Phylogenetic relationships in Cyperaceae subfamily Mapanioideae inferred from pollen and plastid DNA sequence data

American Journal of Botany

Volumn 90, Issue 7, 2003, Pages 1071-1086

  Simpson, David A ^a   Furness, Carol A ^a   Hodkinson, Trevor R ^b   Muasya, A Muthama ^c   Chase, Mark W ^a  

^a ROYAL BOTANIC GARDENS   (United Kingdom)

^b TRINITY COLLEGE DUBLIN   (Ireland)

^c INSTITUTE OF PRIMATE RESEARCH   (Kenya)

Author keywords

Chrysitricheae; Cyperaceae; Hypolytreae; Mapanioideae; Phylogenetics; Pollen; Pseudomonad; rps16; trnL F

Indexed keywords

DNA; PHYLOGENY; PLASTID; POLLEN;

CAPITULARINA; CYPERACEAE; EMBRYOPHYTA; EXOCAIYA; JUNCACEAE; LILIOPSIDA; MAPANIA; THURNIACEAE;

EID: 0042266910     PISSN: 00029122     EISSN: None     Source Type: Journal    
DOI: 10.3732/ajb.90.7.1071     Document Type: Article

References (61)

1. ALVES, M. C., AND W. W. THOMAS. 2002. Four new species of Hypolytrum Rich. (Cyperaceae) from Costa Rica and Brazil. Feddes Repertorium 113: 261-270.
2. ANDERSON, J. S. 2001. The phylogenetic trunk: maximal inclusion of taxa with missing data in an analysis of the Lepospondyli (Vertebrata, Tetrapoda). Systematic Biology 50: 170-193.
3. BROWN, R. C., AND B. E. LEMMON. 2000. The cytoskeleton and polarization during pollen development in Carex blanda (Cyperaceae). American Journal of Botany 87: 1-11.
4. BRUHL, J. J. 1995. Sedge genera of the world: relationships and a new classification of the Cyperaceae. Austalian Systematic Botany 8: 125-305.
5. CARNIEL, K. 1962. Beiträge zur Entwicklungsgeschichte des sporogonen Gewebes der Gramineen und Cyperaceen. II. Cyperaceae. Österreichisches Botanisches Zeitschrift 109: 81-95.
6. CRANWELL, L. M. 1953. New Zealand pollen studies. The monocotyledons. Bulletin. Auckland Institute and Museum 3: 1-91.
7. DAHLGREN, R. M. T., H. T. CLIFFORD, AND P. F. YEO. 1985. The families of monocotyledons. Springer-Verlag, Berlin, Germany.
8. DOYLE, J. J., AND J. L. DOYLE. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemical Bulletin 19: 11-15.
9. DUNBAR, A. 1973. Pollen development in the Eleocharis palustris group (Cyperaceae). I. Ultrastructure and ontogeny. Botaniska Notiser 126: 197-254.
10. ERDTMAN, G. 1944. Pollen morphology and plant taxonomy. II. Notes on some monocotyledonous pollen types. Svensk Botanisk Tidskrift 38: 163-168.
11. ERDTMAN, G. 1952. Pollen morphology and plant taxonomy. Angiosperms. Almqvist and Wicksell, Stockholm, Sweden.
12. FELSENSTEIN, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-783.
13. FITCH, W. M. 1971. Toward defining the course of evolution: minimum change for a specific tree topology. Systematic Zoology 20: 406.
14. FURNESS, C. A., AND P. J. RUDALL. 1999. Microsporogenesis in monocotyledons. Annals of Botany 84: 475-499.
15. FURNESS, C. A., AND P. J. RUDALL. 2000. The systematic significance of simultaneous cytokinesis during microsporogenesis in monocotyledons. In K. L. Wilson and D. A. Morrison [eds.], Monocots: systematics and evolution, 189-193. CSIRO, Melbourne, Victoria, Australia.
16. GLAUERT, A. M. 1975. Fixation, dehydration and embedding of biological specimens. Practical methods in electron microscopy, vol. 3, part 1. North-Holland, Amsterdam, Netherlands.
17. GOETGHEBEUR, P. 1986. Genera Cyperacearum. Ph.D. dissertation. University of Ghent, Belgium.
18. GOETGHEBEUR, P. 1998. Cyperaceae. In K. Kubitzki [ed.], The families and genera of vascular plants, vol. 4, 141-190. Springer-Verlag, Berlin, Germany.
19. HAINES, R. W., AND K. A. LYE. 1976. Studies in African Cyperaceae 14. The genus Hellmuthia Steud. Botaniska Notiser 129: 61-67.
