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Volumn 85, Issue 1, 2003, Pages 15-25

Rapid and sensitive detection of Rosellinia necatrixin roots and soils by real time scorpion-PCR

Author keywords

ITS regions; Molecular detection; Nested PCR; Quantitative PCR; Real time PCR; White root rot

Indexed keywords

FUNGI; ROSELLINIA; ROSELLINIA NECATRIX; SCORPIONES;

EID: 0141890974     PISSN: 11254653     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (61)

References (48)
  • 4
    • 0141949616 scopus 로고    scopus 로고
    • EPPO Standards - Production of healthy plants for planting
    • Anonymous, 2002. EPPO Standards - Production of healthy plants for planting. EPPO Bulletin 32: 49-53.
    • (2002) EPPO Bulletin , vol.32 , pp. 49-53
  • 5
    • 85005333169 scopus 로고
    • Factors influencing the incidence of Rosellinia necatrix Prill. in poplars
    • Anselmi N., Giorgetti A., 1990. Factors influencing the incidence of Rosellinia necatrix Prill. in poplars. European Journal of Forest Pathology 20: 175-183.
    • (1990) European Journal of Forest Pathology , vol.20 , pp. 175-183
    • Anselmi, N.1    Giorgetti, A.2
  • 6
    • 0037169690 scopus 로고    scopus 로고
    • Presence and distribution of double-stranded RNA elements in the white root rot fungus Rosellinia necatrix
    • Arakawa M., Nakamura H., Uetake Y., Matsumoto N., 2002. Presence and distribution of double-stranded RNA elements in the white root rot fungus Rosellinia necatrix. Mycoscience 43: 21-26.
    • (2002) Mycoscience , vol.43 , pp. 21-26
    • Arakawa, M.1    Nakamura, H.2    Uetake, Y.3    Matsumoto, N.4
  • 7
    • 0035169758 scopus 로고    scopus 로고
    • Scorpion ARMS primers for SNP real-time PCR detection and quantification of Pyrenophora teres
    • Bates J.A., Taylor E.J.A., 2001. Scorpion ARMS primers for SNP real-time PCR detection and quantification of Pyrenophora teres. Molecular Plant Pathology 2: 275-280.
    • (2001) Molecular Plant Pathology , vol.2 , pp. 275-280
    • Bates, J.A.1    Taylor, E.J.A.2
  • 8
    • 0035026519 scopus 로고    scopus 로고
    • The application of real-time PCR to the identification, detection and quantification of Pyrenophora species in barley seed
    • Bates J.A., Taylor E.J.A., Kenyon D.M., Thomas J.E., 2001. The application of real-time PCR to the identification, detection and quantification of Pyrenophora species in barley seed. Molecular Plant Pathology 2: 49-57.
    • (2001) Molecular Plant Pathology , vol.2 , pp. 49-57
    • Bates, J.A.1    Taylor, E.J.A.2    Kenyon, D.M.3    Thomas, J.E.4
  • 10
    • 0034954108 scopus 로고    scopus 로고
    • Soil fungi: Diversity and detection
    • Bridge P., Spooner B., 2001. Soil fungi: diversity and detection. Plant and Soil 232: 147-154.
    • (2001) Plant and Soil , vol.232 , pp. 147-154
    • Bridge, P.1    Spooner, B.2
  • 11
    • 84983029884 scopus 로고    scopus 로고
    • Detection of nematode antagonistic bacteria by fluorogenic molecular probes
    • Ciancio A., Leonetti P., Finetti Sialer M.M., 2000. Detection of nematode antagonistic bacteria by fluorogenic molecular probes. EPPO Bulletin 30: 563-570.
    • (2000) EPPO Bulletin , vol.30 , pp. 563-570
    • Ciancio, A.1    Leonetti, P.2    Finetti Sialer, M.M.3
  • 12
    • 0032145986 scopus 로고    scopus 로고
    • Simple and rapid method for direct extraction of microbial DNA from soil for PCR
    • Cullen D.W., Hirsch P.R., 1998. Simple and rapid method for direct extraction of microbial DNA from soil for PCR. Soil Biology and Biochemistry 30: 983-993.
