메뉴 건너뛰기




Volumn 1, Issue 3, 2003, Pages 215-237

Text mining neuroscience journal articles to populate neuroscience databases

Author keywords

Databases; Natural language processing; Neuroscience; Supervised and unsupervised learning; Text mining

Indexed keywords

ARTICLE; COMPUTER PROGRAM; DATA BASE; INFORMATION PROCESSING; MEDICAL INFORMATICS; MEDICAL INFORMATION SYSTEM; NEUROSCIENCE; PRIORITY JOURNAL; VALIDATION PROCESS;

EID: 0042230987     PISSN: 15392791     EISSN: None     Source Type: Journal    
DOI: 10.1385/NI:1:3:215     Document Type: Article
Times cited : (17)

References (37)
  • 2
    • 0035752429 scopus 로고    scopus 로고
    • Effective mapping of biomedical text to the UMLS Metathesaurus: The MetaMap program
    • Washington DC
    • Aronson A. (2001) Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program. Proc. Am. Med. Inform. Assn. Symp. Washington DC, pp. 17-21.
    • (2001) Proc. Am. Med. Inform. Assn. Symp. , pp. 17-21
    • Aronson, A.1
  • 4
    • 0020338405 scopus 로고
    • Purification of a new neurotrophic factor from mammalian brain
    • Barde Y. A., Edgar D. and Thoenen H. (1982) Purification of a new neurotrophic factor from mammalian brain. EMBO. 1, 549-553.
    • (1982) EMBO , vol.1 , pp. 549-553
    • Barde, Y.A.1    Edgar, D.2    Thoenen, H.3
  • 5
    • 0030880487 scopus 로고    scopus 로고
    • Dopaminergic modulation of sodium current in hippocampal neurons via cAMP-Dependent phosphorylation of specific sites in the sodium channel a subunit
    • Cantrell A. R., Smith R. D., Goldin A. L., Scheuer T., and Catterall W. A. (1997) Dopaminergic Modulation of Sodium Current in Hippocampal Neurons via cAMP-Dependent Phosphorylation of Specific Sites in the Sodium Channel a Subunit. J. Neurosci. 17, 7330-7338.
    • (1997) J. Neurosci. , vol.17 , pp. 7330-7338
    • Cantrell, A.R.1    Smith, R.D.2    Goldin, A.L.3    Scheuer, T.4    Catterall, W.A.5
  • 6
    • 0030612655 scopus 로고    scopus 로고
    • 2+ partially rescues synaptic transmission in hippocampal cultures treated with botulinum toxin A and C, but not tetanus toxin
    • 2+ Partially Rescues Synaptic Transmission in Hippocampal Cultures Treated with Botulinum Toxin A and C, But Not Tetanus Toxin. J. Neurosci. 17, 7190-7202.
    • (1997) J. Neurosci. , vol.17 , pp. 7190-7202
    • Capogna, M.1    McKinney, R.A.2    O'Connor, V.3    Gähwiler, B.H.4    Thompson, S.M.5
  • 7
    • 0031023454 scopus 로고    scopus 로고
    • Membrane and synaptic properties of mitral cells in slices of rat olfactory bulb
    • Chen W. R. and Shepherd G. M. (1997) Membrane and synaptic properties of mitral cells in slices of rat olfactory bulb. Brain Res. 745, 189-196.
    • (1997) Brain Res. , vol.745 , pp. 189-196
    • Chen, W.R.1    Shepherd, G.M.2
  • 9
    • 0025281244 scopus 로고
    • High agreement but low kappa: II. Resolving the paradoxes
    • Cicchetti D. V. and Feinstein A. R. (1990) High agreement but low kappa: II. Resolving the paradoxes. J. Clin. Epidemiol. 43, 551-558.
    • (1990) J. Clin. Epidemiol. , vol.43 , pp. 551-558
    • Cicchetti, D.V.1    Feinstein, A.R.2
  • 10
    • 0022459849 scopus 로고
    • A light and electron microscopy study analysis of the mossy fibers of the rat dentate gyrus
    • Claiborne B. J., Amaral D. G., and Cowan W. M. (1986) A light and electron microscopy study analysis of the mossy fibers of the rat dentate gyrus. J. Comp. Neurol. 246, 435-458.
    • (1986) J. Comp. Neurol. , vol.246 , pp. 435-458
    • Claiborne, B.J.1    Amaral, D.G.2    Cowan, W.M.3
  • 11
    • 0036083910 scopus 로고    scopus 로고
    • Olfactory receptor database: A metadata driven automated population from sources of gene and protein sequences
