-
2
-
-
0032569982
-
PCNA, a multifunctional ring on DNA
-
Tsurimoto T. 1998. PCNA, a multifunctional ring on DNA. Biochem. Biophys. Acta. 1443, 23-39.
-
(1998)
Biochem. Biophys. Acta
, vol.1443
, pp. 23-39
-
-
Tsurimoto, T.1
-
3
-
-
0035807967
-
Okazaki fragment processing: Modulation of the strand displacement activity of DNA polymerase delta by the concerted action of replication protein A, proliferating cell nuclear antigen, and flap endonuclease-1
-
Maga G., Villani G., Tillement V., Stucki M., Locatelli G.A., Frouin L, Spadari S., Hubscher U. 2001. Okazaki fragment processing: modulation of the strand displacement activity of DNA polymerase delta by the concerted action of replication protein A, proliferating cell nuclear antigen, and flap endonuclease-1. Proc. Natl. Acad. Sci. USA. 98, 14298-14303.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 14298-14303
-
-
Maga, G.1
Villani, G.2
Tillement, V.3
Stucki, M.4
Locatelli, G.A.5
Frouin, L.6
Spadari, S.7
Hubscher, U.8
-
4
-
-
0033230401
-
Multiple competition reactions for RPA order the assembly of the DNA polymerase delta holoenzyme
-
Yuzhakov A., Kelman Z., Hurwitz J., O'Donnell M. 1999. Multiple competition reactions for RPA order the assembly of the DNA polymerase delta holoenzyme. EMBO J. 18, 6189-6199.
-
(1999)
EMBO J.
, vol.18
, pp. 6189-6199
-
-
Yuzhakov, A.1
Kelman, Z.2
Hurwitz, J.3
O'Donnell, M.4
-
5
-
-
0040247676
-
Eukaryotic DNA polymerases, a growing family
-
Hubscher U., Nasheuer H.P., Syvaoja J.E. 2000. Eukaryotic DNA polymerases, a growing family. Trends Biochem. Sci. 25, 143-147.
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 143-147
-
-
Hubscher, U.1
Nasheuer, H.P.2
Syvaoja, J.E.3
-
6
-
-
0033902372
-
Synthesis of base-substituted dUTP analogues carrying a photoreactive group and their application to study human replication protein A
-
Kolpashchikov D.M., Ivanova T.M., Bogachev V.S., Nasheuer H.P., Weisshart K., Favre A., Pestryakov P.E., Lavrik O.I. 2000. Synthesis of base-substituted dUTP analogues carrying a photoreactive group and their application to study human replication protein A. Bioconjug. Chem. 11, 445-451.
-
(2000)
Bioconjug. Chem.
, vol.11
, pp. 445-451
-
-
Kolpashchikov, D.M.1
Ivanova, T.M.2
Bogachev, V.S.3
Nasheuer, H.P.4
Weisshart, K.5
Favre, A.6
Pestryakov, P.E.7
Lavrik, O.I.8
-
7
-
-
0029337717
-
Synthesis and characterization of (d)NTP derivatives substituted with residues of different photoreagents
-
Wlassoff W.A, Dobrikov M.I., Safronov I.V., Dudko R.Y., Bogachev V.S., Kandaurova V.V., Shishkin G.V., Dymshits G.M., Lavrik O.I. 1995. Synthesis and characterization of (d)NTP derivatives substituted with residues of different photoreagents. Bioconjug. Chem. 6, 352-360.
-
(1995)
Bioconjug. Chem.
, vol.6
, pp. 352-360
-
-
Wlassoff, W.A.1
Dobrikov, M.I.2
Safronov, I.V.3
Dudko, R.Y.4
Bogachev, V.S.5
Kandaurova, V.V.6
Shishkin, G.V.7
Dymshits, G.M.8
Lavrik, O.I.9
-
8
-
-
0346543460
-
New photoreactive N(4)-substituted dCTP analogs: Synthesis, photochemical characteristics, and substrate properties in HIV-1 reverse transcriptase-catalyzed DNA synthesis
-
Safronov I.V., Shcherbik N.V, Khodyreva S.N., Vlasov V.A., Dobrikov M.I., Shishkin G.V., Lavrik O.I. 1997. New photoreactive N(4)-substituted dCTP analogs: Synthesis, photochemical characteristics, and substrate properties in HIV-1 reverse transcriptase-catalyzed DNA synthesis. Bioorgan. Khim. 23, 576-585.
