Helical structure of dermaseptin B2 in a membrane-mimetic environment

Biochemistry

Volumn 42, Issue 34, 2003, Pages 10311-10323

  Lequin, Olivier ^a   Bruston, Francine ^b   Convert, Odile ^a   Chassaing, Gérard ^a   Nicolas, Pierre ^b  

^a SORBONNE UNIVERSITÉ   (France)

^b INSTITUT JACQUES MONOD   (France)

Author keywords

[No Author keywords available]

Indexed keywords

MICELLES; MICROORGANISMS; MOLECULAR STRUCTURE; OLIGOMERS; POLYPEPTIDES; SOLUTIONS;

EXCHANGE EQUILIBRIUM;

SKIN;

DERMASEPTIN; DERMASEPTIN B2; GLYCINE; OLIGOMER; TRYPTOPHAN; UNCLASSIFIED DRUG; VALINE;

AMINO TERMINAL SEQUENCE; ANTIBACTERIAL ACTIVITY; AQUEOUS SOLUTION; ARTICLE; BACILLUS MEGATERIUM; CONFORMATIONAL TRANSITION; CONTROLLED STUDY; ENTEROBACTER CLOACAE; MICELLE; MINIMUM INHIBITORY CONCENTRATION; NONHUMAN; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; PROTEIN SECONDARY STRUCTURE; SALMONELLA TYPHIMURIUM; STAPHYLOCOCCUS AUREUS; STRUCTURE ACTIVITY RELATION; STRUCTURE ANALYSIS;

AMINO ACID SEQUENCE; AMPHIBIAN PROTEINS; ANTI-BACTERIAL AGENTS; ANTIMICROBIAL CATIONIC PEPTIDES; BACILLUS MEGATERIUM; BIOMIMETIC MATERIALS; GRAM-NEGATIVE BACTERIA; MEMBRANES, ARTIFICIAL; MICELLES; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; POLYTETRAFLUOROETHYLENE; PROTEIN STRUCTURE, SECONDARY; SODIUM DODECYL SULFATE; SPECTRUM ANALYSIS; STAPHYLOCOCCUS AUREUS; WATER;

ANURA; BACILLUS MEGATERIUM; ENTEROBACTER; ENTEROBACTER CLOACAE; NEGIBACTERIA; POSIBACTERIA; SALMONELLA TYPHIMURIUM; STAPHYLOCOCCUS; STAPHYLOCOCCUS AUREUS;

EID: 0041322755     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi034401d     Document Type: Article

References (54)

