-
1
-
-
0035876407
-
Terminal proteins essential for the replication of linear plasmids and chromosomes in Streptomyces
-
Bao, K., and S. N. Cohen. 2001. Terminal proteins essential for the replication of linear plasmids and chromosomes in Streptomyces. Genes Dev. 15:1518-1527.
-
(2001)
Genes Dev.
, vol.15
, pp. 1518-1527
-
-
Bao, K.1
Cohen, S.N.2
-
2
-
-
0025879642
-
Gyrase-dependent stabilization of pSC101 plasmid inheritance by transcriptionally active promoters
-
Beaucage, S. L., C. A. Miller, and S. N. Cohen. 1991. Gyrase-dependent stabilization of pSC101 plasmid inheritance by transcriptionally active promoters. EMBO J. 10:2583-2588.
-
(1991)
EMBO J.
, vol.10
, pp. 2583-2588
-
-
Beaucage, S.L.1
Miller, C.A.2
Cohen, S.N.3
-
3
-
-
0021710537
-
The relationship between base composition and codon usage in bacterial genes and its use for the simple and reliable identification of protein-coding sequences
-
Bibb, M. J., P. R. Findlay, and M. W. Johnson. 1984. The relationship between base composition and codon usage in bacterial genes and its use for the simple and reliable identification of protein-coding sequences. Gene 30:157-166.
-
(1984)
Gene
, vol.30
, pp. 157-166
-
-
Bibb, M.J.1
Findlay, P.R.2
Johnson, M.W.3
-
4
-
-
0027930540
-
Bidirectional replication from an internal origin in a linear Streptomyces plasmid
-
Chang, P. C., and S. N. Cohen. 1994. Bidirectional replication from an internal origin in a linear Streptomyces plasmid. Science 265:952-954.
-
(1994)
Science
, vol.265
, pp. 952-954
-
-
Chang, P.C.1
Cohen, S.N.2
-
5
-
-
0029847583
-
Streptomyces linear plasmids that contain a phage-like, centrally located, replication origin
-
Chang, P. C., E. S. Kim, and S. N. Cohen. 1996. Streptomyces linear plasmids that contain a phage-like, centrally located, replication origin. Mol. Microbiol. 22:789-800.
-
(1996)
Mol. Microbiol.
, vol.22
, pp. 789-800
-
-
Chang, P.C.1
Kim, E.S.2
Cohen, S.N.3
-
6
-
-
0028901438
-
Effects of the pSC101 partition (par) locus on in vivo DNA supercoiling near the plasmid replication origin
-
Conley, D. L., and S. N. Cohen. 1995. Effects of the pSC101 partition (par) locus on in vivo DNA supercoiling near the plasmid replication origin. Nucleic Acids Res. 23:701-707.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 701-707
-
-
Conley, D.L.1
Cohen, S.N.2
-
7
-
-
0036275577
-
Cloning and analysis of the telomere and terminal inverted repeat of the linear chromosome of Streptomyces griseus
-
Goshi, K., T. Uchida, A. Lezhava, M. Yamasaki, K. Hiratsu, H. Shinkawa, and H. Kinashi. 2002. Cloning and analysis of the telomere and terminal inverted repeat of the linear chromosome of Streptomyces griseus. J. Bacteriol. 184:3411-3415.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 3411-3415
-
-
Goshi, K.1
Uchida, T.2
Lezhava, A.3
Yamasaki, M.4
Hiratsu, K.5
Shinkawa, H.6
Kinashi, H.7
-
8
-
-
0027194505
-
Transfer functions of the conjugative integrating element pSAM2 from Streptomyces ambofaciens: Characterization of a kil-kor system associated with transfer
-
Hagège, J., J. L. Pernodet, G. Sezonov, C. Gerbaud, A. Friedmann, and M. Guerineau. 1993. Transfer functions of the conjugative integrating element pSAM2 from Streptomyces ambofaciens: characterization of a kil-kor system associated with transfer. J. Bacteriol. 175:5529-5538.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 5529-5538
-
-
Hagège, J.1
Pernodet, J.L.2
Sezonov, G.3
Gerbaud, C.4
Friedmann, A.5
Guerineau, M.6
-
9
-
-
0021419168
-
A linear DNA plasmid from Streptomyces rochei with an inverted terminal repetition of 614 base pairs
-
Hirochika, H., K. Nakamura, and K. Sakaguchi. 1984. A linear DNA plasmid from Streptomyces rochei with an inverted terminal repetition of 614 base pairs. EMBO J. 3:761-766.
