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Volumn 20, Issue 3, 2003, Pages 245-261

The factors controlling microbial distribution and activity in the shallow subsurface

Author keywords

Distribution; Grain size; Microbial activity; Moisture; Scale; Subsurface; Vadose; Variation

Indexed keywords

AQUIFER POLLUTION; BIOREMEDIATION; GEOMICROBIOLOGY; MICROBIAL ACTIVITY; SEDIMENT CHEMISTRY; VADOSE ZONE;

EID: 0042074581     PISSN: 01490451     EISSN: None     Source Type: Journal    
DOI: 10.1080/01490450303877     Document Type: Article
Times cited : (26)

References (52)
  • 1
    • 0000991985 scopus 로고
    • Microbial biomass and activity in subsurface sediments from Vejen, Denmark
    • Albrechtsen HJ, Winding A. 1992. Microbial biomass and activity in subsurface sediments from Vejen, Denmark. Microb Ecol 23:303-317.
    • (1992) Microb Ecol , vol.23 , pp. 303-317
    • Albrechtsen, H.J.1    Winding, A.2
  • 2
    • 0017030513 scopus 로고
    • New approach to the cultivation of bacteria: 2-mercapto-ethanesulfonic acid (Hs-CoM)-dependent Methanobacterium ruminantium in a pressurized atmosphere
    • Balch WE, Wolfe RS. 1976. New approach to the cultivation of bacteria: 2-mercapto-ethanesulfonic acid (Hs-CoM)-dependent Methanobacterium ruminantium in a pressurized atmosphere. Appl Environ Microbiol 32:781-791.
    • (1976) Appl Environ Microbiol , vol.32 , pp. 781-791
    • Balch, W.E.1    Wolfe, R.S.2
  • 3
    • 0022374485 scopus 로고
    • Characterization of subsurface bacteria associated with two shallow aquifers in Oklahoma
    • Balkwill D, Ghiorse W. 1985. Characterization of subsurface bacteria associated with two shallow aquifers in Oklahoma. Appl Environ Microbiol 50:580-588.
    • (1985) Appl Environ Microbiol , vol.50 , pp. 580-588
    • Balkwill, D.1    Ghiorse, W.2
  • 4
    • 0002473895 scopus 로고
    • Equivalence of microbial biomass measures based on membrane lipid and cell wall components, adenosine triphosphate, and direct counts in subsurface samples
    • Balkwill D, Leach FR, Wilson JT, McNabb JF, White DC. 1988. Equivalence of microbial biomass measures based on membrane lipid and cell wall components, adenosine triphosphate, and direct counts in subsurface samples. Microb Ecol 16:73-84.
    • (1988) Microb Ecol , vol.16 , pp. 73-84
    • Balkwill, D.1    Leach, F.R.2    Wilson, J.T.3    McNabb, J.F.4    White, D.C.5
  • 5
    • 0031920965 scopus 로고    scopus 로고
    • Microbial communities in high and low recharge environments: Implications for microbial transport in the vadose zone
    • Balkwill D, Murphy EM, Fair DM, Ringelberg DB, White DC. 1998. Microbial communities in high and low recharge environments: implications for microbial transport in the vadose zone. Microb Ecol 35:156-171.
    • (1998) Microb Ecol , vol.35 , pp. 156-171
    • Balkwill, D.1    Murphy, E.M.2    Fair, D.M.3    Ringelberg, D.B.4    White, D.C.5
  • 6
    • 0019364877 scopus 로고
    • Physiology and biochemistry of aerobic hydrogen-oxidizing bacteria
    • Bowien B, Schlegel HG. 1981. Physiology and biochemistry of aerobic hydrogen-oxidizing bacteria. Ann Rev Microbiol 35:405-452.
