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Volumn 91, Issue 5, 2003, Pages 510-518

Genetic diversity of nuclear and mitochondrial genomes in Pinus parviflora Sieb. & Zucc. (Pinaceae) populations

Author keywords

Allozyme; Genetic differentiation; Maternal inheritance; Mitochondrial DNA; Phylogeography; RFLP

Indexed keywords

GENETIC VARIATION; MITOCHONDRIAL DNA; PHYLOGEOGRAPHY; POPULATION GENETICS;

EID: 0242493873     PISSN: 0018067X     EISSN: None     Source Type: Journal    
DOI: 10.1038/sj.hdy.6800349     Document Type: Article
Times cited : (22)

References (53)
  • 1
    • 0031821105 scopus 로고    scopus 로고
    • RAPD markers of mitochondrial origin exhibit lower population diversity and higher differentiation than RAPDs of nuclear origin in Douglas fir
    • Aagaard JE, Krutovskii KV, Strauss SH (1998). RAPD markers of mitochondrial origin exhibit lower population diversity and higher differentiation than RAPDs of nuclear origin in Douglas fir. Mol Ecol 7: 801-812.
    • (1998) Mol Ecol , vol.7 , pp. 801-812
    • Aagaard, J.E.1    Krutovskii, K.V.2    Strauss, S.H.3
  • 2
    • 0002314270 scopus 로고
    • Genetic, evolutionary consequences of small population size in plants: Implication for conservation
    • Falk DA, Holsinger KE (eds) Oxford University Press: New York, USA
    • Barrett SH, Kohn JR (1991). Genetic, evolutionary consequences of small population size in plants: implication for conservation. In: Falk DA, Holsinger KE (eds) Genetics and Conservation of Rare Plants. Oxford University Press: New York, USA. pp 3-30.
    • (1991) Genetics and Conservation of Rare Plants , pp. 3-30
    • Barrett, S.H.1    Kohn, J.R.2
  • 3
    • 0002564071 scopus 로고
    • Evolution and variation in plant chloroplast and mitochondrial genomes
    • Gottlieb LD, Jain SK (eds) Chapman & Hall: New York, USA
    • Birky CW (1988). Evolution and variation in plant chloroplast and mitochondrial genomes. In: Gottlieb LD, Jain SK (eds) Plant Evolutionary Biology. Chapman & Hall: New York, USA. pp 25-53.
    • (1988) Plant Evolutionary Biology , pp. 25-53
    • Birky, C.W.1
  • 4
    • 0024535552 scopus 로고
    • Organelle gene diversity under migration, mutation, and drift: Equilibrium expectations, approach to equilibrium, effects of heteroplasmic cells, and comparison to nuclear genes
    • Birky CW, Fuerst P, Maruyama T (1989). Organelle gene diversity under migration, mutation, and drift: equilibrium expectations, approach to equilibrium, effects of heteroplasmic cells, and comparison to nuclear genes. Genetics 121: 613-627.
    • (1989) Genetics , vol.121 , pp. 613-627
    • Birky, C.W.1    Fuerst, P.2    Maruyama, T.3
  • 6
    • 0029240502 scopus 로고
    • A set of universal primers for amplification of polymorphic non-coding regions of mitochondrial and chloroplast DNA in plants
    • Demesure B, Sodzi N, Petit RJ (1995). A set of universal primers for amplification of polymorphic non-coding regions of mitochondrial and chloroplast DNA in plants. Mol Ecol 4: 129-131.
    • (1995) Mol Ecol , vol.4 , pp. 129-131
    • Demesure, B.1    Sodzi, N.2    Petit, R.J.3
  • 7
    • 0000937540 scopus 로고
    • Taxonomic and population differentiation of mitochondrial diversity in Pinus banksiana and Pinus contorta
    • Dong J, Wagner DB (1993). Taxonomic and population differentiation of mitochondrial diversity in Pinus banksiana and Pinus contorta. Theor Appl Genet 86: 573-578.
    • (1993) Theor Appl Genet , vol.86 , pp. 573-578
    • Dong, J.1    Wagner, D.B.2
  • 8
    • 0031658011 scopus 로고    scopus 로고
    • Association between chloroplast and mitochondrial lineages in oaks
    • Dumolin-Lapègue S, Pemonge M-H, Petit RJ (1998). Association between chloroplast and mitochondrial lineages in oaks. Mol Biol Evol 15: 1321-1331.
    • (1998) Mol Biol Evol , vol.15 , pp. 1321-1331
    • Dumolin-Lapègue, S.1    Pemonge, M.-H.2    Petit, R.J.3
  • 9
    • 0002163545 scopus 로고