-
(1997)
Bioorgan. Khim.
, vol.23
, pp. 576-585
-
-
Safronov, I.V.1
Shcherbik, N.V.2
Khodyreva, S.N.3
Vlasov, V.A.4
Dobrikov, M.I.5
Shishkin, G.V.6
Lavrik, O.I.7
-
9
-
-
0033071837
-
New reagents for photoaffinity modification of biopolymers: Photoaffinity modification of Tte DNA polymerase
-
Kolpashchikov D.M., Zakharenko A.L., Dezhurov S.V., Rechkunova N.I., Khodyreva S.N., Degtyarev S.Kh., Litvak V.V., Lavrik O.I. 1999. New reagents for photoaffinity modification of biopolymers: Photoaffinity modification of Tte DNA polymerase. Bioorgan. Khim. 25, 129-136.
-
(1999)
Bioorgan. Khim.
, vol.25
, pp. 129-136
-
-
Kolpashchikov, D.M.1
Zakharenko, A.L.2
Dezhurov, S.V.3
Rechkunova, N.I.4
Khodyreva, S.N.5
Degtyarev, S.Kh.6
Litvak, V.V.7
Lavrik, O.I.8
-
10
-
-
0040748777
-
Reagents for modification of protein-nucleic acid complexes: II. Site-specific photomodification of DNA polymerase complexes with β-primers elongated with exo-N-substituted arylazido derivatives of dCTP
-
Drachkova I.A., Petruseva I.O., Safronov I.V., Zakharenko A.L., Shishkin G.V., Lavrik O.I., Khodyreva S.N. 2001. Reagents for modification of protein-nucleic acid complexes: II. Site-specific photomodification of DNA polymerase complexes with β-primers elongated with exo-N-substituted arylazido derivatives of dCTP. Bioorgan. Khim. 27, 197-204.
-
(2001)
Bioorgan. Khim.
, vol.27
, pp. 197-204
-
-
Drachkova, I.A.1
Petruseva, I.O.2
Safronov, I.V.3
Zakharenko, A.L.4
Shishkin, G.V.5
Lavrik, O.I.6
Khodyreva, S.N.7
-
11
-
-
0029807291
-
dNTP binding to HIV-1 reverse transcriptase and mammalian DNA polymerase beta as revealed by affinity labeling with a photoreactive dNTP analog
-
Lavrik O.I., Prasad R., Beard W.A., Safronov I.V., Dobrikov M.I., Srivastava D.K., Shishkin G.V., Wood T.G., Wilson S.H. 1996. dNTP binding to HIV-1 reverse transcriptase and mammalian DNA polymerase beta as revealed by affinity labeling with a photoreactive dNTP analog. J. Biol. Chem. 271, 21891-21897.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 21891-21897
-
-
Lavrik, O.I.1
Prasad, R.2
Beard, W.A.3
Safronov, I.V.4
Dobrikov, M.I.5
Srivastava, D.K.6
Shishkin, G.V.7
Wood, T.G.8
Wilson, S.H.9
-
12
-
-
0035551488
-
Investigation of the dNTP-binding site of HIV-1 reverse transcriptase using photoreactive analogs of dNTP
-
Zakharenko A.L., Kolpashchikov D.M., Khodyreva S.N., Lavrik O.I., Menendez-Arias L. 2001. Investigation of the dNTP-binding site of HIV-1 reverse transcriptase using photoreactive analogs of dNTP. Biokhimiya. 66, 1227-1237.