    • Crasto C. J., Marenco L., Miller P. L., and Shepherd G. M. (2002) Olfactory receptor database: a metadata driven automated population from sources of gene and protein sequences. Nucl. Acids Res. 30, 354-360.
    • (2002) Nucl. Acids Res. , vol.30 , pp. 354-360
    • Crasto, C.J.1    Marenco, L.2    Miller, P.L.3    Shepherd, G.M.4
  • 13
    • 0035236048 scopus 로고    scopus 로고
    • GENIES: A natural-language processing system for extraction of molecular pathways from journal articles
    • Friedman C., Jra P., Yu H., Krauthammer M., and Rzhetsky A. (2001) GENIES: a natural-language processing system for extraction of molecular pathways from journal articles. Bioinformatics. 17, S74-S84.
    • (2001) Bioinformatics , vol.17
    • Friedman, C.1    Jra, P.2    Yu, H.3    Krauthammer, M.4    Rzhetsky, A.5
  • 14
    • 0036584009 scopus 로고    scopus 로고
    • Factors associated with success in searching MEDLINE and applying evidence to answer clinical questions
    • Hersh W. R., Crabtree M. K., Hickman D. H., et al. (2002) Factors Associated with Success in Searching MEDLINE and Applying Evidence to Answer Clinical Questions. J Am Med Inform Assn. 9, 283-293.
    • (2002) J. Am. Med. Inform. Assn. , vol.9 , pp. 283-293
    • Hersh, W.R.1    Crabtree, M.K.2    Hickman, D.H.3
  • 15
    • 0035229819 scopus 로고    scopus 로고
    • TextQuest: Document clustering of MEDLINE abstracts for concept discovery in molecular biology
    • Iliopoulos I., Enright A. J., and Ouzounis C. (2001) TextQuest: Document Clustering of MEDLINE Abstracts for Concept Discovery in Molecular Biology, Pacif. Symp. Biocomp. 6, 374-383.
    • (2001) Pacif. Symp. Biocomp. , vol.6 , pp. 374-383
    • Iliopoulos, I.1    Enright, A.J.2    Ouzounis, C.3
  • 16
    • 84974295346 scopus 로고
    • Technical terminology: Some linguistic properties and an algorithm for identification in text
    • Justeson J. S. and Katz S. (1995) Technical terminology: some linguistic properties and an algorithm for identification in text. Nat. Lang. Eng. 1, 9-27.
    • (1995) Nat. Lang. Eng. , vol.1 , pp. 9-27
    • Justeson, J.S.1    Katz, S.2
  • 18
    • 0035755281 scopus 로고    scopus 로고
    • Automatic MeSH term assignment and quality assessment
    • Washington DC
    • Kim W., Aronson A. R., and Wilbur W. J. (2001) Automatic MeSH term assignment and quality assessment Proc. Am. Med. Inform. Assn. Symb., Washington DC., pp. 310-323.
    • (2001) Proc. Am. Med. Inform. Assn. Symb. , pp. 310-323
    • Kim, W.1    Aronson, A.R.2    Wilbur, W.J.3
  • 20
    • 0034707204 scopus 로고    scopus 로고
    • Using BLAST for identifying gene and protein names injournal articles
    • Krauthammer M., Rzhetsky A., Morozov P., and Friedman C. (2000) Using BLAST for identifying gene and protein names injournal articles. Gene. 259, 245-252.
    • (2000) Gene , vol.259 , pp. 245-252
    • Krauthammer, M.1    Rzhetsky, A.2    Morozov, P.3    Friedman, C.4
  • 24
    • 0019393636 scopus 로고
    • Electrophysiological analysis of mitral cells in the isolated turtle olfactory bulb
    • Mori K., Nowycky M. C., and Shepherd G. M. (1981) Electrophysiological analysis of mitral cells in the isolated turtle olfactory bulb. J. Physiol. (Lond.). 314, 281-294.
    • (1981) J. Physiol. (Lond.) , vol.314 , pp. 281-294
    • Mori, K.1    Nowycky, M.C.2    Shepherd, G.M.3
  • 25
    • 0035180309 scopus 로고    scopus 로고
    • Use of general-purpose negation detection to augment concept indexing of medical documents
    • Mutalik P. G., Deshpande A., and Nadkarni P. (1999) Use of General-purpose Negation Detection to Augment Concept Indexing of Medical Documents. J. Am. Med. Inform. Assoc. 8, 598-609.