    • Increased number of alleles found in hybrid populations due to intragenic recombination
    • Golding GB, Strobeck C (1983). Increased number of alleles found in hybrid populations due to intragenic recombination. Evolution 37: 17-29.
    • (1983) Evolution , vol.37 , pp. 17-29
    • Golding, G.B.1    Strobeck, C.2
  • 10
    • 85007320774 scopus 로고
    • FSTAT. Vers. 1.2. A computer program to calculate F-statistics
    • Goudet J (1995). FSTAT. Vers. 1.2. A computer program to calculate F-statistics. J Hered 86: 485-486.
    • (1995) J Hered , vol.86 , pp. 485-486
    • Goudet, J.1
  • 12
    • 0029589306 scopus 로고
    • The molecular mechanism underlying the 'rare allele phenomenon' in a subspecific hybrid zone of the California field mouse, Peromyscus californicus
    • Hoffman SM, Brown WM (1995). The molecular mechanism underlying the 'rare allele phenomenon' in a subspecific hybrid zone of the California field mouse, Peromyscus californicus. J Mol Evol 41: 1165-1169.
    • (1995) J Mol Evol , vol.41 , pp. 1165-1169
    • Hoffman, S.M.1    Brown, W.M.2
  • 13
    • 85011165209 scopus 로고
    • On the various forms of Pinus pumila and other northern Japanese soft pines with special reference to their distribution (V)
    • in Japanese
    • Isii S (1941). On the various forms of Pinus pumila and other northern Japanese soft pines with special reference to their distribution (V). J Jpn For Soc 23: 107-114 (in Japanese).
    • (1941) J Jpn for Soc , vol.23 , pp. 107-114
    • Isii, S.1
  • 15
    • 0030794667 scopus 로고    scopus 로고
    • A comparison of population differentiation across four classes of gene marker in limber pine (Pinus flexilis James)
    • Latta RG, Mitton JB (1997). A comparison of population differentiation across four classes of gene marker in limber pine (Pinus flexilis James). Genetics 146: 1153-1163.
    • (1997) Genetics , vol.146 , pp. 1153-1163
    • Latta, R.G.1    Mitton, J.B.2
  • 16
    • 77049129543 scopus 로고
    • Some methods of estimating the inbreeding coefficient
    • Li CC, Horvitz DG (1953). Some methods of estimating the inbreeding coefficient. Am J Hum Genet 5: 107-117.
    • (1953) Am J Hum Genet , vol.5 , pp. 107-117
    • Li, C.C.1    Horvitz, D.G.2
  • 17
    • 0032145518 scopus 로고    scopus 로고
    • Usefulness of molecular markers for detecting population bottlenecks via monitering genetic change
    • Luikart G, Sherwin WB, Steele BM, Allendorf FW (1998). Usefulness of molecular markers for detecting population bottlenecks via monitering genetic change. Mol Ecol 7: 963-974.
    • (1998) Mol Ecol , vol.7 , pp. 963-974
    • Luikart, G.1    Sherwin, W.B.2    Steele, B.M.3    Allendorf, F.W.4
  • 20
    • 0004051017 scopus 로고
    • The Ronald Press Company: New York
    • Mirov NT (1967). The Genus Pinus. The Ronald Press Company: New York.
    • (1967) The Genus Pinus
    • Mirov, N.T.1
  • 21
    • 0033997944 scopus 로고    scopus 로고
    • Glacial refugia of limber pine (Pinus flexilis James) inferred from the population structure of mitochondria DNA
    • Mitton JB, Kreiser BR, Latta RG (2000). Glacial refugia of limber pine (Pinus flexilis James) inferred from the population structure of mitochondria DNA. Mol Ecol 9: 91-97.
    • (2000) Mol Ecol , vol.9 , pp. 91-97
    • Mitton, J.B.1    Kreiser, B.R.2    Latta, R.G.3
  • 23
    • 0018412376 scopus 로고
    • Is intergenic recombination a factor in the maintenance of genetic variation in natural populations?
    • Morgan K, Strobeck C (1979). Is intergenic recombination a factor in the maintenance of genetic variation in natural populations? Nature 277: 383-384.
    • (1979) Nature , vol.277 , pp. 383-384
    • Morgan, K.1    Strobeck, C.2
  • 24
    • 0019321718 scopus 로고
    • Rapid isolation of high molecular weight plant DNA
    • Murray MG, Thompson WF (1980). Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res 8: 4321-4325.
    • (1980) Nucleic Acids Res , vol.8 , pp. 4321-4325
    • Murray, M.G.1    Thompson, W.F.2
