메뉴 건너뛰기




Volumn 55, Issue 2, 2003, Pages 447-458

Multiplex PCR screening of soil isolates for novel Bacillus-related lineages

Author keywords

B. benzoevorans; Bacillus; Multiplex PCR; Soil bacteria

Indexed keywords

RIBOSOME DNA; WATER;

EID: 0141643378     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0167-7012(03)00191-X     Document Type: Article
Times cited : (19)

References (23)
  • 1
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann R.I., Ludwig W., Schleifer K.-H. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59:1995;143-169.
    • (1995) Microbiol. Rev. , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.-H.3
  • 2
    • 0025919484 scopus 로고
    • Phylogenetic heterogeneity of the genus Bacillus revealed by comparative analysis of small-subunit-ribosomal RNA sequences
    • Ash C., Farrow J.A.E., Wallbanks S., Collins M.D. Phylogenetic heterogeneity of the genus Bacillus revealed by comparative analysis of small-subunit-ribosomal RNA sequences. Lett. Appl. Microbiol. 13:1991;202-206.
    • (1991) Lett. Appl. Microbiol. , vol.13 , pp. 202-206
    • Ash, C.1    Farrow, J.A.E.2    Wallbanks, S.3    Collins, M.D.4
  • 3
    • 0141491249 scopus 로고    scopus 로고
    • Braunschweig: DSMZ - Deutsche Sammlung von Mikroorganismen und Zellkulturen
    • DSMZ Catalogue of Strains 2001. 7th ed. 2001;DSMZ - Deutsche Sammlung von Mikroorganismen und Zellkulturen, Braunschweig.
    • (2001) DSMZ Catalogue of Strains 2001. 7th Ed.
  • 4
    • 0033135928 scopus 로고    scopus 로고
    • Reviewing the DA001-files: A 16S rRNA chase on suspect #X99967, a Bacillus and Dutch underground activist
    • Felske A. Reviewing the DA001-files: a 16S rRNA chase on suspect #X99967, a Bacillus and Dutch underground activist. J. Microbiol. Methods. 36:1999;77-93.
    • (1999) J. Microbiol. Methods , vol.36 , pp. 77-93
    • Felske, A.1
  • 5
    • 0031909733 scopus 로고    scopus 로고
    • Phylogeny of the main bacterial 16S rRNA sequences in Drentse A grassland soils (The Netherlands)
    • Felske A., Wolterink A., van Lis R., Akkermans A.D.L. Phylogeny of the main bacterial 16S rRNA sequences in Drentse A grassland soils (The Netherlands). Appl. Environ. Microbiol. 64:1998;871-879.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 871-879
    • Felske, A.1    Wolterink, A.2    Van Lis, R.3    Akkermans, A.D.L.4
  • 6
    • 0031732597 scopus 로고    scopus 로고
    • Quantification of 16S rRNAs in complex bacterial communities by multiple competitive reverse transcription-PCR in temperature gradient gel electrophoresis fingerprints
    • Felske A., Akkermans A.D.L., de Vos W.M. Quantification of 16S rRNAs in complex bacterial communities by multiple competitive reverse transcription-PCR in temperature gradient gel electrophoresis fingerprints. Appl. Environ. Microbiol. 64:1998;4581-4587.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 4581-4587
    • Felske, A.1    Akkermans, A.D.L.2    De Vos, W.M.3
  • 7
    • 0031733578 scopus 로고    scopus 로고
    • In situ detection of an uncultured predominant Bacillus in Dutch grassland soils
    • Felske A., Akkermans A.D.L., de Vos W.M. In situ detection of an uncultured predominant Bacillus in Dutch grassland soils. Appl. Environ. Microbiol. 64:1998;4588-4590.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 4588-4590
    • Felske, A.1    Akkermans, A.D.L.2    De Vos, W.M.3
  • 9
    • 0028610633 scopus 로고
    • Construction of eco-collection of paddy field soil bacteria for population analysis
    • Gorlach K., Shingaki R., Morisaki H., Hattori T. Construction of eco-collection of paddy field soil bacteria for population analysis. J. Gen. Appl. Microbiol. 40:1994;509-517.
    • (1994) J. Gen. Appl. Microbiol. , vol.40 , pp. 509-517
    • Gorlach, K.1    Shingaki, R.2    Morisaki, H.3    Hattori, T.4
  • 10
    • 0842345375 scopus 로고    scopus 로고
    • Bacillus novalis sp. nov., Bacillus vireti sp. nov., Bacillus soli sp. nov., Bacillus bataviensis sp. nov. and Bacillus drentensis sp. nov., five new species isolated from the Drentse A grasslands
    • (in press)
    • Heyrman J., Vanparys B., Logan N.A., Balcaen A., Rodriguez-Diaz M., Felske A., De Vos P. Bacillus novalis sp. nov., Bacillus vireti sp. nov., Bacillus soli sp. nov., Bacillus bataviensis sp. nov. and Bacillus drentensis sp. nov., five new species isolated from the Drentse A grasslands. Int. J. Syst. Evol. Microbiol. 2003;. (in press).