20. HAINES, R. W., AND K. A. LYE. 1983. The sedges and rushes of East Africa. East African Natural History Society, Nairobi, Kenya.
21. HODKINSON, T. R., M. W. CHASE, D. LLEDO, N. SALAMIN, AND S. A. RENVOIZE. 2002a. Molecular phylogeny of Miscanthus s.l., Saccharuin and related genera (Saccharinae, Andropogoneae, Poaceae) using DNA sequences from the ITS nuclear ribosomal DNA and the plastid trnL-F regions. Journal of Plant Research 115: 381-392.
22. HODKINSON, T. R., M. W. CHASE, C. TAKAHASHI, I. J. LEITCH, M. D. BENNETT, AND S. A. RENVOIZE. 2002b. The use of DNA sequencing (ITS and trnL-F), AFLP and fluorescent in-situ hybridization to study allopolyploid Miscanthus (Poaceae). American Journal of Botany 89: 279-286.
23. HOLTTUM, R. 1948. The spikelet in Cyperaceae. Botanical Review 14: 525-541.
24. HYDE, H. A. 1955. Oncus, a new term in pollen morphology. New Phytologist 54: 255-256.
25. JUEL, H. O. 1900. Beiträge zur Kenntniss der Tetradentheilung. Jahrbuch für Wissenschaftliche Botanik 35: 626-659.
26. KERN, J. H. 1974. Cyperaceae. In C. G. G. J. van Steenis [ed.], Flora Malesiana series 1, 7(3): 435-753.
27. KHANNA, P. 1963. Male gemetophyte and obturator in Cyperus rotundus L., and C. triceps Endl. (= Kyllinga triceps Rottb.). Current Science 32: 133-134.
28. KIRPES, C. C., L. G. CLARK, AND N. R. LERSTEN. 1996. Systematic significance of pollen arrangement in microsporangia of Poaceae and Cyperaceae: review and observations on representative taxa. American Journal of Botany 83: 1609-1622.
29. KOYAMA, T. 1969. Delimitation and classification of the Cyperaceae-Mapanioideae. In J. E. Gunkel [ed.], Current topics in plant science, 201-228. Academic Press, New York, New York, USA.
30. KOYAMA, T. 1970. The American species of the genus Hypolytrum (Cyperaceae). Darwiniana 16: 49-92.
31. KUKKONEN, I. 1984. On the inflorescence structure in the family Cyperaceae. Annales Botanici Fennici 21: 257-264.
32. LAMBERT, A. M. 1970. Formation et différenciation des grains de pollen chex les luzules (structures et ultrastructures). Bulletin de L'Académie et de la Société Lorraine des Sciences 9: 147-149.
33. LOROUGNON, G. 1973. Le vecteur pollinique chez les Mapania et les Hypolytrum Cypéracées de sous-bois des forêts tropicales ombrophiles. Bulletin Jardin Botanique National de Belgique 43: 33-36.
34. MAKDE, K. H. 1982. Pollen development in the Cyperaceae. Journal of the Indian Botanical Society 61: 242-249.
35. MEYER, N., AND A. S. YAROSHEVSKAYA. 1976. The phylogenetic significance of the development of pollen grain walls in Liliaceae, Juncaceae and Cyperaceae. In I. K. Ferguson and J. Muller [eds.], The evolutionary significance of the exine, 91-100. Academic Press, London, UK.
36. MUASYA, A. M., J. J. BRUHL, D. A. SIMPSON, A. CULHAM, AND M. W. CHASE. 2000. Suprageneric phylogeny of Cyperaceae: a combined analysis. In K. L. Wilson and D. A. Morrison [eds.], Monocots: systematics and evolution, 593-601. CSIRO, Melbourne, Victoria, Australia.
37. MUASYA, A. M., AND D. A. SIMPSON. 2002. A monograph of the genus Isolepis. Kew Bulletin 56: 257-362.
38. MUASYA, A. M., D. A. SIMPSON, M. W. CHASE, AND A. CULHAM. 1998. An assessment of suprageneric phylogeny in Cyperaceae using rbcL DNA sequences. Plant Systematics and Evolution 211: 257-271.
39. OXELMANN, B., M. LIDÉN, AND D. BERGLUND. 1997. Chloroplast rps16 intron phylogeny of the tribe Sileneae (Caryophyllaceae). Plant Systematics and Evolution 206: 393-410.
