-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul,S.F., Madden,T.L., Schaffer,A.A., Zhang,J., Zhang,Z., Miller,W. and Lipman,D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res., 25, 3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0034649566
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
Arabidopsis Genome Initiative
-
Arabidopsis Genome Initiative (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature, 408, 796-815.
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
-
4
-
-
0001550068
-
Predicting DNA duplex stability from the base sequence
-
Breslauer,K.J., Frank,R., Blocker,H. and Markey,L.A. (1986) Predicting DNA duplex stability from the base sequence. Proc. Natl Acad. Sci. USA, 83, 3746-3750.
-
(1986)
Proc. Natl Acad. Sci. USA
, vol.83
, pp. 3746-3750
-
-
Breslauer, K.J.1
Frank, R.2
Blocker, H.3
Markey, L.A.4
-
5
-
-
0037252603
-
CATMA - A complete Arabidopsis GST database
-
Crowe,M.L., Serizet,C., Thareau,V., Aubourg,S., Rouzé,P, Hilson,P., Beynon,J., Weisbeek,P., van Hummelen,P., Reymond,P. et al. (2003) CATMA - A complete Arabidopsis GST database. Nucleic Acids Res., 31, 156-158.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 156-158
-
-
Crowe, M.L.1
Serizet, C.2
Thareau, V.3
Aubourg, S.4
Rouzé, P.5
Hilson, P.6
Beynon, J.7
Weisbeek, P.8
van Hummelen, P.9
Reymond, P.10
-
6
-
-
0034517120
-
Microarray analysis of developing Arabidopsis seeds
-
Girke,T., Todd,J., Ruuska,S., WhiteJ., Berming,C. and Ohlrogge,J. (2000) Microarray analysis of developing Arabidopsis seeds. Plant Physiol., 124, 1570-1581.
-
(2000)
Plant Physiol.
, vol.124
, pp. 1570-1581
-
-
Girke, T.1
Todd, J.2
Ruuska, S.3
White, J.4
Berming, C.5
Ohlrogge, J.6
-
7
-
-
0035863927
-
Assessment of clone identity and sequence fidelity for 1189 IMAGE cDNA clones
-
Halgren,R.G., Fielden,M.R., Fong,C.J. and Zacharewski,T.R. (2001) Assessment of clone identity and sequence fidelity for 1189 IMAGE cDNA clones. Nucleic Acids Res., 29,582-588.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 582-588
-
-
Halgren, R.G.1
Fielden, M.R.2
Fong, C.J.3
Zacharewski, T.R.4
-
8
-
-
0035072249
-
Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer
-
Hughes,T.R., Mao,M., Jones,A.R., Burchard,J., Marton,M.J., Shannon,K.W., Lefkowitz,S.M., Ziman,M., Schelter,J.M., Meyer,M.R. et al. (2001) Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer. Nat. Biotechnol., 19, 342-347.
-
(2001)
Nat. Biotechnol.
, vol.19
, pp. 342-347
-
-
Hughes, T.R.1
Mao, M.2
Jones, A.R.3
Burchard, J.4
Marton, M.J.5
Shannon, K.W.6
Lefkowitz, S.M.7
Ziman, M.8
Schelter, J.M.9
Meyer, M.R.10
-
9
-
-
0347033273
-
Gene-sequence-tag expression analyses of 1800 genes related to chloroplast functions
-
Kurth,J., Varotto,C., Pesaresi,P., Biehl,A., Richly,E., Salamini,F. and Leister,D. (2002) Gene-sequence-tag expression analyses of 1800 genes related to chloroplast functions. Planta, 215, 101-109.
-
(2002)
Planta
, vol.215
, pp. 101-109
-
-
Kurth, J.1
Varotto, C.2
Pesaresi, P.3
Biehl, A.4
Richly, E.5
Salamini, F.6
Leister, D.7
-
10
-
-
0035190608
-
Selection of optimal DNA oligos for gene expression arrays
-
Li,F. and Stormo,G.D. (2001) Selection of optimal DNA oligos for gene expression arrays. Bioinformatics, 17, 1067-1076.
-
(2001)
Bioinformatics
, vol.17
, pp. 1067-1076
-
-
Li, F.1
Stormo, G.D.2
-
11
-
-
0033052010
-
Genetic redundancy and gene fusion in the genome of the baker's yeast Saccharomyces cerevisiae: Functional characterization of a three-member gene family involved in the thiamine biosynthetic pathway
-
Llorente,B., Fairhead,C. and Dujon,B. (1999) Genetic redundancy and gene fusion in the genome of the baker's yeast Saccharomyces cerevisiae: functional characterization of a three-member gene family involved in the thiamine biosynthetic pathway. Mol. Microbiol., 32, 1140-1152.
-
(1999)
Mol. Microbiol.
, vol.32
, pp. 1140-1152
-
-
Llorente, B.1
Fairhead, C.2
Dujon, B.3
-
12
-
-
10544256600
-
Expression monitoring by hybridization to high-density oligonucleotide arrays
-
Lockhart,D.J., Dong,H., Byrne,M.C., Follettie,M.T., Gallo,M.V., Chee M.S., Mittmann,M., Wang,C., Kobayashi,M., Horton,H. and Brown,E.L. (1996) Expression monitoring by hybridization to high-density oligonucleotide arrays. Nat. Biotechnol., 14, 1675-1680.
-
(1996)
Nat. Biotechnol.
