메뉴 건너뛰기




Volumn 119, Issue 12, 2003, Pages 5965-5980

From ab initio quantum chemistry to molecular dynamics: The delicate case of hydrogen bonding in ammonia

Author keywords

[No Author keywords available]

Indexed keywords

AMMONIA; COMPUTER SIMULATION; HYDROGEN BONDS; MOLECULAR STRUCTURE; PROBABILITY DENSITY FUNCTION;

EID: 0142090209     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.1599338     Document Type: Article
Times cited : (161)

References (152)
  • 1
    • 0033235339 scopus 로고    scopus 로고
    • W. Kohn, Rev. Mod. Phys. 71, 1253 (1999); J. A. Pople, Angew. Chem., Int. Ed. Engl. 38, 1894 (1999); Angew. Chem. 111, 2014 (1999).
    • (1999) Rev. Mod. Phys. , vol.71 , pp. 1253
    • Kohn, W.1
  • 2
    • 0033549476 scopus 로고    scopus 로고
    • W. Kohn, Rev. Mod. Phys. 71, 1253 (1999); J. A. Pople, Angew. Chem., Int. Ed. Engl. 38, 1894 (1999); Angew. Chem. 111, 2014 (1999).
    • (1999) Angew. Chem., Int. Ed. Engl. , vol.38 , pp. 1894
    • Pople, J.A.1
  • 3
    • 0033235339 scopus 로고    scopus 로고
    • W. Kohn, Rev. Mod. Phys. 71, 1253 (1999); J. A. Pople, Angew. Chem., Int. Ed. Engl. 38, 1894 (1999); Angew. Chem. 111, 2014 (1999).
    • (1999) Angew. Chem. , vol.111 , pp. 2014
  • 12
    • 0000135791 scopus 로고
    • M. E. Tuckerman, K. Laasonen, M. Sprik, and M. Parrinello, J. Phys. Chem. 99, 5749 (1995); J. Chem. Phys. 103, 150 (1995).
    • (1995) J. Chem. Phys. , vol.103 , pp. 150
  • 15
    • 0142057630 scopus 로고    scopus 로고
    • P. L. Silvestrelli and M. Parrinello, Phys. Rev. Lett. 82, 3308 (1999); J. Chem. Phys. 111, 3572 (1999).
    • (1999) J. Chem. Phys. , vol.111 , pp. 3572
  • 19
    • 0035424057 scopus 로고    scopus 로고
    • M. Boero, K. Terakura, T. Ikeshoji, C. C. Liew, and M. Parrinello, Phys. Rev. Lett. 85, 3245 (2000); J. Chem. Phys. 115, 2219 (2001).
    • (2001) J. Chem. Phys. , vol.115 , pp. 2219
  • 27
    • 0033199846 scopus 로고    scopus 로고
    • note that the HCTH/120 functional is denoted HCTH-38 in this paper
    • C. Tuma, A. D. Boese, and N. C. Handy, Phys. Chem. Chem. Phys. 1, 3939 (1999), note that the HCTH/120 functional is denoted HCTH-38 in this paper.
    • (1999) Phys. Chem. Chem. Phys. , vol.1 , pp. 3939
    • Tuma, C.1    Boese, A.D.2    Handy, N.C.3
  • 34
    • 0037016451 scopus 로고    scopus 로고
    • T. Steiner, Angew. Chem., Int. Ed. Engl. 41, 48 (2002), Angew. Chem. 114, 50 (2002).
    • (2002) Angew. Chem. , vol.114 , pp. 50
  • 35
    • 0142057629 scopus 로고    scopus 로고
    • note
    • 2 according to Fig. 1(e) is also termed "bifurcated," which we do not do here.
  • 56
    • 0142120906 scopus 로고    scopus 로고
    • note
    • 3 monomers rigid, (ii) solving the remaining six-dimensional vibration-rotation-tunneling problem on a global potential energy surface, and (iii) adjusting some parameters of this ab initio-based potential in order to match the observed far-infrared spectrum (Ref. 42). Note that recent work on the water dimer (Ref. 51) showed that monomer flexibility does play a significant role in determining the vibration-rotation-tunneling spectrum of this dimer. The intramolecular degrees of freedom of the monomers are also expected to play a role in determining the "experimental" structure of the ammonia dimer.
  • 71
    • 36749117119 scopus 로고
    • A. H. Narten, J. Chem. Phys. 49, 1692 (1968); 66, 3117 (1977).
    • (1977) J. Chem. Phys. , vol.66 , pp. 3117
  • 81
    • 0035826667 scopus 로고    scopus 로고
    • T. A. Beu and U. Buck, J. Chem. Phys. 114, 7848 (2001); see also 114, 7853 (2001).
    • (2001) J. Chem. Phys. , vol.114 , pp. 7853
  • 98
    • 0142089363 scopus 로고    scopus 로고
    • see also supplementary material to Ref. 82, EPAPS Document No. E-JCPSA6-301111
    • http://www-theor.ch.cam.ac.uk/people/nch/fit/; see also supplementary material to Ref. 82, EPAPS Document No. E-JCPSA6-301111.
  • 102
    • 0142025672 scopus 로고    scopus 로고
    • note
    • MOLPRO is a package of ab initio programs written by H.-J. Werner and P. J. Knowles, with contributions from J. Almlöf, R. D. Amos, A. Berning et al.
    • Werner, H.-J.1    Knowles, P.J.2
  • 106
    • 36549092221 scopus 로고
    • erratum 89, 3401 (1988)