    • (1981) Ann Rev Microbiol , vol.35 , pp. 405-452
    • Bowien, B.1    Schlegel, H.G.2
  • 7
    • 0030778941 scopus 로고    scopus 로고
    • Subsurface microbiological heterogeneity: Current knowledge, descriptive approaches and applications
    • Brockman FJ, Murray CJ. 1997. Subsurface microbiological heterogeneity: current knowledge, descriptive approaches and applications. FEMS Microbiol Rev 20:231-247.
    • (1997) FEMS Microbiol Rev , vol.20 , pp. 231-247
    • Brockman, F.J.1    Murray, C.J.2
  • 8
    • 0030779079 scopus 로고    scopus 로고
    • The influence of moisture on microbial transport, survival, and 2.4-D biodegradation with a genetically marked Burkholderia cepacia in unsaturated sediment columns
    • Cattaneo MV, Masson C, Greer CW. 1997. The influence of moisture on microbial transport, survival, and 2.4-D biodegradation with a genetically marked Burkholderia cepacia in unsaturated sediment columns. Biodegradation 8:87-96.
    • (1997) Biodegradation , vol.8 , pp. 87-96
    • Cattaneo, M.V.1    Masson, C.2    Greer, C.W.3
  • 9
    • 0025311782 scopus 로고
    • Rates of microbial metabolism in deep coastal plain aquifers
    • Chapelle FH, Lovley DR. 1990. Rates of microbial metabolism in deep coastal plain aquifers. Appl Environ Microbiol 56:1865-1874.
    • (1990) Appl Environ Microbiol , vol.56 , pp. 1865-1874
    • Chapelle, F.H.1    Lovley, D.R.2
  • 10
    • 0000077815 scopus 로고
    • Microbiological comparison of surface sediment and unsaturated subsurface sediment from a semiarid high desert
    • Colwell FS. 1989. Microbiological comparison of surface sediment and unsaturated subsurface sediment from a semiarid high desert. Appl Environ Microbiol 55:2420-2423.
    • (1989) Appl Environ Microbiol , vol.55 , pp. 2420-2423
    • Colwell, F.S.1
  • 12
    • 0020565747 scopus 로고
    • The inability of hydrogen bacteria to utilize atmospheric hydrogen is due to threshold and affinity for hydrogen
    • Conrad R, Aragno M, Seiler W. 1983. The inability of hydrogen bacteria to utilize atmospheric hydrogen is due to threshold and affinity for hydrogen. FEMS Microbiol Lett 18:207-210.
    • (1983) FEMS Microbiol Lett , vol.18 , pp. 207-210
    • Conrad, R.1    Aragno, M.2    Seiler, W.3
  • 13
    • 84983867311 scopus 로고
    • Bacteria in intertidal sediments: Factors related to their distribution
    • Dale, NG. 1974. Bacteria in intertidal sediments: factors related to their distribution. Limnol Oceanog 19:509-518.
    • (1974) Limnol Oceanog , vol.19 , pp. 509-518
    • Dale, N.G.1
  • 15
    • 0033006622 scopus 로고    scopus 로고
    • Development of radiographic and microscopic techniques for the characterization of bacterial transport in intact sediment cores from Oyster, Virginia
    • Dong H, Onstott TC, DeFlaun MF, Fuller ME, Gillespie KM, Fredrickson JK. 1999. Development of radiographic and microscopic techniques for the characterization of bacterial transport in intact sediment cores from Oyster, Virginia. J Microbiol Meth 37:139-154.
    • (1999) J Microbiol Meth , vol.37 , pp. 139-154
    • Dong, H.1    Onstott, T.C.2    DeFlaun, M.F.3    Fuller, M.E.4    Gillespie, K.M.5    Fredrickson, J.K.6
  • 16
    • 0036497342 scopus 로고    scopus 로고
    • Relative dominance of physical versus chemical effects on the transport of adhesion deficient bacteria in intact cores from South Oyster, VA
    • Dong H, Onstott TC, DeFlaun MF, Fuller ME, Streger SH, Rothmel RK, Mailloux BJ. 2002. Relative dominance of physical versus chemical effects on the transport of adhesion deficient bacteria in intact cores from South Oyster, VA. Environ Sci Technol 36:891-900.