, vol.14
, pp. 1675-1680
-
-
Lockhart, D.J.1
Dong, H.2
Byrne, M.C.3
Follettie, M.T.4
Gallo, M.V.5
Chee, M.S.6
Mittmann, M.7
Wang, C.8
Kobayashi, M.9
Horton, H.10
Brown, E.L.11
-
13
-
-
0036796369
-
Current methods of gene prediction, their strengths and weaknesses
-
Mathé, C., Sagot,M.F., Schiex,T. and Rouzé, P. (2002) Current methods of gene prediction, their strengths and weaknesses. Nucleic Acids Res., 30, 4103-4117.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 4103-4117
-
-
Mathé, C.1
Sagot, M.F.2
Schiex, T.3
Rouzé, P.4
-
14
-
-
0036186456
-
Cross-hybridization of closely related genes on high-density macroarrays
-
Miller,N.A., Gong,Q., Bryan,R., Ruvolo,M., Turner,L.A. and LaBrie,S.T. (2002) Cross-hybridization of closely related genes on high-density macroarrays. Biotechniques, 32, 620-625.
-
(2002)
Biotechniques
, vol.32
, pp. 620-625
-
-
Miller, N.A.1
Gong, Q.2
Bryan, R.3
Ruvolo, M.4
Turner, L.A.5
LaBrie, S.T.6
-
15
-
-
0028051148
-
Oligonucleotide probe design - A new approach
-
Mitsuhashi,M., Cooper,A., Ogura,M., Shinagawa,T., Yano,K. and Hosokawa,T. (1994) Oligonucleotide probe design - a new approach. Nature, 24, 759-761.
-
(1994)
Nature
, vol.24
, pp. 759-761
-
-
Mitsuhashi, M.1
Cooper, A.2
Ogura, M.3
Shinagawa, T.4
Yano, K.5
Hosokawa, T.6
-
16
-
-
0036188265
-
Avoiding cross hybridization by choosing nonredundant targets on cDNA arrays
-
Nielsen,H.B. and Knudsen,S. (2002) Avoiding cross hybridization by choosing nonredundant targets on cDNA arrays. Bioinformatics, 18, 321-322.
-
(2002)
Bioinformatics
, vol.18
, pp. 321-322
-
-
Nielsen, H.B.1
Knudsen, S.2
-
17
-
-
0034908280
-
MEDUSA: Large scale automatic selection and visual assessment of PCR primer pairs
-
Podowski,R.M. and Sonnhammer,E.L. (2001) MEDUSA: large scale automatic selection and visual assessment of PCR primer pairs. Bioinformatics, 17, 656-657.
-
(2001)
Bioinformatics
, vol.17
, pp. 656-657
-
-
Podowski, R.M.1
Sonnhammer, E.L.2
-
18
-
-
0033990048
-
Primer3 on the WWW for general users and for biologist programmers
-
Rozen,S. and Skaletsky,H. (2000) Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol., 132, 365-386.
-
(2000)
Methods Mol. Biol.
, vol.132
, pp. 365-386
-
-
Rozen, S.1
Skaletsky, H.2
-
19
-
-
0035504407
-
GST-PRIME: A genome-wide primer design software for the generation of gene sequence tags
-
Varotto,C., Richly,E., Salamini,F. and Leister,D. (2001) GST-PRIME: a genome-wide primer design software for the generation of gene sequence tags. Nucleic Acids Res., 29, 4373-4377.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 4373-4377
-
-
Varotto, C.1
Richly, E.2
Salamini, F.3
Leister, D.4
-
20
-
-
0032953158
-
Gene duplication and gene conversion in the Caenorhabditis elegans genome
-
Semple,C. and Wolfe,K.H. (1999) Gene duplication and gene conversion in the Caenorhabditis elegans genome. J. Mol. Evol., 48, 555-564.
-
(1999)
J. Mol. Evol.
, vol.48
, pp. 555-564
-
-
Semple, C.1
Wolfe, K.H.2
-
21
-
-
0030947344
-
Molecular evidence for an ancient duplication of the entire yeast genome
-
Wolfe,K.H. and Shields,D.C. (1997) Molecular evidence for an ancient duplication of the entire yeast genome. Nature, 387, 708-713.
-
(1997)
Nature
, vol.387
, pp. 708-713
-
-
Wolfe, K.H.1
Shields, D.C.2
-
22
-
-
1842844023
-
PRIMERGENS: Robust and efficient design of gene-specific probes for microarray analysis
-
Xu,D., Li,G., Wu,L., Zhou,J. and Xu,Y. (2002) PRIMERGENS: robust and efficient design of gene-specific probes for microarray analysis. Bioinformatics, 18, 1432-1437.
-
(2002)
Bioinformatics
, vol.18
, pp. 1432-1437
-
-
Xu, D.1
Li, G.2
Wu, L.3
Zhou, J.4
Xu, Y.5
-
23
-
-
0002287019
-
Algorithms and thermodynamics for RNA secondary structure prediction
-
Barciszewski,J., Clark,B.F.C. and Clark (eds), Kluwer Academic NATO ASI Series edition, Dordrecht
-
Zucker,M., Mathews,D.H. and Turner,D.H. (1999) Algorithms and thermodynamics for RNA secondary structure prediction. In Barciszewski,J., Clark,B.F.C. and Clark (eds), A Practical Guide in RNA Biochemistry and Biotechnology. Kluwer Academic NATO ASI Series edition, Dordrecht.
-
(1999)
A Practical Guide in RNA Biochemistry and Biotechnology
-
-
Zucker, M.1
Mathews, D.H.2
Turner, D.H.3
|