  • 25
    • 0001549401 scopus 로고
    • Paternal inheritance of chloroplast DNA and maternal inheritance of mitochondrial DNA in loblolly pine
    • Neale DB, Sederoff RR (1989). Paternal inheritance of chloroplast DNA and maternal inheritance of mitochondrial DNA in loblolly pine. Theor Appl Genet 77: 212-216.
    • (1989) Theor Appl Genet , vol.77 , pp. 212-216
    • Neale, D.B.1    Sederoff, R.R.2
  • 26
    • 0006919926 scopus 로고
    • Analysis of gene diversity in subdivided populations
    • Nei M (1973). Analysis of gene diversity in subdivided populations. Proc Natl Acad Sci USA 70: 3321-3323.
    • (1973) Proc Natl Acad Sci USA , vol.70 , pp. 3321-3323
    • Nei, M.1
  • 27
    • 0020954623 scopus 로고
    • Estimation of fixation indices and gene diversities
    • Nei M, Chesser RK (1983). Estimation of fixation indices and gene diversities. Ann Hum Genet 47: 253-259.
    • (1983) Ann Hum Genet , vol.47 , pp. 253-259
    • Nei, M.1    Chesser, R.K.2
  • 28
    • 0016629918 scopus 로고
    • The bottleneck effect and genetic variability in populations
    • Nei M, Maruyama T, Chakraborty R (1975). The bottleneck effect and genetic variability in populations. Evolution 29: 1-10.
    • (1975) Evolution , vol.29 , pp. 1-10
    • Nei, M.1    Maruyama, T.2    Chakraborty, R.3
  • 29
    • 0020965531 scopus 로고
    • Accuracy of estimated phylogenetic trees from molecular data
    • Nei M, Tajima F, Tateno Y (1983). Accuracy of estimated phylogenetic trees from molecular data. J Mol Evol 19: 153-170.
    • (1983) J Mol Evol , vol.19 , pp. 153-170
    • Nei, M.1    Tajima, F.2    Tateno, Y.3
  • 31
    • 0004172124 scopus 로고
    • Shibundo: Tokyo, (in Japanese)
    • Ohwi J (1978). Flora of Japan. Shibundo: Tokyo, (in Japanese).
    • (1978) Flora of Japan
    • Ohwi, J.1
  • 33
    • 0001870491 scopus 로고
    • Mitochondrial DNA in plant systematics: Applications and limitations
    • Solitis PS, Solitis DE, Doyle JJ (eds) Chapman & Hall: New York, USA
    • Palmer JD (1992). Mitochondrial DNA in plant systematics: applications and limitations. In: Solitis PS, Solitis DE, Doyle JJ (eds) Molecular Systematics of Plants. Chapman & Hall: New York, USA. pp 36-49.
    • (1992) Molecular Systematics of Plants , pp. 36-49
    • Palmer, J.D.1
  • 34
    • 0027143461 scopus 로고
    • Finite island model for organelle and nuclear genes in plants
    • Petit RJ, Kremer A, Wagner DB (1993). Finite island model for organelle and nuclear genes in plants. Heredity 71: 630-641.
    • (1993) Heredity , vol.71 , pp. 630-641
    • Petit, R.J.1    Kremer, A.2    Wagner, D.B.3
  • 35
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 36
    • 0033096344 scopus 로고    scopus 로고
    • Extensive mitochondrial introgression from Pinus pumila to P. parviflora var. pentaphylla (Pinaceae)
    • Senjo M, Kimura K, Watano Y, Ueda K, Shimizu T (1999). Extensive mitochondrial introgression from Pinus pumila to P. parviflora var. pentaphylla (Pinaceae). J Plant Res 112: 97-105.
    • (1999) J Plant Res , vol.112 , pp. 97-105
    • Senjo, M.1    Kimura, K.2    Watano, Y.3    Ueda, K.4    Shimizu, T.5
  • 37
    • 33847472063 scopus 로고
    • High levels of population differentiation for mitochondrial DNA haplotypes in Pinus radiata, muricata and attenuata
    • Strauss SH, Hong Y-P, Hipkins VD (1993). High levels of population differentiation for mitochondrial DNA haplotypes in Pinus radiata, muricata and attenuata. Theor Appl Genet 86: 605-611.
    • (1993) Theor Appl Genet , vol.86 , pp. 605-611
    • Strauss, S.H.1    Hong, Y.-P.2    Hipkins, V.D.3
  • 38
    • 0001765109 scopus 로고
    • ST statistics in the infinite island model
    • ST statistics in the infinite island model. Genetics 107: 501-504.
    • (1984) Genetics , vol.107 , pp. 501-504
    • Takahata, N.1    Nei, M.2
  • 40
    • 0020425129 scopus 로고
    • Cryptomeria japonica, glacial refugia and late-glacial and postglacial migration
