Characterization of Genetic Differences between Mycobacterium avium subsp. paratuberculosis Type I and Type II Isolates

Journal of Clinical Microbiology

Volumn 41, Issue 11, 2003, Pages 5215-5223

  Dohmann, Karen ^a   Strommenger, Birgit ^a,f   Stevenson, Karen ^b   De Juan, Lucía ^d   Stratmann, Janin ^a   Kapur, Vivek ^e   Bull, Tim J ^c   Gerlach, Gerald Friedrich ^a  

^a UNIVERSITY OF VETERINARY MEDICINE HANNOVER   (Germany)

^b MOREDUN RESEARCH INSTITUTE   (United Kingdom)

^c ST GEORGE'S UNIVERSITY OF LONDON   (United Kingdom)

^d UNIVERSIDAD COMPLUTENSE DE MADRID   (Spain)

^e UNIVERSITY OF MINNESOTA   (United States)

^f ROBERT KOCH INSTITUTE   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

AMPICILLIN; KANAMYCIN;

ANIMAL CELL; ARTICLE; BACTERIUM ISOLATION; CATTLE; CELL SPECIFICITY; CELL TYPE; CONTROLLED STUDY; DNA DETERMINATION; DNA SEQUENCE; GENE INSERTION; GENE LOCUS; GENE TRANSFER; GENETIC ANALYSIS; GENETIC DIFFERENCE; HYPOTHESIS; ISOLATION PROCEDURE; MYCOBACTERIUM AVIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SHEEP;

ANIMALS; BASE SEQUENCE; DNA PRIMERS; DNA, BACTERIAL; MYCOBACTERIUM PARATUBERCULOSIS; PARATUBERCULOSIS; POLYMERASE CHAIN REACTION;

ANIMALIA; BACTERIA (MICROORGANISMS); BOS TAURUS; BOVINAE; INSERTION SEQUENCES; MYCOBACTERIUM; MYCOBACTERIUM AVIUM; MYCOBACTERIUM AVIUM SUBSP. AVIUM; MYCOBACTERIUM AVIUM SUBSP. PARATUBERCULOSIS; OVIS ARIES; PROKARYOTA;

EID: 0242509109     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.41.11.5215-5223.2003     Document Type: Article

References (31)

