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Volumn 719, Issue , 1999, Pages 239-254

The basic shape topology of protein interfaces

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EID: 0040790519     PISSN: 00976156     EISSN: None     Source Type: Book Series    
DOI: 10.1021/bk-1999-0719.ch016     Document Type: Article
Times cited : (3)

References (37)
  • 1
    • 12044255753 scopus 로고
    • Scales of solute hydrogen bonding - Their construction and application to physicochemical and biochemical processes
    • Abraham, W. H. "Scales of Solute Hydrogen Bonding - Their Construction and Application to Physicochemical and Biochemical Processes". Chem. Soc. Rev 1993, 22, 73-83.
    • (1993) Chem. Soc. Rev , vol.22 , pp. 73-83
    • Abraham, W.H.1
  • 2
    • 19444386240 scopus 로고
    • Applications of solvation equations to chemical and biochemical processes
    • Abraham, W. H. "Applications of Solvation Equations to Chemical and Biochemical Processes". Pure and Appl. Chem. 1993, 65, (12), 2503-2512.
    • (1993) Pure and Appl. Chem. , vol.65 , Issue.12 , pp. 2503-2512
    • Abraham, W.H.1
  • 3
    • 0016708122 scopus 로고
    • Principles of protein-protein recognition
    • Chothia, C.; Janin, J. "Principles of Protein-Protein Recognition". Nature 1975, 256, 705-708.
    • (1975) Nature , vol.256 , pp. 705-708
    • Chothia, C.1    Janin, J.2
  • 4
    • 0025123333 scopus 로고
    • The structure of protein-protein recognition sites
    • Janin, J.; Chothia, C. "The Structure of Protein-Protein Recognition Sites". J. Biol. Chem. 1990, 256, (7), 16027-16030.
    • (1990) J. Biol. Chem. , vol.256 , Issue.7 , pp. 16027-16030
    • Janin, J.1    Chothia, C.2
  • 6
    • 0040430384 scopus 로고    scopus 로고
    • QSD quadratic shape descriptors .1. Rapid superposition of dissimilar molecules using geometrically invariant surface descriptors
    • submitted
    • Goldman, B. B.; Wipke, W. T. "QSD Quadratic Shape Descriptors .1. Rapid Superposition of Dissimilar Molecules Using Geometrically Invariant Surface Descriptors". J. Chem. Inf. Comput. Sci. 1998, submitted.
    • (1998) J. Chem. Inf. Comput. Sci.
    • Goldman, B.B.1    Wipke, W.T.2
  • 7
    • 0002233999 scopus 로고
    • A simple method for the representation, quantification, and comparison of the volumes and shapes of chemical compounds
    • Stouch, T. R.; Jurs, P. "A Simple Method for the Representation, Quantification, and Comparison of the Volumes and Shapes of Chemical Compounds". J. Chem. Inf. Comput. Sci. 1986, 4-12.
    • (1986) J. Chem. Inf. Comput. Sci. , pp. 4-12
    • Stouch, T.R.1    Jurs, P.2
  • 8
    • 0022744127 scopus 로고
    • 1 subunit interface
    • 1 Subunit Interface". Biopolymers 1986, 25, 1229-1247.
    • (1986) Biopolymers , vol.25 , pp. 1229-1247
    • Connolly, M.L.1
  • 9
    • 84988104006 scopus 로고
    • The shape of molecular charge distributions: Group theory without symmetry
    • Mezey P. G. "The Shape of Molecular Charge Distributions: Group Theory without Symmetry". J. Comp Chem. 1986, 8, (4), 462-469.
    • (1986) J. Comp Chem. , vol.8 , Issue.4 , pp. 462-469
    • Mezey, P.G.1
  • 10
    • 0024028105 scopus 로고
    • Description of molecular surface shape using fourier descriptors
    • Leicester, S. E.; Finney, J. L.; Bywater, R. "Description of Molecular Surface Shape Using Fourier Descriptors". J. Mol. Graphics 1988, 6, 104-108.
    • (1988) J. Mol. Graphics , vol.6 , pp. 104-108
    • Leicester, S.E.1    Finney, J.L.2    Bywater, R.3
  • 11
  • 12
    • 0026924836 scopus 로고
    • Shape distributions of protein topography
    • Connolly, M. L. "Shape Distributions of Protein Topography". Biopolymers 1992, 32, 1215-1236.