40. PREUSS, D., S. Y. RHEE, AND R. W. DAVIS. 1994. Tetrad analysis is possible in Arabidopsis with mutation of the QUARTET (QRT) genes. Science 264: 1458-1460.
41. RANGANATH, R. M., AND N. RAO NAGASHREE. 2000. Selective cell elimination during microsporogenesis in sedges. Sexual Plant Reproduction 13: 53-60.
42. REEVES, G., M. W. CHASE, P. GOLDBLATT, P. RUDALL, M. F. FAY, A. V. COX, B. LEJEUNE, AND T. SOUSA-CHIES. 2001. Molecular systematics of Iridaceae: evidence from four plastid DNA regions. American Journal of Botany 88: 2074-2087.
43. REYNOLDS, E. S. 1963. The use of lead citrate at high pH as an electron opaque stain in electron microscopy. Journal of Cell Biology 17: 208-212.
44. SELLING, O. H. 1947. Studies in Hawaiian pollen statistics. II. The pollens of Hawaiian phanerogams. Bishop Museum special publication 38. Bishop Museum, Honolulu, Hawaii, USA.
45. SHARMA, M. 1967. Pollen morphology of Indian monocotyledons. Journal of Palynology Special Volume. Palynological Society of India, Lucknow, India.
46. SIMPSON, D. A. 1992. A revision of the genus Mapania. Royal Botanic Gardens, Kew, Surrey, UK.
47. SIMPSON, D. A. 1995. Relationships within Cyperales. In P. Rudall, P. J. Cribb, D. F. Cutler, and C. J. Humphries [ eds.], Monocotyledons: systematics and evolution, vol. 2, 497-509. Royal Botanic Gardens, Kew, Surrey, UK.
48. SIMPSON, D. A. 1996. New taxa and combinations in Mapania (Cyperaceae) from South America. Kew Bulletin 51: 729-740.
49. SIMPSON, D. A., AND C. A. INGLIS. 2001. Cyperaceae of economic, ethnobotanical and horticultural importance: a checklist. Kew Bulletin 56: 257-360.
50. SIMPSON, D. A., AND T. KOYAMA. 1998. Cyperaceae. In T. Santisuk and K. Larsen [eds.], Flora of Thailand, vol. 6, 247-485. Royal Forest Department, Bangkok, Thailand.
51. SMITH-WHITE, S. 1959. Pollen development patterns in Epacridaceae: a problem in cytoplasm-nucleus interaction. Proceedings of the Linnean Society of New South Wales 84: 8-35.
52. STRANDHEDE, S. O. 1973. Pollen development in the Eleocharis palustris group (Cyperaceae). II. Cytokinesis and microspore degeneration. Botaniska Notiser 126: 255-265.
53. SWOFFORD, D. L. 1998. PAUP*: phylogenetic analysis using parsimony (*and other methods), version 4. Sinauer Associates, Sunderland, Massachusetts, USA.
54. TABERLET, P., L. GIELLY, G. PAUTOU, AND J. BOUVET. 1991. Universal primers for the amplification of three non-coding regions of the chloroplast DNA. Plant Molecular Biology 17: 1105-1109.
55. TANAKA, N. 1939. Chromosome studies in Cyperaceae. V. Pollen development of Carex grallatoria Maxim. var. Heteroclita Kük. ex Matsum. Japanese Journal of Genetics 15: 153-157.
56. TANAKA, N. 1941. Chromosome studies in Cyperaceae. XII. Pollen development in five genera with special reference to Rhynchospora. Botanical Magazine, Tokyo 55: 55-65.
57. TWELL, D., S. K. PARK, AND E. LALANNE. 1998. Asymmetric division and cell-fate determination in developing pollen. Trends in Plant Science 3: 305-310.
58. VAN WICHELEN, J., K. CAMELBEKE, P. CHAERLE, P. GOETGHEBEUR, AND S. HUYSMANS. 1999. Comparison of different treatments for LM and SEM studies and systematic value of pollen grains in Cyperaceae. Grana 38: 50-58.
59. WIENS, J. J. 1998. Does adding characters with missing data increase or decrease phylogenetic accuracy? Systematic Biology 47: 625-640.
60. WILKINSON, M. 1995. Coping with multiple missing entries in phylogenetic inference using parsimony. Systematic Biology 44: 501-514.
61. YODER, A. D., J. A. IRWIN, AND B. A. PAYSEUR. 2001. Failure of the ILD to determine data combinability for slow loris phylogeny. Systematic Biology 50: 108-121.