Molecular phylogenetic relationships between prostanoid-containing Okinawan soft coral (Clavularia viridis) and nonprostanoid-containing Clavularia species based on ribosomal ITS sequences

Marine Biotechnology

Volumn 5, Issue 4, 2003, Pages 401-407

  Fujiwara, Shoko ^a   Yasui, Kazuyuki ^a   Watanabe, Kinzo ^a   Wakabayashi, Takako ^a   Tsuzuki, Mikio ^a   Iguchi, Kazuo ^a  

^a TOKYO UNIVERSITY OF PHARMACY AND LIFE SCIENCES   (Japan)

Author keywords

Clavularia; Clavulones; Prostanoids; rDNA; Soft coral; Symbiodinium

Indexed keywords

CORAL; HOST-SYMBIONT INTERACTION; METABOLITE; PHYLOGENETICS;

ANIMALS; ANTHOZOA; BASE SEQUENCE; CLUSTER ANALYSIS; DINOFLAGELLIDA; DNA, RIBOSOMAL; JAPAN; MOLECULAR SEQUENCE DATA; PHYLOGENY; PROSTAGLANDINS; SEQUENCE ANALYSIS, DNA; SYMBIOSIS;

JAPAN;

ALCYONACEA; ALGAE; ANTHOZOA; CLAVULARIA; CLAVULARIA VIRIDIS; INVERTEBRATA; SYMBIODINIUM;

EID: 0142120619     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-002-0084-z     Document Type: Article

References (32)