    • (1998) Soil Biology and Biochemistry , vol.30 , pp. 983-993
    • Cullen, D.W.1    Hirsch, P.R.2
  • 13
    • 0034932974 scopus 로고    scopus 로고
    • Conventional PCR and real-time quantitative PCR detection of Helminthosporium solani in soil and potato tubers
    • Cullen D.W., Lees A.K., Toth I.K., Duncan J.M., 2001. Conventional PCR and real-time quantitative PCR detection of Helminthosporium solani in soil and potato tubers. European Journal of Plant Pathology 107: 387-398.
    • (2001) European Journal of Plant Pathology , vol.107 , pp. 387-398
    • Cullen, D.W.1    Lees, A.K.2    Toth, I.K.3    Duncan, J.M.4
  • 15
    • 0031239471 scopus 로고    scopus 로고
    • Persistence of Pseudomonas aureofaciens strains and DNA in soil
    • England L.S., Lee H., Trevors J.T., 1997. Persistence of Pseudomonas aureofaciens strains and DNA in soil. Soil Biology and Biochemistry 29: 1521-1527.
    • (1997) Soil Biology and Biochemistry , vol.29 , pp. 1521-1527
    • England, L.S.1    Lee, H.2    Trevors, J.T.3
  • 16
    • 0141949615 scopus 로고    scopus 로고
    • Identificazione dei patogeni delle piante in tempo reale
    • Finetti Sialer M., Gallitelli D., 2001. Identificazione dei patogeni delle piante in tempo reale. Informatore Fitopatologico 51(6): 58-62.
    • (2001) Informatore Fitopatologico , vol.51 , Issue.6 , pp. 58-62
    • Finetti Sialer, M.1    Gallitelli, D.2
  • 18
    • 0002067621 scopus 로고
    • Rosellinia necatrix - Fact or fiction
    • Francis S.M., 1985. Rosellinia necatrix - fact or fiction. Sydowia 38: 75-86.
    • (1985) Sydowia , vol.38 , pp. 75-86
    • Francis, S.M.1
  • 19
    • 0038271282 scopus 로고
    • Evaluation of Trichoderma as a biocontrol agent for Rosellinia necatrix
    • Freeman S., Sztejnberg A., Chet I., 1986. Evaluation of Trichoderma as a biocontrol agent for Rosellinia necatrix. Plant and Soil 94: 163-170.
    • (1986) Plant and Soil , vol.94 , pp. 163-170
    • Freeman, S.1    Sztejnberg, A.2    Chet, I.3
  • 20
    • 38249020004 scopus 로고
    • Long-term effect of soil solarization for the control of Rosellinia necatrix in apple
    • Freeman S., Sztejnberg A., Shabi E., Katan J., 1990. Long-term effect of soil solarization for the control of Rosellinia necatrix in apple. Crop Protection 9: 312-316.
    • (1990) Crop Protection , vol.9 , pp. 312-316
    • Freeman, S.1    Sztejnberg, A.2    Shabi, E.3    Katan, J.4
  • 21
    • 0141984180 scopus 로고
    • Le pourridié
    • Guillaumin J.J., 1986. Le pourridié. Phytoma 19 (382): 20-23.
    • (1986) Phytoma , vol.19 , Issue.382 , pp. 20-23
    • Guillaumin, J.J.1
  • 22
    • 0141880655 scopus 로고
    • Rosellinia necatrix Prill
    • Smith I.M., Dunez J., Phillips D.H., Lelliott R.A., Archer S.A. (eds.). Blackwell Scientific Publications, Oxford, UK
    • Guillaumin J.J., 1988. Rosellinia necatrix Prill. In: Smith I.M., Dunez J., Phillips D.H., Lelliott R.A., Archer S.A. (eds.). European Handbook of Plant Diseases, pp. 333-335. Blackwell Scientific Publications, Oxford, UK.
    • (1988) European Handbook of Plant Diseases , pp. 333-335
    • Guillaumin, J.J.1
  • 23
    • 0141984179 scopus 로고
    • Possible use of carbendazim in the control of Dematophora root rot of apple
    • Gupta V.K., 1977. Possible use of carbendazim in the control of Dematophora root rot of apple. Indian Phytopathology 30: 527-531.
    • (1977) Indian Phytopathology , vol.30 , pp. 527-531
    • Gupta, V.K.1