    • (2002) Environ Sci Technol , vol.36 , pp. 891-900
    • Dong, H.1    Onstott, T.C.2    DeFlaun, M.F.3    Fuller, M.E.4    Streger, S.H.5    Rothmel, R.K.6    Mailloux, B.J.7
  • 17
    • 0032457609 scopus 로고    scopus 로고
    • Reduction of nitrate in clayey subsediments controlled by geochemical and microbial barriers
    • Ernstsen V, Binnerup SJ, Sorensen J. 1998. Reduction of nitrate in clayey subsediments controlled by geochemical and microbial barriers. Geomicrobiol J 15:195-207.
    • (1998) Geomicrobiol J , vol.15 , pp. 195-207
    • Ernstsen, V.1    Binnerup, S.J.2    Sorensen, J.3
  • 19
    • 0024849887 scopus 로고
    • Lithotrophic and heterotrophic bacteria in deep subsurface sediments and their relation to sediment properties
    • Fredrickson JK, Garland TR, Hicks RJ, Thomas JM, Li SW, McFadden KM. 1989. Lithotrophic and heterotrophic bacteria in deep subsurface sediments and their relation to sediment properties. Geomicrobiol J 7:53-66.
    • (1989) Geomicrobiol J , vol.7 , pp. 53-66
    • Fredrickson, J.K.1    Garland, T.R.2    Hicks, R.J.3    Thomas, J.M.4    Li, S.W.5    McFadden, K.M.6
  • 20
    • 0025919027 scopus 로고
    • Relationship between cell surface properties and transport of bacteria through sediment
    • Gannon JT, Manilal VB, Alexander M. 1991. Relationship between cell surface properties and transport of bacteria through sediment. Appl Environ Microbiol 57:190-193.
    • (1991) Appl Environ Microbiol , vol.57 , pp. 190-193
    • Gannon, J.T.1    Manilal, V.B.2    Alexander, M.3
  • 21
    • 0023757652 scopus 로고
    • Microbial ecology of the terrestrial subsurface
    • Ghiorse WC, Wilson JT. 1988. Microbial ecology of the terrestrial subsurface. Adv Appl Microbiol 33:107-172.
    • (1988) Adv Appl Microbiol , vol.33 , pp. 107-172
    • Ghiorse, W.C.1    Wilson, J.T.2
  • 23
    • 0000522843 scopus 로고
    • Phospholipid, ester linked fatty acid profiles as reproducible assays for changes in prokaryotic community structure of estuarine sediments
    • Guckert JB, Antworth CP, Nichols PD, White DC. 1985. Phospholipid, ester linked fatty acid profiles as reproducible assays for changes in prokaryotic community structure of estuarine sediments. FEMS Microbiol Ecol 31:147-158.
    • (1985) FEMS Microbiol Ecol , vol.31 , pp. 147-158
    • Guckert, J.B.1    Antworth, C.P.2    Nichols, P.D.3    White, D.C.4
  • 24
    • 0024797458 scopus 로고
    • Aerobic metabolic potential of microbial populations indigenous to deep subsurface environments
    • Hicks RJ, Fredrickson JK. 1989. Aerobic metabolic potential of microbial populations indigenous to deep subsurface environments. Geomicrobiol J 7:67-77.
    • (1989) Geomicrobiol J , vol.7 , pp. 67-77
    • Hicks, R.J.1    Fredrickson, J.K.2
  • 25
    • 0000689680 scopus 로고
    • Anaerobic metabolic processes in the deep terrestrial subsurface
    • Jones RE, Beeman RE, Suflita JM. 1989. Anaerobic metabolic processes in the deep terrestrial subsurface. Geomicrobiol J 7:117-130.