-
(1984)
EMBO J.
, vol.3
, pp. 761-766
-
-
Hirochika, H.1
Nakamura, K.2
Sakaguchi, K.3
-
10
-
-
0020072055
-
Analysis of linear plasmids isolated from Streptomyces: Association of protein with the ends of the plasmid DNA
-
Hirochika, H., and K. Sakaguchi. 1982. Analysis of linear plasmids isolated from Streptomyces: association of protein with the ends of the plasmid DNA. Plasmid 7:59-65.
-
(1982)
Plasmid
, vol.7
, pp. 59-65
-
-
Hirochika, H.1
Sakaguchi, K.2
-
11
-
-
0037346363
-
Linear plasmid SLP2 of Streptomyces lividans is a composite replicon
-
Huang, C. H., C. Y. Chen, H. H. Tsai, C. Chen, Y. S. Lin, and C. W. Chen. 2003. Linear plasmid SLP2 of Streptomyces lividans is a composite replicon. Mol. Microbiol. 47:1563-1576.
-
(2003)
Mol. Microbiol.
, vol.47
, pp. 1563-1576
-
-
Huang, C.H.1
Chen, C.Y.2
Tsai, H.H.3
Chen, C.4
Lin, Y.S.5
Chen, C.W.6
-
12
-
-
0031835535
-
The telomeres of Streptomyces chromosomes contain conserved palindromic sequences with potential to form complex secondary structures
-
Huang, C. H., Y. S. Lin, Y. L. Yang, S. W. Huang, and C. W. Chen. 1998. The telomeres of Streptomyces chromosomes contain conserved palindromic sequences with potential to form complex secondary structures. Mol. Microbiol. 28:905-916.
-
(1998)
Mol. Microbiol.
, vol.28
, pp. 905-916
-
-
Huang, C.H.1
Lin, Y.S.2
Yang, Y.L.3
Huang, S.W.4
Chen, C.W.5
-
13
-
-
0034607556
-
Architecture of the Streptomyces lividans DnaA protein-replication origin complexes
-
Jakimowicz, D., J. Majkadagger, G. Konopa, G. Wegrzyn, W. Messer, H. Schrempf, and J. Zakrzewska-Czerwinska. 2000. Architecture of the Streptomyces lividans DnaA protein-replication origin complexes. J. Mol. Biol. 298:351-364.
-
(2000)
J. Mol. Biol.
, vol.298
, pp. 351-364
-
-
Jakimowicz, D.1
Majkadagger, J.2
Konopa, G.3
Wegrzyn, G.4
Messer, W.5
Schrempf, H.6
Zakrzewska-Czerwinska, J.7
-
14
-
-
0026333213
-
Regulation and function of the Streptomyces plasmid pSN22 genes involved in pock formation and inviability
-
Kataoka, M., T. Seki, and T. Yoshida. 1991. Regulation and function of the Streptomyces plasmid pSN22 genes involved in pock formation and inviability. J. Bacteriol. 173:7975-7981.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 7975-7981
-
-
Kataoka, M.1
Seki, T.2
Yoshida, T.3
-
15
-
-
0023408584
-
Plasmid transfer in Streptomyces lividans: Identification of a kil-kor system associated with the transfer region of pIJ101
-
Kendall, K. J., and S. N. Cohen. 1987. Plasmid transfer in Streptomyces lividans: identification of a kil-kor system associated with the transfer region of pIJ101. J. Bacteriol. 169:4177-4183.
-
(1987)
J. Bacteriol.
, vol.169
, pp. 4177-4183
-
-
Kendall, K.J.1
Cohen, S.N.2
-
16
-
-
0003869903
-
-
The John Innes Foundation, Norwich, United Kingdom
-
Kieser, T., M. J. Bibb, M. J. Buttner, K. F. Chater, and D. A. Hopwood. 2000. Practical Streptomyces genetics. The John Innes Foundation, Norwich, United Kingdom.
-
(2000)
Practical Streptomyces Genetics
-
-
Kieser, T.1
Bibb, M.J.2
Buttner, M.J.3
Chater, K.F.4
Hopwood, D.A.5
-
17
-
-
0028587692
-
Isolation and characterization of linear plasmids from lankacidin-producing Streptomyces species
-
Kinashi, H., E. Mori, A. Hatani, and O. Nimi. 1994. Isolation and characterization of linear plasmids from lankacidin-producing Streptomyces species. J. Antibiot. (Tokyo) 47:1447-1455.
