Phylogenetic relationships of peccaries based on mitochondrial cytochrome B DNA sequences

Journal of Mammalogy

Volumn 79, Issue 2, 1998, Pages 566-572

  Theimer, Tad C ^a   Keim, Paul ^a  

^a NORTHERN ARIZONA UNIVERSITY   (United States)

Author keywords

Catagonus; Cytochrome b; Dicotyles; Mitochondrial DNA; Pecari; Suidae; Tayassu; Tayassuidae

Indexed keywords

BABYROUSA BABYRUSSA; CATAGONUS; CATAGONUS WAGNERI; PECARI; PECARI TAJACU; PHACOCHOERUS AETHIOPICUS; PHACOCHOERUS AFRICANUS; SUIDAE; SUS; SUS SCROFA; SUS SCROFA DOMESTICA; TAYASSU; TAYASSU PECARI; TAYASSUIDAE;

EID: 0040103042     PISSN: 00222372     EISSN: None     Source Type: Journal    
DOI: 10.2307/1382987     Document Type: Article

References (39)

1. ANDERSON, S., ET AL. 1981. Sequence and organization of the human mitochondrial genome. Nature, 290: 457-465.
2. AVISE, J. C., ET AL. 1987. Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics. Annual Review of Ecology and Systematics, 18:489-522.
3. BAKER, R. J., V. A. TADDEI, J. L. HUDGEONS, AND R. A. VAN DEN BUSSCHE. 1994. Systematic relationships within Chiroderma (Chiroptera: Phyllostomatidae) based on cytochrome b sequence variation. Journal of Mammalogy, 75:321-327.
4. BENIRSCHKE, K., A. T. KUMAMOTO, AND D. A. MERITT. 1985. Chromosomes of the Chacoan peccary, Catagonus wagneri. Journal of Heredity, 76:95-98.
5. CARR, S. M., AND G. A. HUGHES. 1993. Direction of introgressive hybridization between species of North American deer (Odocoileus) as inferred from mitochondrial cytochrome-b sequences. Journal of Mammalogy, 74:331-342.
6. DUCROCQ, S. 1994. An Eocene peccary from Thailand and the biogeographical origins of the artiodactyl family Tayassuidae. Paleontology, 37:765-779.
7. FELSENSTEIN, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39: 783-791.
8. _. 1995. PHYLIP (Phylogeny Inference Package). Version 3.57c. University of Washington, Seattle. (on disk).
9. FERRIS, S. D., R. D. SAGE, C.-H. HUANG, J. T. NIELSEN, U. RITTE, AND A. C. WILSON. 1983. Flow of mitochondrial DNA across a species boundary. Proceedings of the National Academy of Sciences, USA, 80: 2290-2294.
10. GINSBURG, L. 1973. Les tayassuidae des Phosphorites du Quercy. Palaeovertebrata, 6:55-85.
11. GRUBB, P. 1993. Order Artiodactyla. Pp. 377-414, in Mammal species of the world: a taxonomic and geographic reference (D. E. Wilson and D. M. Reeder, eds.). Smithsonian Institution Press, Washington, D.C., 1206 pp.
12. HENDEY, Q. B. 1976. Fossil peccary from the Pliocene of South Africa. Science, 192:787-789.
13. HILLIS, D. M., AND J. P. HUELSENBECK. 1992. Signal, noise and reliability in molecular phylogenetic analyses. Heredity, 83:189-195.
14. INTELLIGENETICS, INC. 1991. PC/GENE program, release 6.6. IntelliGenetics, Inc., Mountain View, California. (on disk).
15. IRWIN, D. M., T. D. KOCHER, AND A. C. WILSON. 1991. Evolution of the cytochrome b gene in mammals. Journal of Molecular Evolution, 32:128-144.
16. KILTIE, R. A. 1985. Craniomandibular differences between rain-forest and desert collared peccaries. The American Midland Naturalist, 113:384-387.
17. KIMURA, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16:111-120.
18. KOCHER, T. D., ET AL. 1989. Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proceedings of the National Academy of Sciences, USA, 86:6196-6200.