    • (1992) Biopolymers , vol.32 , pp. 1215-1236
    • Connolly, M.L.1
  • 14
    • 0027551946 scopus 로고
    • Approximation and characterization of molecular surfaces
    • Duncan, B. S.; Olson, A. J. "Approximation and Characterization of Molecular Surfaces". Biopolymers 1993, 33, 219-229.
    • (1993) Biopolymers , vol.33 , pp. 219-229
    • Duncan, B.S.1    Olson, A.J.2
  • 15
    • 0000747830 scopus 로고
    • A gaussian description of molecular shape
    • Grant, J. A.; Pickup, B. T. "A Gaussian Description of Molecular Shape". J. Phys. Chem 1995, 99, 3503-3510.
    • (1995) J. Phys. Chem , vol.99 , pp. 3503-3510
    • Grant, J.A.1    Pickup, B.T.2
  • 16
    • 0030075934 scopus 로고    scopus 로고
    • Similarity and complementarity of molecular shapes: Applicibility of a topological analysis approach
    • Leherte, L.; Latour, T.; Vercauteren, D. P. "Similarity and Complementarity of Molecular Shapes: Applicibility of a Topological Analysis Approach". J. ComputAided Mol. Design 1996, 10, 55-66.
    • (1996) J. Computaided Mol. Design , vol.10 , pp. 55-66
    • Leherte, L.1    Latour, T.2    Vercauteren, D.P.3
  • 17
    • 0022557691 scopus 로고
    • Invariant surface characteristics for 3D object recognition in range images
    • Besl, P. J.; Jain, R. C. "Invariant Surface Characteristics for 3D Object Recognition in Range Images". Computer Vision Graphics and Processing 1986, 33, 33-80.
    • (1986) Computer Vision Graphics and Processing , vol.33 , pp. 33-80
    • Besl, P.J.1    Jain, R.C.2
  • 18
    • 0023978579 scopus 로고
    • Segmentation through variable-order surface fitting
    • Besl, P. J.; Jain, R. C. "Segmentation Through Variable-Order Surface Fitting". IEEE trans. Pattern Anal. Machine Intell. 1988, 10, (2), 167-198.
    • (1988) IEEE Trans. Pattern Anal. Machine Intell. , vol.10 , Issue.2 , pp. 167-198
    • Besl, P.J.1    Jain, R.C.2
  • 20
    • 0023198896 scopus 로고
    • Crystal and molecular structures of the complex of α-chymotrypsin with its inhibitor Turkey ovomucoid third domain at 1.8 Å resolution
    • Fujinaga, A.; Sielecki, R.; Read, R. J.; Ardlett, W. "Crystal and Molecular Structures of the Complex of α-Chymotrypsin with its Inhibitor Turkey Ovomucoid Third Domain at 1.8 Å Resolution". J. Mol. Biol. 1987, 195, 397-418.
    • (1987) J. Mol. Biol. , vol.195 , pp. 397-418
    • Fujinaga, A.1    Sielecki, R.2    Read, R.J.3    Ardlett, W.4
  • 21
    • 84977303841 scopus 로고
    • The geometry of the reactive site and of the peptide groups in trypsin, trypsinogen and its complexes with inhibitors
    • Marquart, M.; Walter, J.; Deisenhofer, J.; Bode, W.; Huber, R. "The Geometry of the Reactive Site and of the Peptide Groups in Trypsin, Trypsinogen and Its Complexes with Inhibitors". Acta Cryst. 1983, B39, 480-490.
    • (1983) Acta Cryst. , vol.B39 , pp. 480-490
    • Marquart, M.1    Walter, J.2    Deisenhofer, J.3    Bode, W.4    Huber, R.5
  • 22
    • 0023729499 scopus 로고
    • Structural comparison of two serine proteinase-protein inhibitor complexes: Eglin-C-subtilisn Carlsberg and CI-2-subtilisn novo
    • McPhalen, C. A.; James, M. N. G. "Structural Comparison of Two Serine Proteinase-Protein Inhibitor Complexes: Eglin-C-Subtilisn Carlsberg and CI-2-Subtilisn Novo". Biochemistry 1988, 27, 6582-6598.
    • (1988) Biochemistry , vol.27 , pp. 6582-6598
    • McPhalen, C.A.1    James, M.N.G.2
  • 23
    • 0026543155 scopus 로고
    • Crystal structure of the cell binding β-oligomer of verotoxin-1 from E-coli"
    • Stein, P. E.; Boodhoo, A.; Tyrell, G. J.; Brunton, J. L.; Read, R. J. "Crystal Structure of the Cell Binding β-Oligomer of Verotoxin-1 from E-coli". Nature 1992, 355, (6362), 748-750.