1. Bowden, B.F., Coll, J.C., Mitchell, S.J., Raston, C.L., Stokie, G.J., and White, A.H. (1979). Studies of Australian soft corals, 15: the structure of pachyclavulariadiol, a novel furano-diterpene from Pachyclavularia violacea. Aust J Chem 32:2265-2274.
2. Braekman, J.C., Daloze, D., Dupont, A., Tursch, B., Declercq, J.P., Germain, G., and Van Meerssche, M. (1981). Chemical studies of marine invertebrates, 43: novel sesquiterpenes from Clavularia inflata and Clavularia koellikeri (Coelenterata, Octocorallia, Stolonifera). Tetrahedron 37:179-186.
3. Carlos, A.A., Baillie, B.K., Kawachi, M., and Maruyama, T. (1999). Phylogenetic position of Symbiodinium (Dinophyceae) isolates from tridacnids (Bivalvia), cardiids (Bivalvia), a sponge (Porifera), a soft coral (Anthozoa), and a free-living strain. J Phycol 35:1054-1062.
4. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
5. Iguchi, K., Kaneta, S., Mori, K., Yamada, Y., Honda, A., and Mori, Y. (1985). Chlorovulones, new halogenated marine prostanoids with an antitumor activity from the Stolonifer Clavularia viridis Quoy and Gaimard. Tetrahedron Lett 26:5787-5790.
6. Iguchi, K., Iwashima, M., and Watanabe, K. (1995). Clavulolactones, new marine prostanoids with a γ-lactonic moiety in the α-side-chain from the Okinawan soft coral, Clavularia viridis. J Nat Prod 58:790-793.
7. Iwashima, M., Watanabe, K., and Iguchi, K. (1997). New marine prostanoids, preclavulone lactones, from the Okinawan soft coral Clavularia viridis. Tetrahedron Lett 38:8319-8322.
8. Iwashima, M., Okamoto, K., and Iguchi, K. (1999a). Clavirins, a new type of marine oxylipins with growth-inhibitory activity from the Okinawan soft coral, Clavularia viridis. Tetrahedron Lett 40:6455-6459.
9. Iwashima, M., Okamoto, K., Konno, F., and Iguchi, K. (1999b). New marine prostanoids from the Okinawan soft coral, Clavularia viridis. J Nat Prod 62:352-354.
10. Iwashima, M., Okamoto, K., Miyai, Y., and Iguchi, K. (1999c). 4-Epiclavulones, new marine prostanoids from the Okinawan soft coral, Clavularia viridis. Chem Pharm Bull 47:884-886.
11. Iwashima, M., Matsumoto, Y., Takahashi, H., and Iguchi, K. (2000). New marine cembrane-type diterpenoids from the Okinawan soft coral Clavularia koellikeri. J Nat Prod 63:1647-1652.
12. Kikuchi, H., Tsukitani, Y., Iguchi, K., and Yamada, Y. (1982). Clavulones, new type of prostanoids from the Stolonifer Clavularia viridis Quoy and Gaimard. Tetrahedron Lett 23:5171-5174.
13. Kikuchi, H., Tsukitani, Y., Iguchi, K., and Yamada, Y. (1983). Absolute streochemistry of new prostanoids clavulone I, II and III, from Clavularia viridis Quoy and Gaimard. Tetrahedron Lett 24:1549-1552.
14. Kobayashi, M., Son, B.W., Kido, M., Kyogoku, Y., and Kitagawa, I. (1983). Clavukerin A, a new trinor-guaiane sesquiterpene from the Okinawan soft coral Clavularia koellikeri. Chem Pharm Bull 31:2160-2163.
15. Kobayashi, M., Son, B.W., Fujiwara, T., Kyogoku, Y., and Kitagawa, I. (1984a). Neodolabelline, a methyl migrated dolabellane-type diterpene from the Okinawan soft coral Clavularia koellikeri. Tetrahedron Lett 25:5543-5546.
16. Kobayashi, M., Son, B.W., Kyogoku, Y., and Kitagawa, I. (1984b). Clavukerin C, a new trinor-guaiane sesquiterpene having a hydroperoxy function, from the Okinawan soft coral Clavularia koellikeri. Chem Pharm Bull 32:1667-1670.
17. Kobayashi, M., Son, B.W., Kyogoku, Y., and Kitagawa, I. (1986). Kericembrenolides A, B, C, D, and E, five new cytotoxic cembrenolides from the Okinawan soft coral Clavularia koellikeri. Chem Pharm Bull 34:2306-2309.
18. Mori, K., Iguchi, K., Yamada, N., Yamada, Y., and Inouye, Y. (1987). Stolonidiol, a new marine diterpenoid with a strong cytotoxic activity from the Japanese soft coral. Tetrahedron Lett 28:5673-5676.
19. Mori, K., Iguchi, K., Yamada, N., Yamada, Y., and Inouye, Y. (1988). Bioactive marine diterpenoids from Japanese soft coral of Clavularia sp. Chem Pharm Bull 36:2840-2852.
20. Nagaoka, H., Iguchi, K., Miyakosi, T., Yamada, N., and Yamada, Y. (1986). Determination of absolute configuration of chlorovulones by CD measurement and by enantioselective synthesis of (-)-chlorovulone II. Tetrahedron Lett 27:223-226.
21. Rowan, R., and Knowlton, N. (1995). Intraspecific diversity and ecological zonation in coral-algal symbiosis. Proc Natl Acad Sci USA 92:2850-2853.
22. Rowan, R., and Powers, D.A. (1991a). Molecular genetic identification of symbiotic dinoflagellates (zooxanthellae). Mar Ecol Prog Ser 71:65-73.
23. Rowan, R., and Powers, D.A. (1991b). A molecular genetic classification of zooxanthellae and the evolution of animal-algal symbioses. Science 251:1348-1351.
24. Swofford, D.L. (1993). PAUP: Phylogenetic Analysis Using Parsimony, Version 3.1. Washington, D.C.: Smithsonian Institute.
25. Swofford, D.L., and Begle, D.P. (1993). PAUP: Phylogenetic Analysis Using Parsimony, Version 3.1. User's Manual. Washington, D.C.: Smithsonian Institute.
26. Takabayashi, M., Carter, D.A., Loh, W.K.W., and Hoegh-Guldberg, O. (1998). A coral-specific primer for PCR amplification of the internal transcribed spacer region in ribosomal DNA. Mol Ecol 7:928-930.
27. Thompson, J., Gibson, T., and Higgins, D. (1994). CLUSTAL W, Version 1.4. Heidelberg, Germany: European Molecular Biology Laboratory.
28. Uchio, Y., Fukazawa, Y., Bowden, B.F., and Coll, J.C. (1989). New diterpenes from an Australian Pachyclavularia species (Coelenterata, Anthozoa, Octocorallia). Tennen Yuki Kagobutsu Toronkai Koen Youshisyu 31st:548-553 (Chem Abstr 112:175870).
29. Watanabe, K., Iwashima, M., and Iguchi, K. (1996). New marine prostanoid carboxylate salts from the Okinawan soft coral Clavularia viridis. J Nat Prod 59:980-982.
30. Watanabe, M.M., Kasai, F., and Sudo, R. (1988). NIES-Collection List of Strains, 2nd ed., Microalgae and Protozoa. Tsukuba, Japan: Microbial Culture Collection, The National Institute for Environmental Studies, 163.
31. White, T.J., Bruns, T., Lee, S., and Taylor, W.J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR Protocols: A Guide to Methods and Applications, Innis, M.A., Gelfand, D.H., Sninsky, J.J., and White, T.J., (eds.). San Diego, Calif: Academic Press, 315-322.
32. Yasumoto, M., Mada, K., Ooi, T., and Kusumi, T. (2000). New terpenoid components from the volatile oils of the soft corals Clavularia viridis and Sarcophyton acutangulum. J Nat Prod 63:1534-1536.