    • (1989) Geomicrobiol J , vol.7 , pp. 117-130
    • Jones, R.E.1    Beeman, R.E.2    Suflita, J.M.3
  • 26
    • 0027795867 scopus 로고
    • Microbial abundance and activities in relation to water potential in the vadose zones of arid and semiarid sites
    • Kieft TL, Amy PS, Brockman FJ, Fredrickson JK, Bjornstad BN, Rosaker LL. 1993. Microbial abundance and activities in relation to water potential in the vadose zones of arid and semiarid sites. Microb Ecol 26:59-78.
    • (1993) Microb Ecol , vol.26 , pp. 59-78
    • Kieft, T.L.1    Amy, P.S.2    Brockman, F.J.3    Fredrickson, J.K.4    Bjornstad, B.N.5    Rosaker, L.L.6
  • 27
    • 0028909038 scopus 로고
    • Characterization of populations of aerobic hydrogen oxidizing soil bacteria
    • Kluber HD, Lechner S, Conrad R. 1995. Characterization of populations of aerobic hydrogen oxidizing soil bacteria. FEMS Microbiol Ecol 16:167-176.
    • (1995) FEMS Microbiol Ecol , vol.16 , pp. 167-176
    • Kluber, H.D.1    Lechner, S.2    Conrad, R.3
  • 28
    • 0041726299 scopus 로고
    • 2nd ed. ASA-SSSA. Madison, WI: Sediment Science Society of America
    • Klute A. 1986. Methods of Sediment Analysis, part I, 2nd ed. ASA-SSSA. Madison, WI: Sediment Science Society of America.
    • (1986) Methods of Sediment Analysis , Issue.PART 1
    • Klute, A.1
  • 29
    • 0025919420 scopus 로고
    • Biodegradation of organic compounds in vadose zone and aquifer sediments
    • Konopka A, Turco R. 1991. Biodegradation of organic compounds in vadose zone and aquifer sediments. Appl Environ Microbiol 57:2260-2268.
    • (1991) Appl Environ Microbiol , vol.57 , pp. 2260-2268
    • Konopka, A.1    Turco, R.2
  • 30
    • 0030620638 scopus 로고    scopus 로고
    • Confined subsurface microbial communities in Cretaceous rock
    • Krumhol LR, McKinley JP, Ulrich GA, Suflita JM. 1997. Confined subsurface microbial communities in Cretaceous rock. Nature 386:64-66.
    • (1997) Nature , vol.386 , pp. 64-66
    • Krumhol, L.R.1    McKinley, J.P.2    Ulrich, G.A.3    Suflita, J.M.4
  • 31
    • 0000209741 scopus 로고
    • Organic matter mineralization with reduction of ferric iron in anaerobic sediments
    • Lovley DR, Phillips EJP. 1986. Organic matter mineralization with reduction of ferric iron in anaerobic sediments. Appl Environ Microbiol 51:683-689.
    • (1986) Appl Environ Microbiol , vol.51 , pp. 683-689
    • Lovley, D.R.1    Phillips, E.J.P.2
  • 32
    • 0000816704 scopus 로고
    • Rapid assay for microbially reducible ferric iron in aquatic sediments
    • Lovley DR, Phillips EJP. 1987. Rapid assay for microbially reducible ferric iron in aquatic sediments. Appl Environ Microbiol 53:1536-1540.
    • (1987) Appl Environ Microbiol , vol.53 , pp. 1536-1540
    • Lovley, D.R.1    Phillips, E.J.P.2
  • 34
    • 0030300655 scopus 로고    scopus 로고
    • Distribution of microbial activities and organic matter according to particle size in a humid savanna sediment (Lamto, Cote D'Ivoire)
    • Nacro HB, Bernest D, Abbadie L. 1997. Distribution of microbial activities and organic matter according to particle size in a humid savanna sediment (Lamto, Cote D'Ivoire). Sediment Biol Biochem 28:1687-1697.