-
(2001)
Biokhimiya
, vol.66
, pp. 1227-1237
-
-
Zakharenko, A.L.1
Kolpashchikov, D.M.2
Khodyreva, S.N.3
Lavrik, O.I.4
Menendez-Arias, L.5
-
13
-
-
0028139126
-
Affinity modification of human immunodeficiency virus reverse transcriptase and DNA template by photoreactive dCTP analogs
-
Doronin S.V., Dobrikov M.I., Buckle M., Roux P., Buc H., Lavrik O.I. 1994. Affinity modification of human immunodeficiency virus reverse transcriptase and DNA template by photoreactive dCTP analogs. FEBS Lett. 354, 200-202.
-
(1994)
FEBS Lett.
, vol.354
, pp. 200-202
-
-
Doronin, S.V.1
Dobrikov, M.I.2
Buckle, M.3
Roux, P.4
Buc, H.5
Lavrik, O.I.6
-
14
-
-
1642510423
-
Affinity modification of Thermus thermophilus DNA polymerase and template DNA with photoreactive dCTP derivatives
-
Zakharenko A.L., Khodyreva S.N., Rechkunova N.I., Safronov I.V., Pyshnyi D.V., Degtyarev S.Kh., Lavrik O.I. 1998. Affinity modification of Thermus thermophilus DNA polymerase and template DNA with photoreactive dCTP derivatives. Biokhimiya. 63, 1090-1096.
-
(1998)
Biokhimiya
, vol.63
, pp. 1090-1096
-
-
Zakharenko, A.L.1
Khodyreva, S.N.2
Rechkunova, N.I.3
Safronov, I.V.4
Pyshnyi, D.V.5
Degtyarev, S.Kh.6
Lavrik, O.I.7
-
15
-
-
0026496872
-
Photoaffinity labeling of DNA polymerase alpha DNA primase complex based on the catalytic competence of a dNTP reactive analog
-
Doronin S.V., Dobrikov M.I., Lavrik O.I. 1992. Photoaffinity labeling of DNA polymerase alpha DNA primase complex based on the catalytic competence of a dNTP reactive analog. FEBS Lett. 313, 31-33.
-
(1992)
FEBS Lett.
, vol.313
, pp. 31-33
-
-
Doronin, S.V.1
Dobrikov, M.I.2
Lavrik, O.I.3
-
16
-
-
0031767534
-
Molecular constituents of the replication apparatus in the plasmodium of Physarum polycephalum: Identification by photoaffinity labelling
-
Doerhoefer S., Khodyreva S., Safronov I.V., Wlassoff W.A., Anarbaev R., Lavrik O.I., Holler E. 1998. Molecular constituents of the replication apparatus in the plasmodium of Physarum polycephalum: identification by photoaffinity labelling. Microbiology. 144, 3181-3193.
-
(1998)
Microbiology
, vol.144
, pp. 3181-3193
-
-
Doerhoefer, S.1
Khodyreva, S.2
Safronov, I.V.3
Wlassoff, W.A.4
Anarbaev, R.5
Lavrik, O.I.6
Holler, E.7
-
17
-
-
0037007223
-
Structure of the RPA trimerization core and its role in the multistep DNA-binding mechanism of RPA
-
Bochkareva E., Korolev S., Lees-Miller S.P., Bochkarev A. 2002. Structure of the RPA trimerization core and its role in the multistep DNA-binding mechanism of RPA. EMBO J. 21, 1855-1863.
-
(2002)
EMBO J.
, vol.21
, pp. 1855-1863
-
-
Bochkareva, E.1
Korolev, S.2
Lees-Miller, S.P.3
Bochkarev, A.4
-
18
-
-
0030908093
-
Replication protein A: A heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism
-
Wold M.S. 1997. Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism. Annu. Rev. Biochem. 66, 61-92.
-
(1997)
Annu. Rev. Biochem.
