메뉴 건너뛰기




Volumn 59, Issue 3, 2003, Pages 476-486

Bayesian shrinkage estimation of the relative abundance of mRNA transcripts using SAGE

Author keywords

Bayesian methods; Bioinformatics; Mixture distributions; Multinomial distribution; SAGE; Shrinkage estimators

Indexed keywords

BAYESIAN NETWORKS; FREQUENCY ESTIMATION; GENE EXPRESSION; SHRINKAGE; TISSUE;

EID: 0042334741     PISSN: 0006341X     EISSN: None     Source Type: Journal    
DOI: 10.1111/1541-0420.00057     Document Type: Article
Times cited : (18)

References (18)
  • 1
    • 0030681260 scopus 로고    scopus 로고
    • The significance of digital gene expression profiles
    • Audic, S. and Claverie, J. M. (1997). The significance of digital gene expression profiles. Genome Research 7, 986-995.
    • (1997) Genome Research , vol.7 , pp. 986-995
    • Audic, S.1    Claverie, J.M.2
  • 2
    • 0043009767 scopus 로고    scopus 로고
    • Differential expression in SAGE: Accounting for normal between-library variation
    • to appear
    • Baggerly, K. A., Deng, L., Morris, J. S., and Aldez, C. M. (2003). Differential expression in SAGE: Accounting for normal between-library variation. Bioinformatics, to appear.
    • (2003) Bioinformatics
    • Baggerly, K.A.1    Deng, L.2    Morris, J.S.3    Aldez, C.M.4
  • 4
    • 85153185223 scopus 로고    scopus 로고
    • Denoising SAGE libraries: A mixture model approach
    • to appear
    • Blades, N., Kern, S., Jones, J., and Parmigiani, G. (2003). Denoising SAGE libraries: A mixture model approach. Bioinformatics, to appear.
    • (2003) Bioinformatics
    • Blades, N.1    Kern, S.2    Jones, J.3    Parmigiani, G.4
  • 6
    • 0034800372 scopus 로고    scopus 로고
    • Detecting the impact of sequencing errors on SAGE data
    • Colinge, J. and Feger, G. (2001). Detecting the impact of sequencing errors on SAGE data. Bioinformatics 17(9), 840-842.
    • (2001) Bioinformatics , vol.17 , Issue.9 , pp. 840-842
    • Colinge, J.1    Feger, G.2
  • 7
    • 0000497169 scopus 로고
    • Minimax multiple shrinkage estimation
    • George, E. I. (1986). Minimax multiple shrinkage estimation. Annals of Statistics 14, 188-205.
    • (1986) Annals of Statistics , vol.14 , pp. 188-205
    • George, E.I.1
  • 8
    • 0000803388 scopus 로고
    • The population frequencies of species and the estimation of population parameters
    • Good, I. J. (1953). The population frequencies of species and the estimation of population parameters. Biometrika 40, 237-264.
    • (1953) Biometrika , vol.40 , pp. 237-264
    • Good, I.J.1
  • 10
    • 0017220998 scopus 로고
    • The expression of three abundance classes of messenger RNA in mouse tissues
    • Hastie, N. D. and Bishop, J. O. (1976). The expression of three abundance classes of messenger RNA in mouse tissues. Cell 9, 761-774.
    • (1976) Cell , vol.9 , pp. 761-774
    • Hastie, N.D.1    Bishop, J.O.2
  • 13
    • 0035555690 scopus 로고    scopus 로고
    • Distribution associated with stochastic processes of gene expression in a single eukaryotic cell
    • Kuznetsov, V. A. (2001). Distribution associated with stochastic processes of gene expression in a single eukaryotic cell. EURASIP Journal on Applied Signal Processing 4, 285-296.
    • (2001) EURASIP Journal on Applied Signal Processing , vol.4 , pp. 285-296
    • Kuznetsov, V.A.1
  • 14
    • 0030823821 scopus 로고    scopus 로고
    • SAGE transcript profiles for p53-dependent growth regulation
    • Madden, S. L., Galella, E. A., Zhu, J., Bertelsen, A. H., and Beaudry, G. A. (1997). SAGE transcript profiles for p53-dependent growth regulation. Oncogene 5, 1079-1085.
    • (1997) Oncogene , vol.5 , pp. 1079-1085
    • Madden, S.L.1    Galella, E.A.2    Zhu, J.3    Bertelsen, A.H.4    Beaudry, G.A.5
  • 15
    • 0035367507 scopus 로고    scopus 로고
    • Gene discovery using the serial analysis of gene expression technique: Implications for cancer research
    • Polyak, K. and Riggins, G. J. (2001). Gene discovery using the serial analysis of gene expression technique: Implications for cancer research. Journal of Clinical Oncology 19, 2948-2958.
    • (2001) Journal of Clinical Oncology , vol.19 , pp. 2948-2958
    • Polyak, K.1    Riggins, G.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.