Extremely fast folding of a very stable leucine zipper with a strengthened hydrophobic core and lacking electrostatic interactions between helices

Biochemistry

Volumn 38, Issue 3, 1999, Pages 870-880

  Dürr, Eberhard ^a   Jelesarov, Ilian ^a   Bosshard, Hans Rudolf ^a  

^a UNIVERSITY OF ZURICH   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

DIMER; LEUCINE ZIPPER PROTEIN; PEPTIDE;

ARTICLE; ELECTRICITY; HYDROPHOBICITY; PRIORITY JOURNAL; PROTEIN FOLDING; PROTON TRANSPORT; THERMODYNAMICS;

AMINO ACID SEQUENCE; CALORIMETRY, DIFFERENTIAL SCANNING; CIRCULAR DICHROISM; COMPUTER SIMULATION; DIMERIZATION; ELECTROSTATICS; HEAT; KINETICS; LEUCINE ZIPPERS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PEPTIDES; PROTEIN DENATURATION; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; PROTONS;

EID: 0039252779     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi981891e     Document Type: Article

References (72)

1. Lupas, A. (1996) Trends Biochem. Sci. 21, 375-382.
2. Crick, F. H. C. (1953) Acta Crystallogr. 6, 689-697.
3. Cohen, C., and Parry, D. A. D. (1990) Proteins 7, 1-15.
4. Hope, I. A., and Struhl, K. (1987) EMBO J. 6, 2781-2784.
5. Landschulz, W. H., Johnson, P. F., and McKnight, S. L. (1988) Science 240, 1759-1764.
6. Hurst, H. C. (1996) Leucine Zippers: Transcription factors, Academic Press, London.
7. Hodges, R. S., Semchuk, P. D., Taneja, A. K., Kay, C. M., Parker, J. M. R., and Mant, C. T. (1988) Pept. Res. 1, 19-30.
8. Bryson, J. W., Betz, S. F., Lu, H. S., Suich, D. J., Zhou, H. X. X., O'Neil, K. T., and DeGrado, W. F. (1995) Science 270, 935-941.
9. Alber, T. (1992) Curr. Opin. Genet. Dev. 2, 205-210.
10. Vinson, C. R., Hai, T., and Boyd, S. M. (1993) Genes Dev. 7, 1047-1058.
11. Graddis, T. J., Myszka, D. G., and Chaiken, I. M. (1993) Biochemistry 32, 12664-12671.
12. O'Shea, E. K., Lumb, K. J., and Kim, P. S. (1993) Curr. Biol. 3, 658-667.
13. Krylov, D., Mikhailenko, I., and Vinson, C. (1994) EMBO J. 13, 2849-2861.
14. Zhou, N. E., Kay, C. M., and Hodges, R. S. (1994) J. Mol. Biol. 237, 500-512.
15. Kohn, W. D., Monera, O. D., Kay, C. M., and Hodges, R. S. (1995) J. Biol. Chem. 270, 25495-25506.
16. Jelesarov, I., and Bosshard, H. R. (1996) J. Mol. Biol. 263, 344-358.
17. Kohn, W. D., Kay, C. M., and Hodges, R. S. (1997) J. Mol. Biol. 267, 1039-1052.
18. Krylov, D., Barchi, J., and Vinson, C. (1998) J. Mol. Biol. 279, 959-972.
19. O'Shea, E. K., Klemm, J. D., Kim, P. S., and Alber, T. (1991) Science 254, 539-544.
20. Ellenberger, T. (1994) Curr. Opin. Struct. Biol. 4, 12-21.
21. O'Shea, E. K., Rutkowski, R., Stafford, W. F., III, and Kim, P. S. (1989) Science 245, 646-648.
22. Lamb, P., and McKnight, S. L. (1991) Trends Biochem. Sci. 16, 417-422.
23. Baxevanis, A. D., and Vinson, C. R. (1993) Curr. Opin. Genet. Dev. 3, 278-285.
24. Ozeki, S., Kato, T., Holtzer, M. E., and Holtzer, A. (1991) Biopolymers 31, 957-966.
25. Wendt, H., Baici, A., and Bosshard, H. R. (1994) J. Am. Chem. Soc. 116, 6973-6974.
26. Zitzewitz, J. A., Bilsel, O., Luo, J. B., Jones, B. E., and Matthews, C. R. (1995) Biochemistry 34, 12812-12819.
27. Wendt, H., Berger, C., Baici, A., Thomas, R. M., and Bosshard, H. R. (1995) Biochemistry 34, 4097-4107.
28. Sosnick, T. R., Jackson, S., Wilk, R. R., Englander, S. W., and Degrado, W. F. (1996) Proteins 24, 427-432.
29. Wendt, H., Leder, L., Härmä, H., Jelesarov, I., Baici, A., and Bosshard, H. R. (1997) Biochemistry 36, 204-213.
