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Volumn 85, Issue 3, 2003, Pages 1482-1491

Conformational dynamics of the F1-ATPase β-subunit: A molecular dynamics study

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATE; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE; ADENOSINE DIPHOSPHATE; MAGNESIUM; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATASE;

EID: 0041821614     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(03)74581-0     Document Type: Article
Times cited : (35)

References (47)
  • 3
    • 0001362052 scopus 로고    scopus 로고
    • 1-ATPase: A molecular motor that hydrolyzes ATP with sequential opening and closing of catalytic sites coupled to rotation of its γ-subunit
    • 1-ATPase: A molecular motor that hydrolyzes ATP with sequential opening and closing of catalytic sites coupled to rotation of its γ-subunit. Acc. Chem. Res. 31:819-826.
    • (1998) Acc. Chem. Res. , vol.31 , pp. 819-826
    • Allison, W.S.1
  • 12
    • 33846823909 scopus 로고
    • Particle-Mesh Ewald - An Nlog(N) method for Ewald sums in large systems
    • Darden, T., D. York, and L. Pedersen. 1993. Particle-Mesh Ewald - an Nlog(N) method for Ewald sums in large systems. J. Chem. Phys. 98: 10089-10092.
    • (1993) J. Chem. Phys. , vol.98 , pp. 10089-10092
    • Darden, T.1    York, D.2    Pedersen, L.3
  • 14
    • 0030863908 scopus 로고    scopus 로고
    • ATP synthase: A tentative structural model
    • Engelbrecht, S., and W. Junge. 1997. ATP synthase: a tentative structural model. FEBS Lett. 414:485-491.
    • (1997) FEBS Lett. , vol.414 , pp. 485-491
    • Engelbrecht, S.1    Junge, W.2
  • 15
    • 0030729838 scopus 로고    scopus 로고
    • An extensively modified version of MOLSCRIPT that includes greatly enhanced coloring capabilities
    • Esnouf, R. M. 1997. An extensively modified version of MOLSCRIPT that includes greatly enhanced coloring capabilities. J. Mol. Graph. Model. 15:132-134.
    • (1997) J. Mol. Graph. Model. , vol.15 , pp. 132-134
    • Esnouf, R.M.1
  • 17
    • 0035846822 scopus 로고    scopus 로고
    • 1-ATPase at 3.2 Å resolution
    • 1-ATPase at 3.2 Å resolution. J. Biol. Chem. 276:1345-1352.
    • (2001) J. Biol. Chem. , vol.276 , pp. 1345-1352
    • Groth, G.1    Pohl, E.2
  • 18
    • 0017807719 scopus 로고
    • Subunit interaction during catalysis - Implications of concentration dependency of oxygen exchanges accompanying oxidative-phosphorylation for alternating site cooperativity
    • Hackney, D. D., and P. D. Boyer. 1978. Subunit interaction during catalysis - implications of concentration dependency of oxygen exchanges accompanying oxidative-phosphorylation for alternating site cooperativity. J. Biol. Chem. 253:3164-3170.
    • (1978) J. Biol. Chem. , vol.253 , pp. 3164-3170
    • Hackney, D.D.1    Boyer, P.D.2
  • 19
    • 0032006209 scopus 로고    scopus 로고
    • Systematic analysis of domain motions in proteins from conformational change: New results on citrate synthase and T4 lysozyme
    • Hayward, S., and H. J. C. Berendsen. 1998. Systematic analysis of domain motions in proteins from conformational change: new results on citrate synthase and T4 lysozyme. Proteins. 30:144-154.
    • (1998) Proteins , vol.30 , pp. 144-154
    • Hayward, S.1    Berendsen, H.J.C.2
  • 20
    • 0036888353 scopus 로고    scopus 로고
    • Improvements in the analysis of domain motions in proteins from conformational change: DynDom version 1.50
    • Hayward, S., and R. A. Lee. 2002. Improvements in the analysis of domain motions in proteins from conformational change: DynDom version 1.50. J. Mol. Graph. 21:181-183.
    • (2002) J. Mol. Graph. , vol.21 , pp. 181-183
    • Hayward, S.1    Lee, R.A.2
  • 21
    • 0000388705 scopus 로고    scopus 로고
    • LINCS: A linear constraint solver for molecular simulations
    • Hess, B., H. Bekker, H. J. C. Berendsen, and J. G. E. M. Fraaije. 1997. LINCS: a linear constraint solver for molecular simulations. J. Comp. Chem. 18:1463-1472.
    • (1997) J. Comp. Chem. , vol.18 , pp. 1463-1472
    • Hess, B.1    Bekker, H.2    Berendsen, H.J.C.3    Fraaije, J.G.E.M.4
  • 22
    • 0030715561 scopus 로고    scopus 로고
    • ATP synthase: An electrochemical transducer with rotatory mechanics
