Analysis of rDNA its sequences to determine genetic relationships among, and provide a basis for simplified diagnosis of, Fusarium species causing crown rot and head blight of cereals

Mycological Research

Volumn 107, Issue 7, 2003, Pages 811-821

  Tan, Mui Keng ^a   Niessen, Ludwig M ^b  

^a NSW DEPARTMENT OF PRIMARY INDUSTRIES   (Australia)

^b TECHNICAL UNIVERSITY OF MUNICH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; FUNGUS; IDENTIFICATION METHOD; PATHOGEN; TAXONOMY;

FUNGI; FUSARIUM; FUSARIUM AVENACEUM; FUSARIUM CEREALIS; FUSARIUM CULMORUM; FUSARIUM GRAMINEARUM; FUSARIUM OXYSPORUM; FUSARIUM POAE; FUSARIUM PSEUDEOGRAMINEARUM; FUSARIUM PSEUDOGRAMINEARUM; FUSARIUM SAMBUCINUM; FUSARIUM SOLANI; FUSARIUM TORULOSUM; FUSARIUM TRICINCTUM; FUSARIUM VENENATUM; FUSARIUM VERTICILLIOIDES; GIBBERELLA AVENACEA; GIBBERELLA MONILIFORMIS; GIBBERELLA PULICARIS; GIBBERELLA ZEAE; MYXOGASTRIA;

EID: 0042425843     PISSN: 09537562     EISSN: None     Source Type: Journal    
DOI: 10.1017/S0953756203008013     Document Type: Article

References (56)