30. Jelesarov, I., Dürr, E., Thomas, R. M., and Bosshard, H. R. (1998) Biochemistry 37, 7539-7550.
31. Edelhoch, H. (1967) Biochemistry 6, 1948-1954.
32. Gill, S. C., and von Hippel, P. (1989) Anal. Biochem. 182, 319-326.
33. Milla, M. E., and Sauer, R. T. (1994) Biochemistry 33, 1125-1133.
34. Marky, L. A., and Breslauer, K. J. (1987) Biopolymers 26, 1601-1620.
35. Pace, C. N. (1986) Methods Enzymol. 131, 266-280.
36. Wyman, J., Jr. (1964) Adv. Protein Chem. 19, 223-244.
37. Plotnikov, V. V., Brandts, J. M., Lin, L. N., and Brandts, J. F. (1997) Anal. Biochem. 250, 237-244.
38. Privalov, P. L., and Pothekin, S. A. (1986) Methods Enzymol. 131, 4-51.
39. Makhatadze, G. I., and Privalov, P. L. (1995) Adv. Protein Chem. 47, 307-425.
40. Ellenberger, T. E., Brandl, C. J., Struhl, K., and Harrison, S. C. (1992) Cell 71, 1223-1237.
41. Lumb, K. J., and Kim, P. S. (1995) Biochemistry 34, 8642-8648.
42. Junius, F. K., Mackay, J. P., Bubb, W. A., Jensen, S. A., Weiss, A. S., and King, G. F. (1995) Biochemistry 34, 6164-6174.
43. Zeng, X., Herndon, A. M., and Hu, J. C. (1997) Proc. Natl. Acad. Sci. U.S.A. 94, 3673-3678.
44. Gomez, J., Hilser, V. J., Xie, D., and Freire, E. (1995) Proteins 22, 404-412.
45. Qian, H. (1994) Biophys. J. 67, 349-355.
46. von Smolukowski, M. (1917) Z. Phys. Chem. 92, 129-168.
47. Moser, C. C., and Dutton, P. L. (1988) Biochemistry 27, 2450-2461.
48. Schwarz, G. (1965) J. Mol. Biol. 11, 64-77.
49. Hammes, G. G., and Roberts, P. B. (1969) J. Am. Chem. Soc. 91, 1812-1816.
50. Williams, S., Causgrove, T. P., Gilmanshin, R., Fang, K. S., Callender, R. H., Woodruff, W. H., and Dyer, R. B. (1996) Biochemistry 35, 691-697.
51. Fersht, A. R. (1995) Proc. Natl. Acad. Sci. U.S.A. 92, 10869-10873.
52. Dill, K. (1985) Biochemistry 24, 1501-1504.
53. Sosnick, T. R., Shtilerman, M. D., Mayne, L., and Englander, S. W. (1997) Proc. Natl. Acad. Sci. U.S.A. 94, 8545-8550.
54. Dill, K. A., and Chan, H. S. (1997) Nat. Struct. Biol. 4, 10-19.
55. Baldwin, R. L. (1997) Nat. Struct. Biol. 4, 965-966.
56. Waldburger, C. D., Jonsson, T., and Sauer, R. T. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 2629-2634.
57. Lumb, K. J., and Kim, P. S. (1995) Science 268, 436-439.
58. Lumb, K. J., and Kim, P. S. (1996) Science 271, 1137-1138.
59. Lavigne, P., Kondejewski, L. H., Houston, M. E., Jr., Sönnichsen, F. D., Lix, B., Sykes, B. D., Hodges, R. S., and Kay, C. M. (1995) J. Mol. Biol. 254, 505-520.
60. Lavigne, P., Sönnichsen, F. D., Kay, C. M., and Hodges, R. S. (1996) Science 271, 1136-1137.
61. Perutz, M. F. (1978) Science 201, 1187-1191.
62. Honig, B., and Nicholls, A. (1995) Science 268, 1144-1149.
63. Zhang, L., and Hermans, J. (1993) Proteins 16, 384-392.
64. Kohn, W. D., Kay, C. M., and Hodges, R. S. (1995) Protein Sci. 4, 237-250.
65. Zhou, N. E., Kay, C. M., and Hodges, R. S. (1992) Biochemistry 31, 5739-5746.
66. Matthews, B. W. (1993) Annu. Rev. Biochem. 62, 139-160.
67. Thompson, K. S., Vinson, C. R., and Freire, E. (1993) Biochemistry 32, 5491-5496.
68. Kenar, K. T., Garcia-Moreno, B., and Freire, E. (1995) Protein Sci. 4, 1934-1938.
69. Sturtevant, J. M. (1977) Proc. Natl. Acad. Sci. U.S.A. 74, 2236-2240.
70. Murphy, K. P., and Freire, E. (1992) Adv. Protein Chem. 43, 313-361.
71. Spolar, R. S., Livingstone, J. R., and Record, M. T., Jr. (1992) Biochemistry 31, 3947-3955.
72. Makhatadze, G. I., and Privaolv, P. L. (1993) J. Mol. Biol. 232, 639-659.