    • Junge, W., H. Lill, and S. Engelbrecht. 1997. ATP synthase: an electrochemical transducer with rotatory mechanics. TIBS. 22:420-423.
    • (1997) TIBS , vol.22 , pp. 420-423
    • Junge, W.1    Lill, H.2    Engelbrecht, S.3
  • 23
    • 0029881007 scopus 로고    scopus 로고
    • MOLMOL: A program for display and analysis of macromolecular structures
    • Koradi, R., M. Billeter, and K. Wüthrich. 1996. MOLMOL: a program for display and analysis of macromolecular structures. J. Mol. Graph. 14:51-55
    • (1996) J. Mol. Graph. , vol.14 , pp. 51-55
    • Koradi, R.1    Billeter, M.2    Wüthrich, K.3
  • 24
    • 0035789518 scopus 로고    scopus 로고
    • GROMACS 3.0: A package for molecular simulation and trajectory analysis
    • Lindahl, E., B. Hess, and D. van der Spoel. 2001. GROMACS 3.0: a package for molecular simulation and trajectory analysis. J. Mol. Model. 7:306-317.
    • (2001) J. Mol. Model. , vol.7 , pp. 306-317
    • Lindahl, E.1    Hess, B.2    Van der Spoel, D.3
  • 28
    • 0035838982 scopus 로고    scopus 로고
    • 1-ATPase with nucleotide bound to all three catalytic sites: Implications for the mechanism of rotary catalysis
    • 1-ATPase with nucleotide bound to all three catalytic sites: implications for the mechanism of rotary catalysis. Cell. 106:331-341.
    • (2001) Cell , vol.106 , pp. 331-341
    • Menz, R.I.1    Walker, J.E.2    Leslie, A.G.W.3
  • 29
    • 0030815133 scopus 로고    scopus 로고
    • RASTER 3D: Photorealistic molecular graphics
    • Merritt, E. A., and D. J. Bacon. 1997. RASTER 3D: photorealistic molecular graphics. Methods Enzymol. 277:505-524.
    • (1997) Methods Enzymol. , vol.277 , pp. 505-524
    • Merritt, E.A.1    Bacon, D.J.2
  • 31
    • 84986440341 scopus 로고
    • SETTLE - An analytical version of the SHAKE and RATTLE algorithm for rigid water models
    • Miyamoto, S., and P. A. Kollman. 1992. SETTLE - an analytical version of the SHAKE and RATTLE algorithm for rigid water models. J. Comp. Chem. 13:952-962.
    • (1992) J. Comp. Chem. , vol.13 , pp. 952-962
    • Miyamoto, S.1    Kollman, P.A.2
  • 33
    • 0032527132 scopus 로고    scopus 로고
    • 1-ATPase covalently inhibited with 4-chloro-7-nitrobenzofurazan: The structure provides further support for a rotary catalytic mechanism
    • 1-ATPase covalently inhibited with 4-chloro-7-nitrobenzofurazan: the structure provides further support for a rotary catalytic mechanism. Structure. 6:831-837.
    • (1998) Structure , vol.6 , pp. 831-837
    • Orriss, G.1    Leslie, A.2    Braig, K.3    Walker, J.4
  • 36
    • 0029893335 scopus 로고    scopus 로고
    • Intersubunit rotation in active F-ATPase
    • Sabbert, D., S. Engelbrecht, and W. Junge. 1996. Intersubunit rotation in active F-ATPase. Nature. 381:623-625.
    • (1996) Nature , vol.381 , pp. 623-625
    • Sabbert, D.1    Engelbrecht, S.2    Junge, W.3
  • 41
    • 0033607504 scopus 로고    scopus 로고
    • Molecular architecture of the rotary motor in ATP synthase
    • Stock, D., A. G. W. Leslie, and J. E. Walker. 1999. Molecular architecture of the rotary motor in ATP synthase. Science. 286:1700-1705.
    • (1999) Science , vol.286 , pp. 1700-1705
    • Stock, D.1    Leslie, A.G.W.2    Walker, J.E.3
  • 43
    • 0032547899 scopus 로고    scopus 로고
    • 1 motor of ATP synthase
    • 1 motor of ATP synthase. Nature, 396:279-282.
    • (1998) Nature , vol.396 , pp. 279-282
    • Wang, H.1    Oster, G.2
  • 44
    • 0027317040 scopus 로고
    • 1-ATPase provides a direct probe of nucleotide-binding - Maximal ATP hydrolysis occurs with three sites occupied
    • 1-ATPase provides a direct probe of nucleotide-binding - maximal ATP hydrolysis occurs with three sites occupied. J. Biol. Chem. 268:20126-20133.
    • (1993) J. Biol. Chem. , vol.268 , pp. 20126-20133
    • Weber, J.1    Wilke-Mounts, S.2    Lee, R.S.F.3    Grell, E.4    Senior, A.E.5
  • 45
    • 0032568695 scopus 로고    scopus 로고
    • 1-ATPase is a highly efficient molecular motor that rotates with discrete 120° steps
    • 1-ATPase is a highly efficient molecular motor that rotates with discrete 120° steps. Cell. 93:1117-1124.
    • (1998) Cell , vol.93 , pp. 1117-1124
    • Yasuda, R.1    Noji, H.2    Kinosita, K.3    Yoshida, M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.