  • 25
    • 0036867254 scopus 로고    scopus 로고
    • Detection of Phytophthora nicotianae and P. citrophthora in citrus roots and soils by nested PCR
    • in the press
    • Ippolito A., Schena L., Nigro F., 2002. Detection of Phytophthora nicotianae and P. citrophthora in citrus roots and soils by nested PCR. European Journal of Plant Pathology (in the press).
    • (2002) European Journal of Plant Pathology
    • Ippolito, A.1    Schena, L.2    Nigro, F.3
  • 26
    • 0027291689 scopus 로고
    • Allelic discrimination by nick-translation PCR with fluorogenic probes
    • Lee L.G., Connell C.R., Bloch W., 1993. Allelic discrimination by nick-translation PCR with fluorogenic probes. Nucleic Acids Research 21: 3761-3766.
    • (1993) Nucleic Acids Research , vol.21 , pp. 3761-3766
    • Lee, L.G.1    Connell, C.R.2    Bloch, W.3
  • 27
    • 0031919330 scopus 로고    scopus 로고
    • Real-time fluorescence detection of a single DNA molecule
    • Lockey C., Otto E., Long Z., 1998. Real-time fluorescence detection of a single DNA molecule. BioTechniques 24: 744-746.
    • (1998) BioTechniques , vol.24 , pp. 744-746
    • Lockey, C.1    Otto, E.2    Long, Z.3
  • 30
    • 0035129246 scopus 로고    scopus 로고
    • Evaluation of gel filtration resins for the removal of PCR-inhibitory substances from soils and sediments
    • Miller D.N., 2001. Evaluation of gel filtration resins for the removal of PCR-inhibitory substances from soils and sediments. Journal of Microbiological Methods 44: 49-58.
    • (2001) Journal of Microbiological Methods , vol.44 , pp. 49-58
    • Miller, D.N.1
  • 31
    • 0141949614 scopus 로고    scopus 로고
    • Diagnosi in tempo reale della verticilliosi dell'olivo mediante Scorpion-PCR
    • Spoleto (Italy)
    • Nigro F., Schena L., Gallone P., 2002. Diagnosi in tempo reale della verticilliosi dell'olivo mediante Scorpion-PCR. In: Atti Convegno Internazionale di Olivicoltura, Spoleto (Italy), 454-461.
    • (2002) Atti Convegno Internazionale di Olivicoltura , pp. 454-461
    • Nigro, F.1    Schena, L.2    Gallone, P.3
  • 32
    • 0000468983 scopus 로고
    • Rosellinia species of the temperate zones
    • Petrini L.E., 1992. Rosellinia species of the temperate zones. Sydowia 44: 169-281.
    • (1992) Sydowia , vol.44 , pp. 169-281
    • Petrini, L.E.1
  • 33
    • 0035046205 scopus 로고    scopus 로고
    • Quantification of HIV-1 by real-time PCR with a unique fluorogenic probe
    • Saha B.K., Tian B., Bucy R.P., 2001. Quantification of HIV-1 by real-time PCR with a unique fluorogenic probe. Journal of Virological Methods 93: 33-42.
    • (2001) Journal of Virological Methods , vol.93 , pp. 33-42
    • Saha, B.K.1    Tian, B.2    Bucy, R.P.3
  • 34
    • 24844468380 scopus 로고    scopus 로고
    • Use of portable real-time PCR for same-day on-site field diagnosis of bacterial diseases
    • Abstract
    • Schaad N.W., Gaush P., Postnikova E., 2002. Use of portable real-time PCR for same-day on-site field diagnosis of bacterial diseases. Phytopathology 92: S110 (Abstract).
    • (2002) Phytopathology , vol.92
    • Schaad, N.W.1    Gaush, P.2    Postnikova, E.3
  • 35
    • 0141984178 scopus 로고    scopus 로고
    • Specific identification of Aureobasidium pullulans strain L47 using Scorpion-PCR
    • Schena L., Finetti Sialer M., Gallitelli D., 2000. Specific identification of Aureobasidium pullulans strain L47 using Scorpion-PCR. EPPO Bulletin 30: 559-562.
    • (2000) EPPO Bulletin , vol.30 , pp. 559-562