1. Abbas, H. K., Mirocha, C. J. & Gunther, R. (1989) Mycotoxins produced by toxic Fusarium isolates obtained from agricultural and nonagricultural areas (arctic) of Norway. Mycopathologia 105: 143-151.
2. Aoki, T. & O'Donnell, K. (1999) Morphological and molecular characterization of Fusarium pseudograminearum sp nov., formerly recognized as the Group 1 population of F. graminearum. Mycologia 91: 597-609.
3. Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. G., Smith, J. A. & Struhl, K. (eds) (1996) Current Protocols in Molecular Biology. Vol. 2. John Wiley, New York.
4. Balmas, V. (1994) Root rot of wheat in Italy caused by Fusarium graminearum Group 1. Plant-Disease 78: 317.
5. Benyon, F. H. L., Burgess, L. W. & Sharp, P. J. (2000) Molecular genetic investigations and reclassification of Fusarium species in sections Fusarium and Roseum. Mycological Research 104: 1164-1174.
6. Bruns, T. D., White, T. J. & Taylor, J. W. (1991) Fungal molecular systematics. Annual Review of Ecology and Systematics 22: 525-564.
7. Burgess, L. W., Dodman, R. L., Pont, W. & Mayers, P. (1981) Fusarium diseases of wheat, maize and grain sorghum in eastern Australia. In Fusarium: diseases, biology and taxonomy (P. E. Nelson, T. A. Toussoun & R. J. Cook, eds): 64-76. Pennsylvania State University Press, University Park.
8. Burgess, L. W., Klein, T. A., Bryden, W. L. & Tobin, N. F. (1987) Head blight of wheat caused by Fusarium graminearum Group I in New South Wales in 1983. Australasian Plant Pathology 16: 72-78.
9. Burgess, L. W., Wearing, A. H. & Toussoun, T. A. (1975) Surveys of the Fusaria associated with crown rot of wheat in eastern Australia. Australian Journal of Agricultural Research 26: 791-799.
10. Cassini, R. (1981) Fusarium diseases of cereals in Western Europe. In Fusarium: Diseases, Biology and Taxonomy (P. E. Nelson, T. A. Toussoun & R. J. Cook, eds): 56-63. Pennsylvania State University Press, University Park.
11. Celetti, M. J., Johnston, H. W., Kimpinski, J., Platt, H. W. & Martin, R. A. (1990) Incidence of soil-borne plant pathogens isolated from barley and winter wheat, and other crops in the rotation, on Prince Edward Island. Plant Pathology 39: 606-611.
12. Chelkowski, J., Bateman, G. L. & Mirocha, C. J. (1999) Identification of toxigenic Fusarium species using PCR assays. Journal of Phytopathology 147: 307-311.
13. Chen, H. K., Wang, G. & Jiang, X. (1982) Studies on Fusarium species infecting spikes of wheat and barley in Zhejiang Province. Acta Phytopathologica Sinica 12: 1-12.
14. Cook, R. J. (1981) Fusarium diseases of wheat and other small grains in North America. In Fusarium: diseases, biology and taxonomy (P. E. Nelson, T. A. Toussoun & R. J. Cook, eds): 39-52. Pennsylvania State University Press, University Park.
15. Cosic, J., Jurkovic, D. & Drezner, G. (1999) Fusarium species found on wheat roots and stems in Eastern Croatia. Poljoprivreda 5: 7-12.
16. Doohan, F. M., Weston, G., Rezanoor, H. N., Parry, D. W. & Nicholson, P. (1999) Development and use of a reverse transcription-PCR assay to study expression of tri5 by Fusarium species in vitro and in planta. Applied and Environmental Microbiology 65: 3850-3854.
17. Dubin, H. J., Gilchrist, L., Reeves, L. & McNab, A. (eds) (1997) Fusarium Head Scab: global status and prospects. Centre International de Mejoramiento de Maiz y Trigo, Mexico City.
18. Francis, R. G. & Burgess, L. W. (1977) Characteristics of two populations of Fusarium roseum 'Graminearum' in eastern Australia. Transactions of the British Mycological Society 68: 421-427.
19. Gerlach, K. S., Bentley, S., Moore, N. Y., Pegg, K. G. & Aitken, A. B. (2000) Characterisation of Australian isolates of Fusarium oxysporum f.sp. cubense by DNA fingerprinting analysis. Australian Journal of Agricultural Research 51: 945-953.
20. Gilbert, J. & Tekauz, A. (2000) Review: recent developments in research on Fusarium head blight of wheat in Canada. Canadian Journal of Plant Pathology 22: 1-8.
21. Gordon, W. L. (1952) The occurrence of Fusarium species in Canada. II Prevalence and taxonomy of Fusarium species in cereal seed. Canadian Journal of Botany 30: 209-251.
22. Hacking, A., Rosser, W. R. & Dervish, M. T. (1976) Zearalenone-producing species of Fusarium on barley seed. Annals of Applied Biology 84: 7-11.
23. Hall, T. A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symposium Series 41: 95-98.
24. Hering, O. & Nirenberg, H. I. (1995) Differentiation of Fusarium sambucinum Fuckel sensu lato and related species by RAPD PCR. Mycopathologia 129: 159-164.
25. Huson, D. (1998) SPLITSTREE: a program for analysing and visualising evolutionary data. Bioinformatics 14: 68-73.
26. Huss, M. J., Campbell, C. L., Jennings, D. B. & Leslie, J. F. (1996) Isozyme variation among biological species in the Gibberella fujikuroi species complex (Fusarium section Liseola). Applied and Environmental Microbiology 62: 3750-3756.
27. Ichinoe, M., Kurata, H., Sugiura, Y. & Ueno, Y. (1983) Chemotaxonomy of Gibberella zeae with special reference to production of trichothecenes and zearalenone. Applied and Environmental Microbiology 46: 1364-1369.
28. Jurgenson, J. E., Bowden, R. L., Zeller, K. A., Leslie, J. F. & Alexander, N. J. (2002) A genetic map of Gibberella zeae (Fusarium graminearum). Genetics 160: 1451-1460.