19. MANIATIS, T., E. F. FRITSCH, AND J. SAMBROOK. 1982. Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 545 pp.
20. MARSHALL, L. G., ET AL. 1984. Mammals and stratigraphy: geochronology of the continental mammal-bearing Quaternary of South America. Palaeovertebrata Memoire Extraordinaire, 1984:1-76.
21. MILLER, G. S., JR. 1912. List of North American land mammals in the United States National Museum, 1911. Bulletin of the United States National Museum, 79:1-455.
22. MIYAMOTO, M. M., F. KRAUS, P. J. LAIPIS, S. M. TANHAUSER, AND S. D. WEBB. 1993. Mitochondrial DNA phytogenies within Artiodactyla. Pp. 268-281, in Mammal phylogeny: placentals. (F. S. Szalay, M. J. Novacek, and M. C. McKenna, eds.). Springer-Verlag, Inc., New York, 321pp.
23. MOUCHATY, S., J. A. COOK, AND G. F. SHIELDS. 1995. Phylogenetic analysis of northern hair seals based on nucleotide sequences of the mitochondrial cytochrome b gene. Journal of Mammalogy, 76:1178-1185.
24. NEI, M. 1987. Molecular evolutionary genetics. Columbia University Press, New York, 512 pp.
25. PALUMBI, S., ET AL. 1991. The simple fool's guide to PCR. Version 2.0. University of Hawaii, Honolulu, 43 pp.
26. PAMILO, P., AND M. NEI. 1988. Relationships between gene trees and species trees. Molecular Biology and Evolution, 5:568-583.
27. PATTON, J. L., AND M. F. SMITH. 1992. mtDNA phylogeny of Andean mice: a test of diversification r across ecological gradients. Evolution, 46:174-183.
28. SANGER, F. 1981. Determination of nucleotide sequence in DNA. Science, 214:1205.
29. SHIELDS, G. F., AND A. C. WILSON. 1987. Calibration of mitochondrial DNA evolution in geese. Journal of Molecular Evolution, 24:212-217.
30. SMITH, M. F., AND J. L. PATTON. 1991. Variation in the mitochondrial cytochrome b sequence in natural populations of South American akodontine rodents (Muridae: Sigmodontinae). Molecular Biology and Evolution, 8:85-103.
31. SOWLS, L. K. 1984. The peccaries. University of Arizona Press, Tucson, 251 pp.
32. SWOFFORD, D. 1991. PAUP: phylogenetic analysis using parsimony. Version 3.0. Illinois Natural History Survey, Champaign, Illinois. (on disk).
33. TODD, N. B. 1985. Significance of a diploid number of 20 in the peccary Catagonus wagneri. Journal of Heredity, 76:310.
34. WETZEL, R. M. 1977a. The chacoan peccary Catagonus wagneri (Rusconi). Bulletin of Carnegie Museum of Natural History, 3:1-36.
35. _. 1977b. The extinction of peccaries and a new case of survival. Annals of the New York Academy of Sciences, 288:538-544.
36. WETZEL, R. M., R. E. DUBOIS, R. L. MARTIN, AND P. MEYERS. 1975. Catagonus, an "extinct" peccary alive in Paraguay. Science, 189:379-381.
37. WOODBURNE, M. O. 1968. The cranial myology and osteology of Dicotyles tajacu, the collared peccary, and its bearing on classification. Memoirs of the Southern California Academy of Sciences, 7:1-8.
38. WRIGHT, D. B. 1989. Phylogenetic relationships of Catagonus wagneri: sister taxa from the Tertiary of North America. Pp. 281-08, in Advances in Neotropical Mammalogy (K. H. Redford and J. F. Eisenberg, eds.). The Sandhill Crane Press, Inc., Gainesville, Florida, 614 pp.
39. _. 1993. Evolution of sexually dimorphic characters in peccaries (Mammalia, Tayassuidae). Paleobiology, 19:52-70.