    • (1997) Sediment Biol Biochem , vol.28 , pp. 1687-1697
    • Nacro, H.B.1    Bernest, D.2    Abbadie, L.3
  • 36
    • 84879882460 scopus 로고    scopus 로고
    • Iron oxide coatings on sand grains from the Atlantic coastal plain: High-resolution transmission electron microscopy
    • Penn RL, Zhu C, Xu H, Veblen DR. 2001. Iron oxide coatings on sand grains from the Atlantic coastal plain: high-resolution transmission electron microscopy. Geology 29:843-846.
    • (2001) Geology , vol.29 , pp. 843-846
    • Penn, R.L.1    Zhu, C.2    Xu, H.3    Veblen, D.R.4
  • 37
    • 0028166469 scopus 로고
    • Comparison between geochemical and biological estimates of subsurface microbial activities
    • Phelps TJ, Murphy EM, Pfiffner SM, White DC. 1994a. Comparison between geochemical and biological estimates of subsurface microbial activities. Microb Ecol 28:335-349.
    • (1994) Microb Ecol , vol.28 , pp. 335-349
    • Phelps, T.J.1    Murphy, E.M.2    Pfiffner, S.M.3    White, D.C.4
  • 38
    • 0028166471 scopus 로고
    • Factors influencing the abundance and metabolic capacities of microorganisms in eastern coastal plain sediments
    • Phelps TJ, Pfiffner SM, Sargent KA, White DC. 1994b. Factors influencing the abundance and metabolic capacities of microorganisms in eastern coastal plain sediments. Microb Ecol 28:351-364.
    • (1994) Microb Ecol , vol.28 , pp. 351-364
    • Phelps, T.J.1    Pfiffner, S.M.2    Sargent, K.A.3    White, D.C.4
  • 40
    • 0030770331 scopus 로고    scopus 로고
    • Biomass, bioactivity, and biodiversity: Microbial ecology of the deep subsurface: Analysis of ester-linked phospholipid fatty acids
    • Ringelberg DB, Sutton S, White DC. 1997. Biomass, bioactivity, and biodiversity: microbial ecology of the deep subsurface: analysis of ester-linked phospholipid fatty acids. FEMS Microbiol Rev 20:371-377.
    • (1997) FEMS Microbiol Rev , vol.20 , pp. 371-377
    • Ringelberg, D.B.1    Sutton, S.2    White, D.C.3
  • 41
    • 0020464815 scopus 로고
    • Kinetics of hydrogen consumption by rumen fluid, anaerobic digestor sludge, and sediment
    • Robinson JA, Tiedje JM. 1982. Kinetics of hydrogen consumption by rumen fluid, anaerobic digestor sludge, and sediment. Appl Environ Microbiol 44:1374-1384.
    • (1982) Appl Environ Microbiol , vol.44 , pp. 1374-1384
    • Robinson, J.A.1    Tiedje, J.M.2
  • 42
    • 0026330502 scopus 로고
    • Hydrogen oxidation activities in sediment as influenced by pH, temperature, moisture, and season
    • Schuler S, Conrad R. 1991. Hydrogen oxidation activities in sediment as influenced by pH, temperature, moisture, and season. Biol Fertil Sediments 12:127-130.
    • (1991) Biol Fertil Sediments , vol.12 , pp. 127-130
    • Schuler, S.1    Conrad, R.2
  • 43
    • 0028935920 scopus 로고
    • Variability and density dependence of bacteria in terrestrial subsurface samples: Implications for enumeration
    • Stevens TO, Holbert, BS. 1995. Variability and density dependence of bacteria in terrestrial subsurface samples: implications for enumeration. J Microbiol Meth 21:283-292.