-
(1994)
J. Antibiot. (Tokyo)
, vol.47
, pp. 1447-1455
-
-
Kinashi, H.1
Mori, E.2
Hatani, A.3
Nimi, O.4
-
18
-
-
0026099988
-
Physical characterization of SCP1, a giant linear plasmid from Streptomyces coelicolor
-
Kinashi, H., and M. Shimaji-Murayama. 1991. Physical characterization of SCP1, a giant linear plasmid from Streptomyces coelicolor. J. Bacteriol. 173:1523-1529.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 1523-1529
-
-
Kinashi, H.1
Shimaji-Murayama, M.2
-
19
-
-
0030724765
-
Instability of artificially circularized chromosomes of Streptomyces lividans
-
Lin, Y. S., and C. W. Chen. 1997. Instability of artificially circularized chromosomes of Streptomyces lividans. Mol. Microbiol. 26:709-719.
-
(1997)
Mol. Microbiol.
, vol.26
, pp. 709-719
-
-
Lin, Y.S.1
Chen, C.W.2
-
20
-
-
0027751336
-
The chromosomal DNA of Streptomyces lividans 66 is linear
-
Lin, Y. S., H. M. Kieser, D. A. Hopwood, and C. W. Chen. 1993. The chromosomal DNA of Streptomyces lividans 66 is linear. Mol. Microbiol. 10:923-933.
-
(1993)
Mol. Microbiol.
, vol.10
, pp. 923-933
-
-
Lin, Y.S.1
Kieser, H.M.2
Hopwood, D.A.3
Chen, C.W.4
-
21
-
-
0028144757
-
Functional evidence that the principal DNA replication origin of the Streptomyces coelicolor chromosome is close to the dnaA-gyrB region
-
Musialowski, M. S., F. Flett, G. B. Scott, G. Hobbs, C. P. Smith, and S. G. Oliver. 1994. Functional evidence that the principal DNA replication origin of the Streptomyces coelicolor chromosome is close to the dnaA-gyrB region. J. Bacteriol. 176:5123-5125.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 5123-5125
-
-
Musialowski, M.S.1
Flett, F.2
Scott, G.B.3
Hobbs, G.4
Smith, C.P.5
Oliver, S.G.6
-
22
-
-
0031832970
-
Replication at the telomeres of the Streptomyces linear plasmid pSLA2
-
Qin, Z., and S. N. Cohen. 1998. Replication at the telomeres of the Streptomyces linear plasmid pSLA2. Mol. Microbiol. 28:893-903.
-
(1998)
Mol. Microbiol.
, vol.28
, pp. 893-903
-
-
Qin, Z.1
Cohen, S.N.2
-
23
-
-
0028346071
-
Development of a gene cloning system for Streptomyces hygroscopicus subsp. yingchengensis, a producer of three useful antifungal compounds, by elimination of three barriers to DNA transfer
-
Qin, Z., K. Peng, X. Zhou, R. Liang, Q. Zhou, H. Chen, D. A. Hopwood, T. Kieser, and Z. Deng. 1994. Development of a gene cloning system for Streptomyces hygroscopicus subsp. yingchengensis, a producer of three useful antifungal compounds, by elimination of three barriers to DNA transfer. J. Bacteriol. 176:2090-2095.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 2090-2095
-
-
Qin, Z.1
Peng, K.2
Zhou, X.3
Liang, R.4
Zhou, Q.5
Chen, H.6
Hopwood, D.A.7
Kieser, T.8
Deng, Z.9
-
24
-
-
0032697384
-
The linear plasmid SCP1 of Streptomyces coelicolor A3(2) possesses a centrally located replication origin and shows significant homology to the transposon Tn4811
-
Redenbach, M., M. Bibb, B. Gust, B. Seitz, and A. Spychaj. 1999. The linear plasmid SCP1 of Streptomyces coelicolor A3(2) possesses a centrally located replication origin and shows significant homology to the transposon Tn4811. Plasmid 42:174-185.
-
(1999)
Plasmid
, vol.42
, pp. 174-185
-
-
Redenbach, M.1
Bibb, M.2
Gust, B.3
Seitz, B.4
Spychaj, A.5
-
25
-
-
0025815855
-
Protein-priming of DNA replication
-
Salas, M. 1991. Protein-priming of DNA replication. Annu. Rev. Biochem. 60:39-71.
-
(1991)
Annu. Rev. Biochem.