    • Schena, L.1    Finetti Sialer, M.2    Gallitelli, D.3
  • 36
    • 0036138515 scopus 로고    scopus 로고
    • Molecular detection of the strain L47 of Aureobasidium pullulans, a biocontrol agent of post-harvest diseases
    • Schena L., Finetti Sialer M., Gallitelli D., 2002a. Molecular detection of the strain L47 of Aureobasidium pullulans, a biocontrol agent of post-harvest diseases. Plant Disease 86: 54-60.
    • (2002) Plant Disease , vol.86 , pp. 54-60
    • Schena, L.1    Finetti Sialer, M.2    Gallitelli, D.3
  • 37
    • 0036285529 scopus 로고    scopus 로고
    • Identification and detection of Rosellinia necatrix by conventional and real-time Scorpion-PCR
    • Schena L., Nigro F., Ippolito A., 2002b. Identification and detection of Rosellinia necatrix by conventional and real-time Scorpion-PCR. European Journal of Plant Pathology 108: 355-366.
    • (2002) European Journal of Plant Pathology , vol.108 , pp. 355-366
    • Schena, L.1    Nigro, F.2    Ippolito, A.3
  • 38
    • 0035713687 scopus 로고    scopus 로고
    • Real-time quantitative PCR
    • Schmittgen T.D., 2001. Real-time quantitative PCR. Methods 25: 383-385.
    • (2001) Methods , vol.25 , pp. 383-385
    • Schmittgen, T.D.1
  • 41
    • 0000592177 scopus 로고
    • Control of Rosellinia necatrix in soil and in apple orchard by solarization and Trichoderma harzianum
    • Sztejnberg A., Freeman S., Chet I., Katan J., 1987. Control of Rosellinia necatrix in soil and in apple orchard by solarization and Trichoderma harzianum. Plant Disease 71: 365-369.
    • (1987) Plant Disease , vol.71 , pp. 365-369
    • Sztejnberg, A.1    Freeman, S.2    Chet, I.3    Katan, J.4
  • 42
    • 0000564516 scopus 로고
    • Host range of Dematophora necatrix, the cause of white root rot disease in fruit trees
    • Sztejnberg A., Madar Z., 1980. Host range of Dematophora necatrix, the cause of white root rot disease in fruit trees. Plant Disease 64: 662-664.
    • (1980) Plant Disease , vol.64 , pp. 662-664
    • Sztejnberg, A.1    Madar, Z.2
  • 44
    • 0029670262 scopus 로고    scopus 로고
    • Molecular beacons: Probes that fluoresce upon hybridization
    • Tyagi S., Kramer F.R., 1996. Molecular beacons: probes that fluoresce upon hybridization. Nature Biotechnology 14: 303-308.
    • (1996) Nature Biotechnology , vol.14 , pp. 303-308
    • Tyagi, S.1    Kramer, F.R.2
  • 45
    • 0033944701 scopus 로고    scopus 로고
    • Detection of Ralstonia solanacearum strains with a quantitative, multiplex, real-time, fluorogenic PCR (TaqMan) assay
    • Weller S.A., Elphinstone J.G., Smith N.C., Boonham N., Stead D.E., 2000. Detection of Ralstonia solanacearum strains with a quantitative, multiplex, real-time, fluorogenic PCR (TaqMan) assay. Applied and Environmental Microbiology 66: 2853-2858.
    • (2000) Applied and Environmental Microbiology , vol.66 , pp. 2853-2858
    • Weller, S.A.1    Elphinstone, J.G.2    Smith, N.C.3    Boonham, N.4    Stead, D.E.5
  • 46
  • 47
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • Innis M.A., Gelfand D.H., Sninsky J.J., White T.J. (eds.). Academic Press Inc., New York, USA
    • White T.J., Bruns T., Lee S., Taylor J., 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis M.A., Gelfand D.H., Sninsky J.J., White T.J. (eds.). PCR Protocols: A Guide to Methods and Applications, pp. 315-322. Academic Press Inc., New York, USA.
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.4


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