29. Kutova, I. (1980) Fusarium wilt and root rot on tobacco. Rastitelna-Zashchita 28:28-31.
30. Láday, M. & Szécsi, A. (2001) Distinct electrophoretic isozyme profiles of Fusarium graminearum and closely related species. Systematic and Applied Microbiology 24: 67-75.
31. Láday, M., Bagi, F., Mesterhazy, A. & Szécsi, A. (2000) Isozyme evidence for two groups of Fusarium graminearum. Mycological Research 104: 788-793.
32. Mackinaite, R. & Strukcinskas, M. (1992) Micromycetes - causal agents of root rots of Medicago L. in Lithuania. I. Root rot agents of seed alfalfa. Ekologija 1: 98-106.
33. Marasas, W. F. O., Voigt, W. G. J., Lamprecht, S. C. & Wyk, P. S. van. (1988) Crown rot and head blight of wheat caused by Fusarium graminearum groups 1 and 2 in the southern Cape Province. Phytophylactica 20: 385-389.
34. Marasas, W. F. O., Rheeder, J. P., Lamprecht, S. C., Zeller, K. A. & Leslie, J. F. (2001) Fusarium andiyazi sp nov., a new species from sorghum. Mycologia 93: 1203-1210.
35. Nelson, P. E., Toussoun, T. A. & Cook, R. J. (eds) (1981) Fusarium: diseases, biology and taxonomy. Pennsylvania State University Press, University Park.
36. Niessen, M. L. & Vogel, R. F. (1997) Specific identification of Fusarium graminearum by PCR with gaoA targeted primers. Systematic and Applied Microbiology 20: 111-123.
37. Niessen, M. L. & Vogel, R. F. (1998) Group specific PCR-detection of potential trichothecene-producing Fusarium-species in pure cultures and cereal samples. Systematic and Applied Microbiology 21: 618-631.
38. Nirenberg, H. I. (1995) Morphological differentiation of Fusarium sambucinum Fuckel sensu stricto, F. torulosum (Berk. & Curt.) Nirenberg comb. nov. and F. venenatum Nirenberg sp. nov. Mycopathologia 129: 131-141.
39. O'Donnell, K. (1992) Ribosomal DNA internal transcribed spacers are highly divergent in the phytopathogenic ascomycete Fusarium sambucinum (Gibberella pulicaris). Current Genetics 22: 213-220.
40. O'Donnell, K. (2000) Molecular phylogeny of the Nectria haematococca-Fusarium solani species complex. Mycologia 92: 919-938.
41. O'Donnell, K., Cigelnik, E. & Nirenberg, H. I. (1998) Molecular systematics and phylogeography of the Gibberella fujikuroi species complex. Mycologia 90: 465-493.
42. O'Donnell, K., Kistler, H. C., Tacke, B. K. & Casper, H. H. (2000) Gene genealogies reveal global phylogeographic structure and reproductive isolation among lineages of Fusarium graminearum, the fungus causing wheat scab. Proceedings of the National Academy of Sciences, USA 97: 7905-7910.
43. Quellet, T. & Seifert, K. A. (1993) Genetic characterization of Fusarium graminearum strains using RAPD and PCR amplification. Phytopathology 83: 1003-1007.
44. Parry, D. W. & Nicholson, P. (1996) Development of a PCR assay to detect Fusarium poae in wheat. Plant Pathology 45: 383-391.
45. Polley, R. W., Turner, J. A., Cockerell, V., Robb, J., Scudamore, K. A., Sanders, M. F. & Magan, N. (1991) Surveys of Fusarium Species Infecting Winter Wheat in England, Wales and Scotland. [Home Grown Cereals Authority Report No. 39.] Home Grown Cereals Authority Publication, London.
46. Samuels, G. J. & Seifert, K. A. (1995) The impact of molecular characters on systematics of filamentous ascomycetes. Annual Review of Phytopathology 33: 37-67.
47. Schilling, A. G., Moller, E. M. & Geiger, H. H. (1996a) Polymerase chain reaction-based assays for species-specific detection of Fusarium culmorum, F. graminearum, and F. avenaceum. Phytopathology 86: 515-522.
48. Schilling, A. G., Moller, E. M. & Geiger, H. H. (1996b) Molecular differentiation and diagnosis of the cereal pathogens Fusarium culmorum and F. graminearum. Sydowia 48: 71-82.
49. (R) Green I for continuous fluorescence monitoring. International Journal of Food Microbiology 71: 53-61.
50. Swofford, D. L. (1998) PAUP*: phylogenetic analysis using parsimony (* and other methods). Version 4. Sinauer Associates, Sunderland, MA.
51. Sydenham, E. W., Marasas, W. F. O., Thiel, P. G., Shephard, G. S. & Nieuwenhuis, J. J. (1991) Production of mycotoxins by selected Fusarium graminearum and F. crookwellense isolates. Food Additives and Contaminants 8: 31-41.
52. Tan, M. K., Timmer, L. W., Broadbent, P., Priest, M. &Cain, P. (1996) Differentiation by molecular analysis of Elsinoe spp. causing citrus scab diseases and its epidemiological implications. Phytopathology 86: 1039-1044.
53. Theron, D. J. & Holz, G. (1989) Fusarium species associated with dry and stem-end rot of potatoes in South Africa. Phytophylactica 21: 175-181.
54. Thrane, U. & Hansen, U. (1995) Chemical and physiological characterization of taxa in the Fusarium sambucinum complex. Mycopathologia 129: 183-190.
55. Turner, A. S., Lees, A. K., Rezanoor, H. N. & Nicholson, P. (1998) Refinement of PCR-detection of Fusarium avenaceum and evidence from DNA marker studies for phenetic relatedness to Fusarium tricinctum. Plant Pathology 47: 278-288.
56. Williams, K. J., Dennis, J. I., Smyl, C. & Wallwork, H. (2002) The application of species-specific assays based on the polymerase chain reaction to analyse Fusarium crown rot of durum wheat. Australasian Plant Pathology 31: 119-127.