, vol.66
, pp. 61-92
-
-
Wold, M.S.1
-
20
-
-
0032518157
-
Subunits of human replication protein A are crosslinked by photoreactive primers synthesized by DNA polymerases
-
Lavrik O.I., Nasheuer H.-P., Weisshart K., Wold M.S., Prasad R., Beard W.A., Wilson S.H., Favre A. 1998. Subunits of human replication protein A are crosslinked by photoreactive primers synthesized by DNA polymerases. Nucleic Acids Res. 26, 602-607.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 602-607
-
-
Lavrik, O.I.1
Nasheuer, H.-P.2
Weisshart, K.3
Wold, M.S.4
Prasad, R.5
Beard, W.A.6
Wilson, S.H.7
Favre, A.8
-
21
-
-
0033230182
-
RPA subunit arrangement near the 3′-end of the primer is modulated by the length of the template strand and cooperative protein interactions
-
Lavrik O.I., Kolpashchikov D.M., Weisshart K., Nasheuer H.-P., Khodyreva S.N., Favre A. 1999. RPA subunit arrangement near the 3′-end of the primer is modulated by the length of the template strand and cooperative protein interactions. Nucleic Acids Res. 27, 4235-4240.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 4235-4240
-
-
Lavrik, O.I.1
Kolpashchikov, D.M.2
Weisshart, K.3
Nasheuer, H.-P.4
Khodyreva, S.N.5
Favre, A.6
-
22
-
-
0032414605
-
Alternative conformations of human replication protein A are detected by crosslinks with primers carrying a photoreactive group at the 3′-end
-
Lavrik O.I., Kolpashchikov D.M., Nasheuer H.-P., Weisshart K., Favre A. 1998. Alternative conformations of human replication protein A are detected by crosslinks with primers carrying a photoreactive group at the 3′-end. FEBS Lett. 441, 186-190.
-
(1998)
FEBS Lett.
, vol.441
, pp. 186-190
-
-
Lavrik, O.I.1
Kolpashchikov, D.M.2
Nasheuer, H.-P.3
Weisshart, K.4
Favre, A.5
-
23
-
-
0035863934
-
Polarity of human replication protein A binding to DNA
-
Kolpashchikov D.M., Khodyreva S.N., Khlimankov D.Y., Wold M.S., Favre A., Lavrik O.I. 2001. Polarity of human replication protein A binding to DNA. Nucleic Acids Res. 29, 373-379.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 373-379
-
-
Kolpashchikov, D.M.1
Khodyreva, S.N.2
Khlimankov, D.Y.3
Wold, M.S.4
Favre, A.5
Lavrik, O.I.6
-
24
-
-
0031741549
-
The middle subunit of replication protein A contacts growing RNA-DNA primers in replicating simian virus 40 chromosomes
-
Mass G., Nethanel T., Kaufmann G. 1998. The middle subunit of replication protein A contacts growing RNA-DNA primers in replicating simian virus 40 chromosomes. Mol. Cell. Biol. 18, 6399-6407.
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 6399-6407
-
-
Mass, G.1
Nethanel, T.2
Kaufmann, G.3
-
25
-
-
0035883745
-
Replication protein A modulates its interface with the primed DNA template during RNA-DNA primer elongation in replicating SV40 chromosomes
-
Mass G., Nethanel T., Lavrik O.I., Wold M.S., Kaufmann G. 2001. Replication protein A modulates its interface with the primed DNA template during RNA-DNA primer elongation in replicating SV40 chromosomes. Nucleic Acids Res. 29, 3892-3899.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 3892-3899
-
-
Mass, G.1
Nethanel, T.2
Lavrik, O.I.3
Wold, M.S.4
Kaufmann, G.5
-
26
-
-
0032967717
-
Interaction of the p70 subunit of RPA with a DNA template directs p32 to the 3′-end of nascent DNA
-
Kolpashchikov D.M., Weisshart K., Nasheuer H.-P., Khodyreva S.N., Fanning E., Favre A., Lavrik O.I. 1999. Interaction of the p70 subunit of RPA with a DNA template directs p32 to the 3′-end of nascent DNA. FEBS Lett. 450, 131-134.
-
(1999)
FEBS Lett.
, vol.450
, pp. 131-134
-
-
Kolpashchikov, D.M.1
Weisshart, K.2
Nasheuer, H.-P.3
Khodyreva, S.N.4
Fanning, E.5
Favre, A.6
Lavrik, O.I.7
-
27
-
-
1642469653
-
-
Novosibirsk: IC&G
-
Pestryakov P., Weisshart K., Khodyreva S.N., Nasheuer H.-P., Lavrik O.I. 2002. In Proceedings of the third international conference on bioinformatics of genome regulation and structure. Novosibirsk: IC&G, 4, 28-30.