, vol.60
, pp. 39-71
-
-
Salas, M.1
-
26
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Ed.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
27
-
-
0026778390
-
Reconstruction of a Streptomyces linear replicon from separately cloned DNA fragments: Existence of a cryptic origin of circular replication within the linear plasmid
-
Shiffman, D., and S. N. Cohen. 1992. Reconstruction of a Streptomyces linear replicon from separately cloned DNA fragments: existence of a cryptic origin of circular replication within the linear plasmid. Proc. Natl. Acad. Sci. USA 89:6129-6133.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 6129-6133
-
-
Shiffman, D.1
Cohen, S.N.2
-
28
-
-
0024441134
-
Identification and analysis of transcriptional regulatory signals for the kil and kor loci of Streptomyces plasmid pIJ101
-
Stein, D. S., K. J. Kendall, and S. N. Cohen. 1989. Identification and analysis of transcriptional regulatory signals for the kil and kor loci of Streptomyces plasmid pIJ101. J. Bacteriol. 171:5768-5775.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 5768-5775
-
-
Stein, D.S.1
Kendall, K.J.2
Cohen, S.N.3
-
29
-
-
0037009372
-
The crystal structure of the quorum sensing protein TraR bound to its autoinducer and target DNA
-
Vannini, A., C. Volpari, C. Gargioli, E. Muraglia, R. Cortese, R. De Francesco, P. Neddermann, and S. D. Marco. 2002. The crystal structure of the quorum sensing protein TraR bound to its autoinducer and target DNA. EMBO J. 21:4393-4401.
-
(2002)
EMBO J.
, vol.21
, pp. 4393-4401
-
-
Vannini, A.1
Volpari, C.2
Gargioli, C.3
Muraglia, E.4
Cortese, R.5
De Francesco, R.6
Neddermann, P.7
Marco, S.D.8
-
30
-
-
0030889639
-
Artificial circularization of the chromosome with concomitant deletion of its terminal inverted repeats enhances genetic instability and genome rearrangement in Streptomyces lividans
-
Volff, J. N., P. Viell, and J. Altenbuchner. 1997. Artificial circularization of the chromosome with concomitant deletion of its terminal inverted repeats enhances genetic instability and genome rearrangement in Streptomyces lividans. Mol. Gen. Genet. 253:753-760.
-
(1997)
Mol. Gen. Genet.
, vol.253
, pp. 753-760
-
-
Volff, J.N.1
Viell, P.2
Altenbuchner, J.3
-
31
-
-
0034046617
-
Fast probabilistic analysis of sequence function using scoring matrices
-
Wu, T. D., C. G. Nevill-Manning, and D. L. Brutlag. 2000. Fast probabilistic analysis of sequence function using scoring matrices. Bioinformatics 16:233-244.
-
(2000)
Bioinformatics
, vol.16
, pp. 233-244
-
-
Wu, T.D.1
Nevill-Manning, C.G.2
Brutlag, D.L.3
-
33
-
-
0036173515
-
The terminal proteins of linear Streptomyces chromosomes and plasmids: A novel class of replication priming proteins
-
Yang, C. C., C. H. Huang, C. Y. Li, Y. G. Tsay, S. C. Lee, and C. W. Chen. 2002. The terminal proteins of linear Streptomyces chromosomes and plasmids: a novel class of replication priming proteins. Mol. Microbiol. 43:297-305.
-
(2002)
Mol. Microbiol.
, vol.43
, pp. 297-305
-
-
Yang, C.C.1
Huang, C.H.2
Li, C.Y.3
Tsay, Y.G.4
Lee, S.C.5
Chen, C.W.6
-
34
-
-
0026772552
-
Characterization of an autonomously replicating region from the Streptomyces lividans chromosome
-
Zakrzewska-Czerwinska, J., and H. Schrempf. 1992. Characterization of an autonomously replicating region from the Streptomyces lividans chromosome. J. Bacteriol. 174:2688-2693.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 2688-2693
-
-
Zakrzewska-Czerwinska, J.1
Schrempf, H.2
-
35
-
-
0024296696
-
Site-specific degradation of Streptomyces lividans DNA during electrophoresis in buffers contaminated with ferrous iron
-
Zhou, X., Z. Deng, J. L. Firmin, D. A. Hopwood, and T. Kieser. 1988. Site-specific degradation of Streptomyces lividans DNA during electrophoresis in buffers contaminated with ferrous iron. Nucleic Acids Res. 16:4341-4352.
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 4341-4352
-
-
Zhou, X.1
Deng, Z.2
Firmin, J.L.3
Hopwood, D.A.4
Kieser, T.5
|