    • Tsukada M (1982). Cryptomeria japonica, glacial refugia and late-glacial and postglacial migration. Ecology 63: 1091-1105.
    • (1982) Ecology , vol.63 , pp. 1091-1105
    • Tsukada, M.1
  • 41
    • 0000900679 scopus 로고
    • Genetic structure of geographical marginal populations of Cryptomeria japonica
    • Tsumura Y, Ohba K (1993). Genetic structure of geographical marginal populations of Cryptomeria japonica. Can J For Res 23: 859-863.
    • (1993) Can J for Res , vol.23 , pp. 859-863
    • Tsumura, Y.1    Ohba, K.2
  • 42
    • 0031660725 scopus 로고    scopus 로고
    • Differentiation of mitochondrial DNA polymorphisms in populations of five Japanese Abies species
    • Tsumura Y, Suyama Y (1998). Differentiation of mitochondrial DNA polymorphisms in populations of five Japanese Abies species. Evolution 52: 1031-1042.
    • (1998) Evolution , vol.52 , pp. 1031-1042
    • Tsumura, Y.1    Suyama, Y.2
  • 44
    • 0028189108 scopus 로고
    • Hybridization and chloroplast DNA variation in a Pinus species complex from Asia
    • Wang X-R, Szmidt AE (1994). Hybridization and chloroplast DNA variation in a Pinus species complex from Asia. Evolution 48: 1020-1031.
    • (1994) Evolution , vol.48 , pp. 1020-1031
    • Wang, X.-R.1    Szmidt, A.E.2
  • 45
    • 34249757590 scopus 로고
    • Chloroplast DNA typing by PCR-SSCP in the Pinus pumila-P. parviflora var. pentaphylla complex (Pinaceae)
    • Watano Y, Imazu M, Shimizu T (1995). Chloroplast DNA typing by PCR-SSCP in the Pinus pumila-P. parviflora var. pentaphylla complex (Pinaceae). J Plant Res 108: 493-499.
    • (1995) J Plant Res , vol.108 , pp. 493-499
    • Watano, Y.1    Imazu, M.2    Shimizu, T.3
  • 46
    • 0030529538 scopus 로고    scopus 로고
    • Spatial distribution of cpDNA and mtDNA haplotypes in a hybrid zone between Pinus pumila and P. parviflora var. pentaphylla (Pinaceae)
    • Watano Y, Imazu M, Shimizu T (1996). Spatial distribution of cpDNA and mtDNA haplotypes in a hybrid zone between Pinus pumila and P. parviflora var. pentaphylla (Pinaceae). J Plant Res 109: 403-408.
    • (1996) J Plant Res , vol.109 , pp. 403-408
    • Watano, Y.1    Imazu, M.2    Shimizu, T.3
  • 47
    • 0001986842 scopus 로고
    • Visualization, interpretation of plant isozymes
    • Soltis DE, Soltis PS (eds) Dioscorides Press: Portland, OR, USA
    • Weeden CR, Wendel JF (1989). Visualization, interpretation of plant isozymes. In: Soltis DE, Soltis PS (eds) Isozymes in Plant Biology. Dioscorides Press: Portland, OR, USA. pp 5-45.
    • (1989) Isozymes in Plant Biology , pp. 5-45
    • Weeden, C.R.1    Wendel, J.F.2
  • 49
    • 0242556200 scopus 로고
    • Publications of the Arnold Arboretum, no. 8. Cambridge University Press: Cambridge, UK
    • Wilson EH (1916). The conifers and taxa of Japan. Publications of the Arnold Arboretum, no. 8. Cambridge University Press: Cambridge, UK.
    • (1916) The Conifers and Taxa of Japan
    • Wilson, E.H.1
  • 50
    • 0001024012 scopus 로고
    • Isolation by distance
    • Wright S (1943). Isolation by distance. Genetics 28: 114-138.
    • (1943) Genetics , vol.28 , pp. 114-138
    • Wright, S.1
  • 51
    • 0000862605 scopus 로고
    • The interpretation of population structure by F-statistics with special regard to systems of mating
    • Wright S (1965). The interpretation of population structure by F-statistics with special regard to systems of mating. Evolution 19: 395-420.
    • (1965) Evolution , vol.19 , pp. 395-420
    • Wright, S.1
  • 52
    • 0031788433 scopus 로고    scopus 로고
    • Abundant mitochondrial genome diversity, population differentiation and convergent evolution in pines
    • Wu J, krutovskii KV, Strauss SH (1998). Abundant mitochondrial genome diversity, population differentiation and convergent evolution in pines. Genetics 150: 1605-1614.
    • (1998) Genetics , vol.150 , pp. 1605-1614
    • Wu, J.1    Krutovskii, K.V.2    Strauss, S.H.3


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