1. Simmaco, M., Mignogna, G., and Barra, D. (1998) Biopolymers 47, 435-450.
2. Shai, Y. (1999) Biochim. Biophys. Acta 1462, 55-70.
3. Sonnichsen, F. D., Van Eyk, J. E., Hodges, R. S., and Sykes, B. D. (1992) Biochemistry 31, 8790-8798.
4. Oren, Z., and Shai, Y. (2000) Biochemistry 39, 6103-6114.
5. Boncheva, M., and Vogel, H. (1997) Biophys. J. 73, 1056-1072.
6. Tatulian, S. A., Jones, L. R., Reddy, L. G., Stokes, D. L., and Tamm, L. K. (1995) Biochemistry 34, 4448-4456.
7. Ludtke, S. J., He, K., Heller, W. T., Harroun, T. A., Yang, L., and Huang, H. W. (1996) Biochemistry 35, 13723-13728.
8. Williams, R. W., Starman, R., Taylor, K. M., Gable, K., Beeler, T., Zasloff, M., and Covell, D. (1990) Biochemistry 29, 4490-4496.
9. Park, S., Park, S. H., Ahn, H. C., Kim, S., Kim, S. S., and Lee, B. J. (2001) FEBS Lett. 507, 95-100.
10. Fleury, Y., Dayem, M. A., Montagne, J. J., Chaboisseau, E., Le Caer, J. P., Nicolas, P., and Delfour, A. (1996) J. Biol. Chem. 271, 14421-14429.
11. Brand, G. D., Leite, J. R., Silva, L. P., Albuquerque, S., Prates, M. V., Azevedo, R. B., Carregaro, V., Da Silva, J. S., Sa, V. C., Brandao, R. A., and Bloch, C., Jr. (2002) J. Biol. Chem. 277, 49332-49340.
12. Charpentier, S., Amiche, M., Mester, J., Vouille, V., Le Caer, J. P., Nicolas,P., and Delfour, A. (1998)J. Biol. Chem. 273, 14690-14697.
13. Strahilevitz, J., Mor, A., Nicolas, P., and Shai, Y. (1994) Biochemistry 33, 10951-10960.
14. Nicolas, P., and Mor, A. (1995) Annu. Rev. Microbiol. 49, 277-304.
15. Daly, J. W., Caceres, J., Moni, R. W., Gusovsky, F., Moos, M., Jr., Seamon, K. B., Milton, K., and Myers, C. W. (1992) Proc. Natl. Acad. Sci. U.S.A. 89, 10960-10963.
16. Mor, A., Hani, K., and Nicolas, P. (1994) J. Biol. Chem. 269, 31635-31641.
17. Hernandez, C., Mor, A., Dagger, F., Nicolas, P., Hernandez, A., Benedetti, E. L., and Dunia, I. (1992) Eur. J. Cell Biol. 59, 414-424.
18. Mor, A., Nguyen, V. H., Delfour, A., Migliore-Samour, D., and Nicolas, P. (1991) Biochemistry 30, 8824-8830.
19. Shalev, D. E., Mor, A., and Kustanovich, I. (2002) Biochemistry 41, 7312-7317.
20. Kustanovich, I., Shalev, D. E., Mikhlin, M., Gaidukov, L., and Mor, A. (2002) J. Biol. Chem. 277, 16941-16951.
21. Feder, R., Dagan, A., and Mor, A. (2000) J. Biol. Chem. 275, 4230-4328.
22. Mor, A., Amiche, M., and Nicolas, P. (1994) Biochemistry 33, 6642-6650.
23. Chen, Y. H., Lo, T. B., and Yang, J. T. (1977) Biochemistry 16, 1826-1830.
24. Zhong, L., and Johnson, W. C., Jr. (1992) Proc. Natl. Acad. Sci. U.S.A. 89, 4462-4465.
25. Surewicz, W. K., Mantsch, H. H., and Chapman, D. (1993) Biochemistry 32, 389-394.
26. Piotto, M., Saudek, V., and Sklenar, V. (1992) J. Biomol. NMR 2, 661-665.
27. Bax, A., and Davis, D. G. (1985) J. Magn. Reson. 65, 355-360.
28. Kumar, A., Ernst, R. R., and Wüthrich, K. (1980) Biochem. Biophys. Res. Commun. 95, 1-6.
29. Marion, D., and Wüthrich, K. (1983) Biochem. Biophys. Res. Commun. 113, 967-974.
30. Schleucher, J., Schwendinger, M., Sattler, M., Schmidt, P., Schedletzky, O., Glaser, S. J., Sorensen, O. W., and Griesinger, C. (1994) J. Biomol. NMR 4, 301-306.
31. Wishart, D. S., Bigam, C. G., Holm, A., Hodges, R. S., and Sykes, B. D. (1995) J. Biomol. NMR 5, 67-81.
32. Wüthrich, K., Billeter, M., and Braun, W. (1983) J. Mol. Biol. 169, 949-961.
33. Weiner, S. J., Kollmann, P. A., Nguyen, D. T., and Case, D. A. (1986) J. Comput. Chem. 7, 230-252.
34. Nilges, M., Clore, G. M., and Gronenbom, A. M. (1988) FEBS Lett. 229, 317-324.
35. Casteels, P., Ampe, C., Jacobs, F., and Tempst, P. (1993) J. Biol. Chem. 268, 7044-7054.
36. Mysels (1959) Introduction to colloid chemistry, Interscience, New York.
37. Bruch, M. D., Dhingra, M. M., and Gierasch, L. M. (1991) Proteins 10, 130-139.
38. Goormaghtigh, E., Cabiaux, V., and Ruysschaert, J. (1994) Subcellular biochemistry: physicochemical methods in the study of biomembranes, Vol. 23, Plenum Press, New York.
39. De Lozé, C., Baron, M.-H., and Fillaux, F. (1978) J. Chim. Phys. 75, 631-649.
40. Wantyghem, J., Baron, M.-H., Picquart, M., and Lavialle, F. (1990) Biochemistry 29, 6600-6609.
41. De Kroon, A. I., Soekarjo, M. W., De Gier, J., and De Kruijff, B. (1990) Biochemistry 29, 8229-8240.
42. Li, S. C., and Deber, C. M. (1994) Nat. Struct. Biol. 1, 558.
43. Wishart, D. S., Sykes, B. D., and Richards, F. M. (1991) J. Mol. Biol. 222, 311-333.
44. Wishart, D. S., and Sykes, B. D. (1994) Methods Enzymol. 239, 363-392.
45. Wüthrich, K. (1986) NMR of proteins and nucleic acids, Wiley, New York.
46. Damberg, P., Jarvet, J., and Gräslund, A. (2001) Methods Enzymol. 339, 271-285.
47. Blondelle, S. E., Lohner, K., and Aguilar, M. (1999) Biochim. Biophys. Acta 1462, 89-108.
48. Montserret, R., McLeish, M. J., Bockmann, A., Geourjon, C., and Penin, F. (2000) Biochemistry 39, 8362-8373.
49. Lindberg, M., Jarvet, J., Langel, U., and Graslund, A. (2001) Biochemistry 40, 3141-3149.
50. Zhou, N. E., Zhu, B. Y., Sykes, B. D., and Hodges, R. S. (1992) J. Am. Chem. Soc. 114, 4320-4326.
51. Daggett, V., Kollman, P. A., and Kuntz, I. D. (1991) Biopolymers 31, 1115-1134.
52. Bechinger, B. (1999) Biochim. Biophys. Acta 1462, 157-183.
53. Gesell, J., Zasloff, M., and Opella, S. J. (1997) J. Biomol. NMR 9, 127-135.
54. Segrest, J. P., De Loof, H., Dohlman, J. G., Brouillette, C. G., and Anantharamaiah, G. M. (1990) Proteins 8, 103-117.