1. Altschul, S. F., T. L. Madden, A. A. Schaffer, J. H. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
2. Barre, F. X., M. Aroyo, S. D. Colloms, A. Helfrich, F. Cornet, and D. J. Sherratt. 2000. FtsK functions in the processing of a Holliday junction intermediate during bacterial chromosome segregation. Genes Dev. 14:2976-2988.
3. Begg, K. J., S. J. Dewar, and W. D. Donachie. 1995. A new Escherichia coli cell division gene, ftsK. J. Bacteriol. 177:6211-6222.
4. Boyle, D. S., D. Grant, G. C. Draper, and W. D. Donachie. 2000. All major regions of FtsK are required for resolution of chromosome dimers. J. Bacteriol. 182:4124-4127.
5. Bull, T. J., J. Hermon-Taylor, I. Pavlik, F. El Zaatari, and M. Tizard. 2000. Characterization of IS900 loci in Mycobacterium avium subsp. paratuberculosis and development of multiplex PCR typing. Microbiology 146:2185-2197.
6. Chamberlin, W., D. Y. Graham, K. Hulten, H. M. El Zimaity, M. R. Schwartz, S. Naser, I. Shafran, and F. A. El Zaatari. 2001. Review article: Mycobacterium avium subsp. paratuberculosis as one cause of Crohn's disease. Aliment. Pharmacol. Ther. 15:337-346.
7. Chitale, S., S. Ehrt, I. Kawamura, T. Fujimura, N. Shimono, N. Anand, S. W. Lu, L. Cohen-Gould, and L. W. Riley. 2001. Recombinant Mycobacterium tuberculosis protein associated with mammalian cell entry. Cell. Microbiol. 3:247-254.
8. Collins, D. M., M. De Zoete, and S. M. Cavaignac. 2002. Mycobacterium avium subsp. paratuberculosis strains from cattle and sheep can be distinguished by a PCR test based on a novel DNA sequence difference. J. Clin. Microbiol. 40:4760-4762.
9. De Voss, J. J., K. Rutter, B. G. Schroeder, and C. E. Barry III. 1999. Iron acquisition and metabolism by mycobacteria. J. Bacteriol. 181:4443-4451.
10. Doran, T. J., J. K. Davies, A. J. Radford, and A. L. Hodgson. 1994. Putative functional domain within ORF2 on the Mycobacterium insertion sequences IS900 and IS902. Immunol. Cell Biol. 72:427-434.
11. El Zaatari, F. A., M. S. Osato, and D. Y. Graham. 2001. Etiology of Crohn's disease: the role of Mycobacterium avium subsp. paratuberculosis. Trends Mol. Med. 7:247-252.
12. Green, E. P., M. L. Tizard, M. T. Moss, J. Thompson, D. J. Winterbourne, J. J. McFadden, and J. Hermon-Taylor. 1989. Sequence and characteristics of IS900, an insertion element identified in a human Crohn's disease isolate of Mycobacterium paratuberculosis. Nucleic Acids Res. 17:9063-9073.
13. Harris, N. B., and R. G. Barletta. 2001. Mycobacterium avium subsp. paratuberculosis in veterinary medicine. Clin. Microbiol. Rev. 14:489-512.
14. Imaeda, T., G. Broslawski, and S. Imaeda. 1988. Genomic relatedness among mycobacterial species by nonisotopic blot hybridization. Int. J. Syst. Bacteriol. 38:151-156.
15. Johnston, W. S., and G. K. MacLachlan. 1986. Johne's disease in sheep. Vet. Rec. 7:75.
16. Kreeger, J. M. 1991. Ruminant paratuberculosis - a century of progress and frustration. J. Vet. Diagn. Investig. 3:373-382.
17. Kunze, Z. M., S. Wall, R. Appelberg, M. T. Silva, F. Portaels, and J. J. McFadden. 1991. IS901, a new member of a widespread class of atypical insertion sequences, is associated with pathogenicity in Mycobacterium avium. Mol. Microbiol. 5:2265-2272.
18. Lisitsyn, N., N. Lisitsyn, and M. Wigler. 1993. Cloning the differences between two complex genomes. Science 259:946-951.
19. Marsh, I., R. Whittington, and D. Cousins. 1999. PCR-restriction endonuclease analysis for identification and strain typing of Mycobacterium avium subsp. paratuberculosis and Mycobacterium avium subsp. avium based on polymorphisms in IS1311. Mol. Cell Probes 13:115-126.
20. McFadden, J. J., P. D. Butcher, R. Chiodini, and J. Hermon-Taylor. 1987. Crohn's disease-isolated mycobacteria are identical to Mycobacterium paratuberculosis, as determined by DNA probes that distinguish between mycobacterial species. J. Clin. Microbiol. 25:796-801.
21. Nielsen, K., and P. Ahrens. 2002. Putative in vitro expressed gene fragments unique to Mycobacterium avium subspecies paratuberculosis. FEMS Microbiol. Lett. 214:199-203.
22. Parker, S. L., Y. L. Tsai, and C. J. Palmer. 1995. Comparison of PCR-generated fragments of the mce gene from Mycobacterium tuberculosis, Mycobacterium avium, Mycobacterium intracellulare, and Mycobacterium scrofulaceum. Clin. Diagn. Lab. Immunol. 2:770-775.
23. Poupart, P., M. Coene, H. Van Heuverswyn, and C. Cocito. 1993. Preparation of a specific RNA probe for detection of Mycobacterium paratuberculosis and diagnosis of Johne's disease. J. Clin. Microbiol. 31:1601-1605.
24. Power, S. B., J. Haagsma, and D. P. Smyth. 1993. Paratuberculosis in farmed red deer (Cervus elaphus) in Ireland. Vet. Rec. 132:213-216.
25. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
26. Saxegaard, F., I. Baess, and E. Jantzen. 1988. Characterization of clinical isolates of Mycobacterium paratuberculosis by DNA-DNA hybridization and cellular fatty acid analysis. Acta Pathol. Microbiol. Immunol. Scand. 96:497-502.
27. Stevenson, K., V. M. Hughes, L. de Juan, N. F. Inglis, F. Wright, and J. M. Sharp. 2002. Molecular characterization of pigmented and nonpigmented isolates of Mycobacterium avium subsp. paratuberculosis. J. Clin. Microbiol. 40:1798-1804.
28. Stratmann, J., B. Strommenger, K. Stevenson, and G. F. Gerlach. 2002. Development of a peptide-mediated capture PCR for detection of Mycobacterium avium subsp. paratuberculosis in milk. J. Clin. Microbiol. 40:4244-4250.
29. Strommenger, B., K. Stevenson, and G. F. Gerlach. 2001. Isolation and diagnostic potential of ISMav2, a novel insertion sequence-like element from Mycobacterium avium ssp. paratuberculosis. FEMS Microbiol. Lett. 196:31-37.
30. Thorel, M. F., M. Krichevsky, and V. V. Levy-Frebault. 1990. Numerical taxonomy of mycobactin-dependent mycobacteria, emended description of Mycobacterium avium, and description of Mycobacterium avium subsp. avium subsp. nov., Mycobacterium avium subsp. paratuberculosis subsp. nov., and Mycobacterium avium subsp. silvaticum subsp. nov. Int. J. Syst. Bacteriol. 40:254-260.
31. Weber, A., R. Gürke, K. Bauer, and K. Schreyer. 1992. Bacterial studies on the occurrence of Mycobacterium paratuberculosis in fecal samples of zoo ruminants. Berl. Munch. Tierarztl. Wochenschr. 105:161-164.