European consortia building integrated resources for Arabidopsis functional genomics

Current Opinion in Plant Biology

Volumn 6, Issue 5, 2003, Pages 426-429

  Hilson, Pierre ^a   Small, Ian ^b   Kuiper, Martin T R ^a  

^a DEPARTMENT OF PLANT SYSTEMS BIOLOGY   (Belgium)

^b INSTITUTE OF PLANT SCIENCES PARIS SACLAY IPS2   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; EMBRYOPHYTA;

EID: 0141502037     PISSN: 13695266     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1369-5266(03)00086-4     Document Type: Note

References (16)

1. The Multinational Arabidopsis Steering Committee (MASC): The Multinational Coordinated Arabidopsis thaliana functional genomics project - beyond the whole genome sequence. URL: http://www.nsf.gov/pubsys/ods/getpub.cfm?bio0202
2. Thareau V, Déhais P, Serizet C, Hilson P, Rouzé P, Aubourg S: Automatic design of gene-specific sequence tags for genome-wide functional studies. Bioinformatics 2003, in press.
3. Crowe ML, Serizet C, Thareau V, Aubourg S, Rouzé P, Beynon JL, Hilson P, Weisbeek P, Van Hummelen P, Reymond P et al.: CATMA - a complete Arabidopsis GST database. Nucleic Acids Res 2003, 31:156-158.
4. Boyes DC, Zayed AM, Ascenzi R, McCaskill AJ, Huffman NE, Davis KR, Gorlach J: Growth-stage-based phenotypic analysis of Arabidopsis: a model for high-throughput functional genomics in plants. Plant Cell 2001, 13:1499-1510.
5. Dudley AM, Aach J, Steffen MA, Church GM: Measuring absolute expression with microarrays with a calibrated reference sample and an extended signal intensity range. Proc Natl Acad Sci USA 2002, 99:7554-7559.
6. Sterrenburg E, Turk R, Boer JM, van Ommen GB, den Dunnen JT: A common reference for cDNA microarray hybridizations. Nucleic Acids Res 2002, 30:116-118.
7. Szabados L, Kovacs I, Oberschall A, Abraham E, Kerekes I, Zsigmond L, Nagy R, Alvarado M, Krasovskaja I, Gal M et al.: Distribution of 1000 sequenced T-DNA tags in the Arabidopsis genome. Plant J 2002, 32:233-242.
8. Sessions A, Burke E, Presting G, Aux G, McElver J, Patton D, Dietrich B, Ho P, Bacwaden J, Ko C et al.: A high-throughput Arabidopsis reverse-genetics system. Plant Cell 2002, 14:2985-2994.
9. Krysan PJ, Young JC, Jester PJ, Monson S, Copenhaver G, Preuss D, Sussman MR: Characterization of T-DNA insertion sites in Arabidopsis thaliana and the implications for saturation mutagenesis. OMICS 2002, 6:163-174.
10. Galbiati M, Moreno MA, Nadzan G, Zourelidou M, Dellaporta SL: Large-scale T-DNA mutagenesis in Arabidopsis for functional genomic analysis. Funct Integr Genomics 2000, 1:25-34.
11. Bhatt AM, Page T, Lawson EJ, Lister C, Dean C: Use of Ac as an insertional mutagen in Arabidopsis. Plant J 1996, 9:935-945.
12. Marsch-Martinez N, Greco R, Van Arkel G, Herrera-Estrella L, Pereira A: Activation tagging using the En-I maize transposon system in Arabidopsis. Plant Physiol 2002, 129:1544-1556.
13. Waterhouse PM, Helliwell CA: Exploring plant genomes by RNA-induced gene silencing. Nat Rev Genet 2003, 4:29-38.
14. Karimi M, Inzé D, Depicker A: GATEWAY™ vectors for Agrobacterium-mediated plant transformation. Trends Plant Sci 2002, 7:193-195.
15. Reboul J, Vaglio P, Rual J-F, Lamesch P, Martinez M, Armstrong CM, Li S, Jacotot L, Bertin N, Janky R et al.: C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Nat Genet 2003, 34:35-41.
16. Paz-Ares J and the REGIA Consortium: REGIA, an EU project on functional genomics of transcription factors from Arabidopsis thaliana, Comp Funct Genom 2002, 3:102-108.