    • J. Noga and R. J. Bartlett, J. Chem. Phys. 86, 7041 (1987), erratum 89, 3401 (1988).
    • (1987) J. Chem. Phys. , vol.86 , pp. 7041
    • Noga, J.1    Bartlett, R.J.2
  • 107
    • 0142025671 scopus 로고    scopus 로고
    • (1996) ACES II, an ab initio program system, incorporating the MOLECULE vectorized molecular integral program by J. Almlöf and P. R. Taylor, and a modified version of the ABACUS integral derivative package by T. Helgaker, H. J. Aa. Jensen, P. Jørgensen, J. Olsen, and P. R. Taylor
    • J. F. Stanton, J. Gauss, J. D. Watts, W. Lauderdale, and R. J. Bartlett (1996) ACES II, an ab initio program system, incorporating the MOLECULE vectorized molecular integral program by J. Almlöf and P. R. Taylor, and a modified version of the ABACUS integral derivative package by T. Helgaker, H. J. Aa. Jensen, P. Jørgensen, J. Olsen, and P. R. Taylor.
    • Stanton, J.F.1    Gauss, J.2    Watts, J.D.3    Lauderdale, W.4    Bartlett, R.J.5
  • 108
    • 24544463432 scopus 로고
    • S. A. Kucharski and R. J. Bartlett, Chem. Phys. Lett. 158, 550 (1989); K. Raghavachari, J. A. Pople, E. S. Replogle, and M. Head-Gordon, J. Phys. Chem. 94, 5579 (1990).
    • (1989) Chem. Phys. Lett. , vol.158 , pp. 550
    • Kucharski, S.A.1    Bartlett, R.J.2
  • 113
    • 0142089361 scopus 로고    scopus 로고
    • note
    • The Cambridge Analytic Derivatives Package (Cadpac), Issue 6.5, Cambridge (1998). Developed by R. D. Amos with contributions from I. L. Alberts, J. S. Andrews, S. M. Colwell et al.
  • 114
    • 4243553426 scopus 로고
    • A. D. Becke, Phys. Rev. A 38, 3098 (1988); C. Lee, W. Yang, and R. G. Parr, Phys. Rev. B 37, 785 (1988).
    • (1988) Phys. Rev. A , vol.38 , pp. 3098
    • Becke, A.D.1
  • 118
    • 33645898818 scopus 로고
    • J. P. Perdew and Y. Wang, Phys. Rev. B 45, 13244 (1992), J. P. Perdew, J. A. Chevary, S. H. Vosko, K. A. Jackson, M. R. Pederson, D. J. Singh, and C. Fiolhais, ibid. 46, 6671 (1992).
    • (1992) Phys. Rev. B , vol.45 , pp. 13244
    • Perdew, J.P.1    Wang, Y.2
  • 131
    • 0142120905 scopus 로고    scopus 로고
    • note
    • See EPAPS Document No. E-JCPSA6-119-305335 for Tables I-III for different weights in order to determine the HCTH407+ functional to give the correct description of bonding in the ammonia dimer. A direct link to this document may be found in the online article's HTML reference section. The document may also be reached via the EPAPS homepage (http://www.aip.org/pubservs/epaps.html) or from ftp.aip.org in the directory/epaps/. See the EPAPS homepage for more information.
  • 132
    • 0142089360 scopus 로고    scopus 로고
    • note
    • The experimental RDFs that are plotted in Fig. 3 were derived from the diffraction data of Ref. 66 but using a more sophisticated procedure; A. K. Soper (private communication).
  • 134
    • 4243422452 scopus 로고    scopus 로고
    • A. Luzar and D. Chandler, Phys. Rev. Lett. 76, 928 (1996); Nature (London) 379, 53 (1996); A. Luzar, J. Chem. Phys. 113, 10663 (2000).
    • (1996) Phys. Rev. Lett. , vol.76 , pp. 928
    • Luzar, A.1    Chandler, D.2
  • 135
    • 4243422452 scopus 로고    scopus 로고
    • A. Luzar and D. Chandler, Phys. Rev. Lett. 76, 928 (1996); Nature (London) 379, 53 (1996); A. Luzar, J. Chem. Phys. 113, 10663 (2000).
    • (1996) Nature (London) , vol.379 , pp. 53
  • 136
    • 0034504583 scopus 로고    scopus 로고
    • A. Luzar and D. Chandler, Phys. Rev. Lett. 76, 928 (1996); Nature (London) 379, 53 (1996); A. Luzar, J. Chem. Phys. 113, 10663 (2000).
    • (2000) J. Chem. Phys. , vol.113 , pp. 10663
    • Luzar, A.1
  • 137
    • 0035819175 scopus 로고    scopus 로고
    • H. Xu and B. J. Berne, J. Phys. Chem. B 105, 11929 (2001); H. Xu, H. A. Stern, and B. Berne, ibid. 106, 2054 (2002).
    • (2001) J. Phys. Chem. B , vol.105 , pp. 11929
    • Xu, H.1    Berne, B.J.2
  • 140
    • 0034227778 scopus 로고    scopus 로고
    • F. W. Starr, J. K. Nielsen, and H. E. Stanley, Phys. Rev. Lett. 82, 2294 (1999); Phys. Rev. E 62, 579 (2000).
    • (2000) Phys. Rev. E , vol.62 , pp. 579
  • 145
    • 3843096194 scopus 로고
    • F. H. Stillinger, Adv. Chem. Phys. 31, 1 (1975); Science 209, 451 (1980).
    • (1980) Science , vol.209 , pp. 451


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.