., 1986. Systematic and Biogeographic Relationships among the Talpinae (Insectivora: Talpidae), Ph.D. dissertation, University of New Mexico, Albuquerque.
20. Motokawa, M., Abe, H., 1996. On the specific names of the Japanese moles of the genus Mogera (Insectivora, Talpidae). Mammal Study 21, 115-123.
21. Nikaido, M., Kawai, K., Cao, Y., Harada, M., Tomita, S., Okada, N., Hasegawa, M., 2001. Maximum likelihood analysis of the complete mitochondrial genomes of Eutherians and a reevaluation of the phylogeny of bats and insectivores. J. Mol. Evol. 53, 508-516.
22. Nowak, R.M., 1999. Walker's Mammals of the World, sixth ed. Johns Hopkins University Press, Baltimore.
23. Okamoto, M., 1999. Phylogeny of Japanese moles inferred from mitochondrial COI gene sequences. In: Yokohata, Y., Nakamura, S. (Eds.), Recent Advances in the Biology of Japanese Insectivora. Hiba Society of Natural History, Shobara, pp. 21-27.
24. Onuma, M., Cao, Y., Hasegawa, M., Kusakabe, S., 2000. A close relationship of Chiroptera with Eulipotyphla (Core Insectivora) suggested by four mitochondrial genes. Zool. Sci. 17, 1327-1332.
25. Posada, D., Crandall, K.A., 1998. Modeltest; testing the model of DNA substitution. Bioinformatics 14, 817-818.
26. Reed, C.A., 1951. Locomotion and appendicular anatomy in three soricoid insectivores. Am. Midl. Nat. 45, 513-671.
27. Rodriguez, F., Oliver, J.F., Marin, A., Medina, J.R., 1990. The general stochastic model of nucleotide substitution. J. Theor. Biol. 142, 485-501.
28. Saitou, N., Nei, M., 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425.
29. Sorenson, M.D., 1999. TreeRot, Version 2. Boston University, Boston, MA.
30. Stanhope, M.J., Waddell, V.G., Madsen, O., De Jong, W., Hedes, S.B., Cleven, G.C., Kao, D., Springer, M.S., 1998. Molecular evidence for multiple origins of Insectivora and for a new order of endemic African insectivore mammals. Proc. Natl. Acad. Sci. USA 95, 9967-9972.
31. Strimmer, K., von Haeseler, A., 1996. Quartet puzzling: a quartet maximum likelihood method for reconstructing tree topologies. Mol. Biol. Evol. 13, 964-969.
32. Strimmer, K., Goldman, K.E., Simon, C., 1997. Bayesian probabilities and quartet puzzling. Mol. Biol. Evol. 14, 210-211.
33. Suzuki, H., Minato, S., Sakurai, S., Tsuchiya, K., Fokin, I.M., 1997. Phylogenetic position and geographic differentiation of the Japanese dormouse, Glirulus japonicus, revealed by variations among rDNA, mtDNA and the Sry gene. Zool. Sci. 14, 167-173.
34. Suzuki, H., Tsuchiya, K., Takezaki, N., 2000. A molecular phylogenetic framework for the Ryukyu endemic rodents Tokudaia osimensis and Diplothrix legata (Rodentia, Mammalia). Mol. Phylogenet. Evol. 15, 15-24.
35. Swofford, D.L., 2001. PAUP*. Phylogenetic Analysis Using Parsimony (*and other methods), Version 4.068. Sinauer, Sunderland, MA.
36. Swofford, D.L., Olsen, G.J., 1990. Phylogenetic reconstruction. In: Hills, D.M., Moritz, C. (Eds.), Molecular Systematics. Sinauer, Sunderland, MA, pp. 411-501.
37. Tsuchiya, K., Suzuki, H., Shinohara, A., Harada, M., Wakana, S., Sakaizumi, M., Han, S.H., Lin, L.H., Kryukov, A.P., 2000. Molecular phylogeny of East Asian moles inferred from the sequence variation of the mitochondrial cytochrome b gene. Genes Genet. Syst. 75, 17-24.
38. Whidden, H.P., 1999. The evolution of locomotor specializations in moles. Am. Zool. 39, 135.
39. Whidden, H.P., 2000. Comparative myology of moles and the phylogeny of the Talpidae (Mammalia, Lipotyphla). Am. Museum Novitates 3294, 1-53.
40. Yates, T.L., 1984. Insectivores, elephant shrews, tree shrews, and dermopterans. In: Anderson, S.Jones Jr., J.K. (Eds.), Orders and Families of Recent Mammals of the World. Wiley Press, New York, pp. 117-144.
41. Yates, T.L., Greenbaum, I.F., 1982. Biochemical systematics of North American moles (Insectivora; Talpidae). J. Mammal. 63, 368-374.
42. Yates, T.L., Moore, D.W., 1990. Speciation and evolution in the family Talpidae (Mammalia: Insectivora). In: Nevo, E., Reig, O.A. (Eds.), Evolution of Subterranean Mammals at the Organismal and Molecular Levels. Alan R Liss, New York, pp. 1-22.
43. Ziegler, A.C., 1971. Dental homologies and possible relationships of recent Talpidae. J. Mammal. 52, 50-68.