    • (1995) J Microbiol Meth , vol.21 , pp. 283-292
    • Stevens, T.O.1    Holbert, B.S.2
  • 44
    • 0002828747 scopus 로고
    • Monitoring sulfate-reducing bacteria: Comparison of enumeration media
    • Tanner RS. 1989. Monitoring sulfate-reducing bacteria: comparison of enumeration media. J Microbiol Meth 10:83-90.
    • (1989) J Microbiol Meth , vol.10 , pp. 83-90
    • Tanner, R.S.1
  • 45
    • 0002905846 scopus 로고    scopus 로고
    • Measurement of bacterial growth rates in subsurface sediments using the incorporation of tritiated thymidine into DNA
    • Thorn PM, Ventullo RM. 1998. Measurement of bacterial growth rates in subsurface sediments using the incorporation of tritiated thymidine into DNA. Microb Ecol 16:3-16.
    • (1998) Microb Ecol , vol.16 , pp. 3-16
    • Thorn, P.M.1    Ventullo, R.M.2
  • 46
    • 0032949545 scopus 로고    scopus 로고
    • Iron reduction in the sediments of a hydrocarbon-contaminated aquifer
    • Tuccillo ME, Cozzarelli IM, Herman JS. 1999. Iron reduction in the sediments of a hydrocarbon-contaminated aquifer. App Geochem 14:655-667.
    • (1999) App Geochem , vol.14 , pp. 655-667
    • Tuccillo, M.E.1    Cozzarelli, I.M.2    Herman, J.S.3
  • 47
    • 0031828298 scopus 로고    scopus 로고
    • Sulfur cycling in the terrestrial subsurface: Commensal interactions, spatial scales, and microbial heterogeneity
    • Ulrich GA, Martino D, Burger K, Routh J, Grossman EL, Ammerman JW, Suflita JM. 1998. Sulfur cycling in the terrestrial subsurface: commensal interactions, spatial scales, and microbial heterogeneity. Microb Ecol 36:141-151.
    • (1998) Microb Ecol , vol.36 , pp. 141-151
    • Ulrich, G.A.1    Martino, D.2    Burger, K.3    Routh, J.4    Grossman, E.L.5    Ammerman, J.W.6    Suflita, J.M.7
  • 48
    • 0032142819 scopus 로고    scopus 로고
    • Distribution and diversity of halophilic bacteria in a subsurface salt formation
    • Vreeland RH, Piselli AF, McDonnough S, Meyers SS. 1998. Distribution and diversity of halophilic bacteria in a subsurface salt formation. Extremophiles 2:321-331.
    • (1998) Extremophiles , vol.2 , pp. 321-331
    • Vreeland, R.H.1    Piselli, A.F.2    McDonnough, S.3    Meyers, S.S.4
  • 49
    • 33645384503 scopus 로고
    • Determination of the sedimentary microbial biomass by extractable lipid phosphate
    • White DC, Davis WM, Nickels JS, King JD, Bobbie RJ. 1979. Determination of the sedimentary microbial biomass by extractable lipid phosphate. Oecologia 40:51-62.
    • (1979) Oecologia , vol.40 , pp. 51-62
    • White, D.C.1    Davis, W.M.2    Nickels, J.S.3    King, J.D.4    Bobbie, R.J.5
  • 50
    • 0000111384 scopus 로고
    • Water potential and the respiration of microorganisms in the sediment
    • Wilson JM, Griffin DM. 1975. Water potential and the respiration of microorganisms in the sediment. Sediment Biol Biochem 7:199-204.
    • (1975) Sediment Biol Biochem , vol.7 , pp. 199-204
    • Wilson, J.M.1    Griffin, D.M.2
  • 51
    • 0004252445 scopus 로고    scopus 로고
    • 3rd ed. Upper Saddle River, NJ: Prentice-Hall
    • Zar JH. 1996. Biostatistical Analysis, 3rd ed. Upper Saddle River, NJ: Prentice-Hall.
    • (1996) Biostatistical Analysis
    • Zar, J.H.1


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