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Volumn 53, Issue SUPPL. 6, 2003, Pages 486-490

Prediction of Protein Structure by Emphasizing Local Side-Chain/Backbone Interactions in Ensembles of Turn Fragments

Author keywords

Boltzmann hypothesis; Fragments; Propensities; Ramachandran map; Secondary structure; Structure prediction; Threading; Turns

Indexed keywords

AMINO ACID;

EID: 0242267506     PISSN: 08873585     EISSN: None     Source Type: Journal    
DOI: 10.1002/prot.10541     Document Type: Conference Paper
Times cited : (28)

References (9)
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    • Shortle, D.1    Ackerman, M.S.2
  • 3
    • 0037137257 scopus 로고    scopus 로고
    • Robustness of the long-range structure in denatured staphylococcal nuclease to changes in sequence
    • Ackerman MS, Shortle D. Robustness of the long-range structure in denatured staphylococcal nuclease to changes in sequence. Biochemistry 2002;41: 13791-13797.
    • (2002) Biochemistry , vol.41 , pp. 13791-13797
    • Ackerman, M.S.1    Shortle, D.2
  • 4
    • 0036136694 scopus 로고    scopus 로고
    • Composites of local structural propensities: Evidence for local encoding of long range structure
    • Shortle D. Composites of local structural propensities: Evidence for local encoding of long range structure. Prot Science 2002;11: 18-26.
    • (2002) Prot Science , vol.11 , pp. 18-26
    • Shortle, D.1
  • 5
    • 0027318317 scopus 로고
    • An empirical energy function for threading protein sequence through the folding motif
    • Bryant SH, Lawrence CE. An empirical energy function for threading protein sequence through the folding motif, Proteins 1993;16: 92-112.
    • (1993) Proteins , vol.16 , pp. 92-112
    • Bryant, S.H.1    Lawrence, C.E.2
  • 6
    • 78149457618 scopus 로고    scopus 로고
    • PISCES: A protein sequence culling server
    • submitted in
    • Wang G, Dunbrack RL Jr. PISCES: a protein sequence culling server. Bioinformatics, submitted in 2002.
    • (2002) Bioinformatics
    • Wang, G.1    Dunbrack R.L., Jr.2
  • 7
    • 0033578684 scopus 로고    scopus 로고
    • Protein secondary structure prediction based on position-specific scoring matrices
    • Jones DT. Protein secondary structure prediction based on position-specific scoring matrices. J Mol Biol 1999;292: 195-202.
    • (1999) J Mol Biol. , vol.292 , pp. 195-202
    • Jones, D.T.1
  • 8
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    • Improved methods for building protein models in electron density maps and the location of errors in these models
    • Jones TA, Zou JY, Cowan SW, Kjeldgaard M. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr A 1991;47: 110-119.
    • (1991) Acta Crystallogr A , vol.47 , pp. 110-119
    • Jones, T.A.1    Zou, J.Y.2    Cowan, S.W.3    Kjeldgaard, M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.