Role of residue packing in protein folding

TrAC - Trends in Analytical Chemistry

Volumn 22, Issue 8, 2003, Pages 554-560

  Pattabiraman, Nagarajan ^a  

^a GEORGETOWN UNIVERSITY   (United States)

Author keywords

Amino acids; Occluded surface; Packing; Protein folding

Indexed keywords

PROTEINS;

RESIDUE PACKING;

BIOLOGY;

ALANINE; AMINO ACID; ARGININE; ASPARAGINE; ASPARTIC ACID; CYSTEINE; GLOBULAR PROTEIN; GLUTAMIC ACID; GLUTAMINE; GLYCINE; HISTIDINE; ISOLEUCINE; LEUCINE; LYSINE; METHIONINE; PHENYLALANINE; SERINE; THREONINE; TRYPTOPHAN; TYROSINE; VALINE;

AMINO ACID SEQUENCE; ANALYTIC METHOD; CONFERENCE PAPER; DNA PACKAGING; PRIORITY JOURNAL; PROTEIN FOLDING; PROTEIN FUNCTION; PROTEIN PROTEIN INTERACTION; PROTEIN STRUCTURE; THREE DIMENSIONAL IMAGING;

EID: 0042379637     PISSN: 01659936     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0165-9936(03)00906-3     Document Type: Conference Paper

References (25)

1. Levinthal C.J. J. Chim. Phys. Phys.-Chim. Biol. 65:1965;44.
2. Covell D.G., Jernigan R.L. Biochemistry. 29:1990;3287.
3. Skolnick J., Kolinski A., Brooks C.L., Godzik A., Rey A. Curr. Biol. 3:1993;414.
4. Raghunathan G., Jernigan R.L. Protein Sci. 10:1997;2072.
5. Dinner A.R., Karplus M. J. Mol. Biol. 292:1999;403.
6. Mirny L.A., Shakhnovich E.I. J. Mol. Biol. 264:1996;1164.
7. Hao M.H., Scheraga H.A. Proc. Natl. Acad. Sci. USA. 93:1996;4984.
8. Pillardy J., Czaplewski C., Liwo A., Lee A.J., Ripoll D.R., Kamierkiewicz R., Oldziej S., Wedemeyer W.J., Gibson K.D., Arnautova Y.A.et al. Proc. Natl. Acad. Sci. USA. 98:2001;2329.
9. Simons K., Strauss C., Baker D. J. Mol. Biol. 306:2001;1191.
10. Irback A., Sjunnesson F., Wallin S. Proc. Natl. Acad. Sci. USA. 97:2000;13614.
11. Richards F.M., Lim W.A. Q. Rev. Biophys. 26:1994;423.
12. Marti-Renom M.A., Stote R.H., Querol E., Aviles F.X., Karplus M. J. Mol. Biol. 284:1998;145.
13. Daggett V. Acc. Chem. Res. 35:2002;422.
14. Berman H.M., Westbrook J., Feng Z., Gilliland G., Bhat T.N., Weissig H., Shindyalov I.N., Bourne P.E. Nucleic Acids Res. 28:2000;235.
15. Miyazawa S., Jernigan R.L. J. Mol. Biol. 256:1996;623.
16. R. Luthy, J.U. Bowie, D. Eisenburg, 356 (1992) 83.
17. Gregoret L.M., Cohen F.E. J. Mol. Biol. 211:1990;959.
18. Pattabiraman N., Ward K.B., Fleming P. J. Mol. Recog. 8:1995;334.
19. Connolly M.L. Science (Washington, DC). 221:1983;709.
20. Fleming P.J., Richards F.M. J. Mol. Biol. 299:2000;487.
21. Ratnaparkhi G.S., Ramachandran S., Udganokar J.B., Varadarajan R. Biochemistry. 37:1998;6958.
22. Fleming K.G., Ackerman A.L., Engelman D.M. J. Mol. Biol. 272:1997;266.
23. DeDecker B.S., O'Brien R., Fleming P.J., Geiger J.H., Jackson S.P., Sigler P.B. J. Mol. Biol. 264:1996;1072.
24. Pattabiraman N. J. Med. Chem. 42:1999;3821.
25. Levitt M. J. Mol. Biol. 104:1976;59.