    • (1999) J. Am. Med. Inform. Assoc. , vol.8 , pp. 598-609
    • Mutalik, P.G.1    Deshpande, A.2    Nadkarni, P.3
  • 27
    • 0004263661 scopus 로고
    • Harper-Collins, London
    • Pinker S. (1994) The Language Instinct, Harper-Collins, London, pp. 177-178.
    • (1994) The Language Instinct , pp. 177-178
    • Pinker, S.1
  • 28
    • 0032715577 scopus 로고    scopus 로고
    • Linguini: Language indentification for multilingual documents
    • Prager J. M. (1999) Linguini: Language Indentification for Multilingual Documents. Proc. 32nd Hawaii Int. Sys. 1-11.
    • (1999) Proc. 3nd Hawaii Int. Sys. , pp. 1-11
    • Prager, J.M.1
  • 29
    • 0030732142 scopus 로고    scopus 로고
    • Inhibition of synaptic transmission by neuropeptide Y in rat hippocampal area CA1: Modulation of presynaptic Ca2+ entry
    • Qian J., Colmers W. F., and Saggau P. (1997) Inhibition of Synaptic Transmission by Neuropeptide Y in Rat Hippocampal Area CA1: Modulation of Presynaptic Ca2+ Entry. J Neurosci. 17, 8169-8177.
    • (1997) J. Neurosci. , vol.17 , pp. 8169-8177
    • Qian, J.1    Colmers, W.F.2    Saggau, P.3
  • 30
    • 0024689801 scopus 로고
    • A critical investigation of recall and precision as measures of retrieval system performance
    • Raghavan V. V., Jung G. S., and Bolling P. (1989) A critical investigation of recall and precision as measures of retrieval system performance. ACM. Tr. Inform. Sys. 7, 205-229.
    • (1989) ACM. Tr. Inform. Sys. , vol.7 , pp. 205-229
    • Raghavan, V.V.1    Jung, G.S.2    Bolling, P.3
  • 31
  • 32
    • 0032212617 scopus 로고    scopus 로고
    • The human brain project: Neuroinformatics tools for integrating, searching and modeling multidisciplinary neuroscience data
    • Shepherd G. M., Mirsky J. S., Healy M. D., et al. (1998) The Human Brain Project: neuroinformatics tools for integrating, searching and modeling multidisciplinary neuroscience data. Trends Neurosci. 21, 460-468.
    • (1998) Trends Neurosci. , vol.21 , pp. 460-468
    • Shepherd, G.M.1    Mirsky, J.S.2    Healy, M.D.3
  • 33
    • 0020387396 scopus 로고
    • A design-independent method for measuring the reliability of psychiatric diagnosis
    • Spitzer R. and Fleiss J. (1982) A design-independent method for measuring the reliability of psychiatric diagnosis. J. Psychiat. Res. 17, 335-342.
    • (1982) J. Psychiat. Res. , vol.17 , pp. 335-342
    • Spitzer, R.1    Fleiss, J.2
  • 34
    • 0032126379 scopus 로고    scopus 로고
    • + currents by 5HT1A and 5HT1D receptors in spinal neurons of Xenopus larvae
    • + currents by 5HT1A and 5HT1D receptors in spinal neurons of Xenopus larvae. J. Physiol. 510, 103-120.
    • (1998) J. Physiol. , vol.510 , pp. 103-120
    • Sun, Q.-Q.1    Dale, N.2
  • 36
    • 0030782394 scopus 로고    scopus 로고
    • Instantaneous perturbation of dentate interneuronal networks by a pressure wave-transient delivered to the neocortex
    • Toth Z., Hollrigel G. S., Gorcs T., and Soltesz, I. (1997) Instantaneous Perturbation of Dentate Interneuronal Networks by a Pressure Wave-Transient Delivered to the Neocortex. J. Neurosci. 17, 8106-8117.
    • (1997) J. Neurosci. , vol.17 , pp. 8106-8117
    • Toth, Z.1    Hollrigel, G.S.2    Gorcs, T.3    Soltesz, I.4
  • 37
    • 0035752436 scopus 로고    scopus 로고
    • Developing a test collection for biomedical word sense disambiguation
    • Washington DC
    • Weeber M., Mork J. and Aronson A. R. (2001) Developing a test collection for biomedical word sense disambiguation. Proc. Am. Med. Inform. Assn. Symp. Washington DC, 746-750.
    • (2001) Proc. Am. Med. Inform. Assn. Symp. , pp. 746-750
    • Weeber, M.1    Mork, J.2    Aronson, A.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.