    • (1992) Nature , vol.355 , Issue.6362 , pp. 748-750
    • Stein, P.E.1    Boodhoo, A.2    Tyrell, G.J.3    Brunton, J.L.4    Read, R.J.5
  • 24
    • 0027787871 scopus 로고
    • The crystal structure of lysin, a fertilization protein
    • Shaw, A.; Mcree, D. E.; Vacquier, V. D.; Stout, C. D. "The Crystal Structure of Lysin, A Fertilization Protein". Science 1993, 262, (5141), 1864-1867.
    • (1993) Science , vol.262 , Issue.5141 , pp. 1864-1867
    • Shaw, A.1    Mcree, D.E.2    Vacquier, V.D.3    Stout, C.D.4
  • 25
    • 0017824077 scopus 로고
    • Structure of prealbumin: Secondary, tertiary and quaternary interactions determined by fourier refinement at 1.8 Å
    • Blake, C. C. F.; Geisow, M. J.; Oately, S. J.; Rérat, B.; Rérat, C. "Structure of Prealbumin: Secondary, Tertiary and Quaternary Interactions Determined by Fourier Refinement at 1.8 Å". J. Mol. Biol. 1978, 121, 339-356.
    • (1978) J. Mol. Biol. , vol.121 , pp. 339-356
    • Blake, C.C.F.1    Geisow, M.J.2    Oately, S.J.3    Rérat, B.4    Rérat, C.5
  • 27
    • 0025914242 scopus 로고
    • Crystal structure of a CAP-DNA complex -the DNA is bent by 90-degrees
    • Schultz, S. A.; Steitz, G. C. S. T. A. "Crystal Structure of a CAP-DNA Complex -The DNA is Bent by 90-Degrees". Science 1991, 253, 1001-1007.
    • (1991) Science , vol.253 , pp. 1001-1007
    • Schultz, S.A.1    Steitz, G.C.S.T.A.2
  • 28
    • 0028389672 scopus 로고
    • Structures of larger proteins, protein-ligand and protein-DNA complexes by multidimensional heteronuclear NMR
    • Clore, G. M.; Gronenborn, A. M. "Structures of Larger Proteins, Protein-Ligand and Protein-DNA Complexes by Multidimensional Heteronuclear NMR". Protein Science 1994, 3, 372-390.
    • (1994) Protein Science , vol.3 , pp. 372-390
    • Clore, G.M.1    Gronenborn, A.M.2
  • 29
    • 0027983669 scopus 로고
    • Crystal structure of a P53 tumor supressor DNA complex -understanding tumorigenic mutations
    • Cho, Y. J.; Gorina, S.; Jeffery, P. D.; Pavletich, N. P. "Crystal Structure of a P53 Tumor Supressor DNA Complex -Understanding Tumorigenic Mutations". Science 1994, 265, (5170), 346-355.
    • (1994) Science , vol.265 , Issue.5170 , pp. 346-355
    • Cho, Y.J.1    Gorina, S.2    Jeffery, P.D.3    Pavletich, N.P.4
  • 32
    • 0021107965 scopus 로고
    • Solvent accessible surfaces of proteins and nucleic acids
    • Connolly, M. L. "Solvent Accessible Surfaces of Proteins and Nucleic Acids". Science 1983, 221, 709-713.
    • (1983) Science , vol.221 , pp. 709-713
    • Connolly, M.L.1
  • 33
    • 0000538815 scopus 로고
    • Analytical molecular surface calculation
    • Connolly, M. L. "Analytical Molecular Surface Calculation". J. Appl. Cryst. 1983, 16, 548-558.
    • (1983) J. Appl. Cryst. , vol.16 , pp. 548-558
    • Connolly, M.L.1
  • 34
    • 0003431470 scopus 로고
    • Wadsworth and Brooks/Cole: Pacific Grove, California
    • Rawlings, J. O., Applied Regression Analysis, Wadsworth and Brooks/Cole: Pacific Grove, California, 1988.
    • (1988) Applied Regression Analysis
    • Rawlings, J.O.1
  • 35
  • 37
    • 0027772959 scopus 로고
    • Shape complementarity at protein-protein interfaces
    • Lawrence, M. C.; Colman, P. M. "Shape Complementarity at Protein-Protein Interfaces". J. Mol. Biol. 1993, 234, (4), 946-950.
    • (1993) J. Mol. Biol. , vol.234 , Issue.4 , pp. 946-950
    • Lawrence, M.C.1    Colman, P.M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.