-
(2002)
Proceedings of the Third International Conference on Bioinformatics of Genome Regulation and Structure
, vol.4
, pp. 28-30
-
-
Pestryakov, P.1
Weisshart, K.2
Khodyreva, S.N.3
Nasheuer, H.-P.4
Lavrik, O.I.5
-
28
-
-
0034823944
-
Localization of the large subunit of replication factor C near the 5′ end of DNA primers
-
Kolpashchikov D.M., Hughes P., Favre A., Baldacci G., Lavrik O.I. 2001. Localization of the large subunit of replication factor C near the 5′ end of DNA primers. J. Mol. Recognit. 14, 239-244.
-
(2001)
J. Mol. Recognit.
, vol.14
, pp. 239-244
-
-
Kolpashchikov, D.M.1
Hughes, P.2
Favre, A.3
Baldacci, G.4
Lavrik, O.I.5
-
29
-
-
0031104841
-
The FEN-1 family of structure-specific nucleases in eukaryotic DNA replication, recombination and repair
-
Lieber M.R. 1997. The FEN-1 family of structure-specific nucleases in eukaryotic DNA replication, recombination and repair. Bioessays. 19, 233-240.
-
(1997)
Bioessays
, vol.19
, pp. 233-240
-
-
Lieber, M.R.1
-
30
-
-
1642551330
-
-
Novosibirsk: IC&G
-
Khodyreva S.N., Nazarkina J.K., Petruseva I.O., Safronov I.V., Lavrik O.I. 2002. In Proceedings of the third international conference on bioinformatics of genome regulation and structure. Novosibirsk: IC&G, 4, 13-15.
-
(2002)
Proceedings of the Third International Conference on Bioinformatics of Genome Regulation and Structure
, vol.4
, pp. 13-15
-
-
Khodyreva, S.N.1
Nazarkina, J.K.2
Petruseva, I.O.3
Safronov, I.V.4
Lavrik, O.I.5
-
31
-
-
0035816708
-
Photoaffinity labeling of mouse fibroblast enzymes by a base excision repair intermediate. Evidence for the role of poly(ADP-ribose) polymerase-1 in DNA repair
-
Lavrik O.I., Prasad R., Sobol R.W., Horton J.K., Ackerman E.J., Wilson S.H. 2001. Photoaffinity labeling of mouse fibroblast enzymes by a base excision repair intermediate. Evidence for the role of poly(ADP-ribose) polymerase-1 in DNA repair. J. Biol. Chem. 276, 25541-25548.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 25541-25548
-
-
Lavrik, O.I.1
Prasad, R.2
Sobol, R.W.3
Horton, J.K.4
Ackerman, E.J.5
Wilson, S.H.6
-
32
-
-
0035980003
-
DNA polymerase beta-mediated long patch base excision repair. Poly(ADP-ribose)polymerase-1 stimulates strand displacement DNA synthesis
-
Prasad R., Lavrik O.I., Kim S.J., Kedar P., Yang X.P., Vande Berg B.J., Wilson S.H. 2001. DNA polymerase beta-mediated long patch base excision repair. Poly(ADP-ribose)polymerase-1 stimulates strand displacement DNA synthesis. J. Biol. Chem. 276, 32411-32414.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 32411-32414
-
-
Prasad, R.1
Lavrik, O.I.2
Kim, S.J.3
Kedar, P.4
Yang, X.P.5
Vande Berg, B.J.6
Wilson, S.H.7
-
33
-
-
0037099067
-
Binary system for selective photoaffinity labeling of base excision repair DNA polymerases
-
Lavrik O.I., Kolpashchikov D.M., Prasad R., Sobol R.W., Wilson S.H. 2002. Binary system for selective photoaffinity labeling of base excision repair DNA polymerases. Nucleic Acids Res. 30, 73.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 73
-
-
Lavrik, O.I.1
Kolpashchikov, D.M.2
Prasad, R.3
Sobol, R.W.4
Wilson, S.H.5
|