    • (2003) Int. J. Syst. Evol. Microbiol.
    • Heyrman, J.1    Vanparys, B.2    Logan, N.A.3    Balcaen, A.4    Rodriguez-Diaz, M.5    Felske, A.6    De Vos, P.7
  • 11
    • 0036250036 scopus 로고    scopus 로고
    • Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia
    • Janssen P.H., Yates P.S., Grinton B.E., Taylor P.M., Sait M. Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia. Appl. Environ. Microbiol. 68:2002;2391-2396.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 2391-2396
    • Janssen, P.H.1    Yates, P.S.2    Grinton, B.E.3    Taylor, P.M.4    Sait, M.5
  • 12
    • 0033081270 scopus 로고    scopus 로고
    • Inclusion of polyvinylpyrrolidone in the polymerase chain reaction reverses the inhibitory effects of polyphenolic contamination of RNA
    • Koonjul P.K., Brandt W.F., Farrant J.M., Lindsey G.G. Inclusion of polyvinylpyrrolidone in the polymerase chain reaction reverses the inhibitory effects of polyphenolic contamination of RNA. Nucleic Acids Res. 27:1999;915-916.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 915-916
    • Koonjul, P.K.1    Brandt, W.F.2    Farrant, J.M.3    Lindsey, G.G.4
  • 14
    • 0030827072 scopus 로고    scopus 로고
    • Incubation time and media requirements of culturable bacteria from different phylogenetic groups
    • Mitsui H., Gorlach K., Lee H., Hattori R., Hattori T. Incubation time and media requirements of culturable bacteria from different phylogenetic groups. J. Microbiol. Methods. 30:1997;103-110.
    • (1997) J. Microbiol. Methods , vol.30 , pp. 103-110
    • Mitsui, H.1    Gorlach, K.2    Lee, H.3    Hattori, R.4    Hattori, T.5
  • 15
    • 0017658207 scopus 로고
    • Isolation and properties of a denitrifying bacterium related to Pseudomonas lemoignei
    • Pichinoty F., Mandel M., Greenway B., Garcia J.-L. Isolation and properties of a denitrifying bacterium related to Pseudomonas lemoignei. Int. J. Syst. Bacteriol. 27:1977;346-348.
    • (1977) Int. J. Syst. Bacteriol. , vol.27 , pp. 346-348
    • Pichinoty, F.1    Mandel, M.2    Greenway, B.3    Garcia, J.-L.4
  • 16
    • 0002422043 scopus 로고
    • Principal-components and factor analysis for the description of microbial populations
    • Rosswall T., Kvillner E. Principal-components and factor analysis for the description of microbial populations. Adv. Microb. Ecol. 2:1978;1-48.
    • (1978) Adv. Microb. Ecol. , vol.2 , pp. 1-48
    • Rosswall, T.1    Kvillner, E.2
  • 17
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for constructing phylogenetic trees
    • Saitou N., Nei M. The neighbor-joining method: a new method for constructing phylogenetic trees. Mol. Biol. Evol. 4:1987;406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 18
    • 0021779934 scopus 로고
    • Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats
    • Staley J.T., Konopka A. Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats. Annu. Rev. Microbiol. 39:1985;321-346.
    • (1985) Annu. Rev. Microbiol. , vol.39 , pp. 321-346
    • Staley, J.T.1    Konopka, A.2
  • 20
    • 0003449416 scopus 로고
    • (Internet). Department of Microbiology, Technical University of Munich, München, Germany
    • Strunk, O., Ludwig, W., 1995. ARB - a software environment for sequence data. In: http://www.arb-home.de/ARB/ (Internet). Department of Microbiology, Technical University of Munich, München, Germany.
    • (1995) ARB - A software environment for sequence data
    • Strunk, O.1    Ludwig, W.2
  • 22
    • 0035057859 scopus 로고    scopus 로고
    • The microbial diversity in picoplankton enrichment cultures: A molecular screening of marine isolates
    • Uphoff H.U., Felske A., Fehr W., Wagner-Döbler I. The microbial diversity in picoplankton enrichment cultures: a molecular screening of marine isolates. FEMS Microbiol Ecol. 35:2001;249-258.
    • (2001) FEMS Microbiol Ecol. , vol.35 , pp. 249-258
    • Uphoff, H.U.1    Felske, A.2    Fehr, W.3    Wagner-Döbler, I.4
  • 23
    • 0026865061 scopus 로고
    • Detection and identification of multiple mycobacterial pathogens by DNA amplification in a single tube
    • Wilton S., Cousins D. Detection and identification of multiple mycobacterial pathogens by DNA amplification in a single tube. PCR Methods Appl. 1:1992;269-273.
    • (1992) PCR Methods Appl. , vol.1 , pp. 269-273
    • Wilton, S.1    Cousins, D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.