The Virtual Cell project

Novartis Foundation Symposium

Volumn 247, Issue , 2002, Pages 151-161

  Loew, Leslie M ^a   Berridge, ^b   Noble, ^b  

^a UNIVERSITY OF CONNECTICUT HEALTH CENTER   (United States)

^b NONE

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; BIOLOGICAL MODEL; COMPUTER SIMULATION; CYTOLOGY; REVIEW; THEORETICAL MODEL;

ANIMALS; COMPUTER SIMULATION; CYTOLOGY; MODELS, BIOLOGICAL; MODELS, THEORETICAL;

EID: 0038819917     PISSN: None     EISSN: None     Source Type: Book Series    
DOI: None     Document Type: Conference Paper

References (18)

1. Carson JH, Cui H, Krueger W, Slepchenko B, Brumwell C, Barbarese E 2001 RNA trafficking in oligodendrocytes. In: Richter D (ed) Cell polarity and subcellular RNA localization. Springer-Verlag, Berlin, p 69-83
2. Choi YS, Resasco D, Schaff J, Slepchenko B 1999 Electro-diffusion of ions inside living cells. IMA J Math Appl Med Biol 62:207-226
3. Fink CC, Slepchenko B, Loew LM 1999a Determination of time-dependent inositol-1,4,5-trisphosphate concentrations during calcium release in a smooth muscle cell. Biophys J 77:617-628
4. Fink CC, Slepchenko B, Moraru II, Schaff J, Watras J, Loew LM 1999b Morphological control of inositol-1,4,5-trisphosphate-dependent signals. J Cell Biol 147:929-935
5. Fink CC, Slepchenko B, Moraru II, Watras J, Schaff J, Loew LM 2000 An image-based model of calcium waves in differentiated neuroblastoma cells. Biophys J 79:163-183
6. Gillespie DT 1977 Exact stochastic simulation of coupled chemical reactions. J Phys Chem 81:2340-2361
7. Gillespie DT 2001 Approximate accelerated stochastic simulation of chemically reacting systems. J Chem Phys 115:1715-1733
8. Loew LM, Schaff JC 2001 The Virtual Cell: a software environment for computational cell biology. Trends Biotechnol 19:401-406
9. Mannella CA, Pfeiffer DR, Bradshaw PC et al 2001 Topology of the mitochondrial inner membrane: dynamics and bioenergetic implications. IUBMB Life 52:93-100
10. Patankar SV 1980 Numerical heat transfer and fluid flow. Taylor & Francis, London
11. Roy P, Rajfur Z, Jones D, Marriott G, Loew LM, Jacobson K 2001 Local photorelease of caged thymosin β4 in locomoting keratocytes causes cell turning. J Cell Biol 153:1035-1048
12. Schaff J, Fink CC, Slepchenko B, Carson JH, Loew LM 1997 A general computational framework for modeling cellular structure and function. Biophys J 73:1135-1146
13. Schaff JC, Slepchenko BM, Choi Y, Wagner JM, Resasco D, Loew LM 2001 Analysis of non-linear dynamics on arbitrary geometries with the Virtual Cell. Chaos 11:115-131
14. Slepchenko BM, Bronner F 2001 Modeling of transcellular Ca transport in rat duodenum points to the coexistence of two mechanisms of apical entry. Am J Physiol 281:C270-C281
15. Slepchenko BM, Schaff JC, Choi YS 2000 Numerical approach to fast reaction-diffusion systems: application to buffered calcium waves in bistable models. J Comp Phys 162:186-218
16. Slepchenko B, Schaff JC, Carson JH, Loew LM 2002 Computational cell biology: spatiotemporal simulation of cellular events. Annu Rev Biophys Biomol Struct 31:423-441
17. Smith AE, Slepchenko BM, Schaff JC, Loew LM, Macara IG 2002 Systems analysis of Ran transport. Science 295:488-491
18. Terasaki M, Campagnola P, Rolls MM et al 2001 A new model for nuclear envelope breakdown. Mol Biol Cell 12:503-510