메뉴 건너뛰기




Volumn , Issue , 2003, Pages 114-121

Optimizing exact genetic linkage computations

Author keywords

Bayesian networks; Combinatorial Optimization; DAG Models; Genetic Linkage Analysis; Greedy Algorithms; Probabilistic Algorithms; SUPERLINK; Treewidth

Indexed keywords

ALGORITHMS; COMPUTATIONAL METHODS; DISEASES; GENES; RANDOM PROCESSES;

EID: 0038715348     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1145/640075.640089     Document Type: Conference Paper
Times cited : (26)

References (29)
  • 2
    • 0021787868 scopus 로고
    • Efficient algorithms for combinatorial problems on graphs with bounded decomposibility
    • S. Arnborg. Efficient algorithms for combinatorial problems on graphs with bounded decomposibility. BIT, 25:2-23, 1985.
    • (1985) BIT , vol.25 , pp. 2-23
    • Arnborg, S.1
  • 4
    • 0035121292 scopus 로고    scopus 로고
    • A sufficiently fast algorithm for finding close to optimal clique trees
    • A. Becker and D. Geiger. A sufficiently fast algorithm for finding close to optimal clique trees. Artificial Intelligence, 125(1-2):3-17, 2001.
    • (2001) Artificial Intelligence , vol.125 , Issue.1-2 , pp. 3-17
    • Becker, A.1    Geiger, D.2
  • 5
    • 0031972889 scopus 로고    scopus 로고
    • Automatic selection of loop breakers for genetic linkage analysis
    • A. Becker, D. Geiger, and A. A. Schäffer. Automatic selection of loop breakers for genetic linkage analysis. Hum. Hered., 48(1):4960, 1998.
    • (1998) Hum. Hered. , vol.48 , Issue.1 , pp. 4960
    • Becker, A.1    Geiger, D.2    Schäffer, A.A.3
  • 9
    • 0003329841 scopus 로고    scopus 로고
    • Bucket elimination: A unifying framework for probabilistic inference
    • J. M. I. (Ed.), editor. Kluwer Academic Press
    • R. Dechter. Bucket elimination: A unifying framework for probabilistic inference. In J. M. I. (Ed.), editor, learning in Graphical Models, pages 75-104. Kluwer Academic Press., 1998.
    • (1998) Learning in Graphical Models , pp. 75-104
    • Dechter, R.1
  • 10
    • 0015183542 scopus 로고
    • A general model for the analysis of pedigree data
    • R. C. Elston and J. Stewart. A general model for the analysis of pedigree data. Hum. Hered., 21:523-542, 1971.
    • (1971) Hum. Hered. , vol.21 , pp. 523-542
    • Elston, R.C.1    Stewart, J.2
  • 11
    • 0038558013 scopus 로고    scopus 로고
    • Exact genetic linkage computations for general pedigrees
    • M. Fishelson and D. Geiger. Exact genetic linkage computations for general pedigrees. Bioinformatics, 18(Suppl. 1):S189-S198, 2002.
    • (2002) Bioinformatics , vol.18 , Issue.SUPPL. 1
    • Fishelson, M.1    Geiger, D.2
  • 14
    • 0008091392 scopus 로고
    • Triangulation of graph - Algorithms giving small total state space
    • Department of Computer Science, Aalborg University, Denmark, March
    • U. Kjærulff. Triangulation of graph - algorithms giving small total state space. Technical Report R90-09, Department of Computer Science, Aalborg University, Denmark, March 1990.
    • (1990) Technical Report , vol.R90-09
    • Kjærulff, U.1
  • 15
    • 0038558018 scopus 로고    scopus 로고
    • Treewidth: Computational experiments
    • December
    • A. Koster, H. Bodlaender, and S. Hoesel. Treewidth: Computational experiments. Technical Report ZIB 01-38, December 2001.
    • (2001) Technical Report , vol.ZIB 01-38
    • Koster, A.1    Bodlaender, H.2    Hoesel, S.3
  • 16
    • 0028857541 scopus 로고
    • Rapid multipoint linkage analysis of recessive traits in nuclear families including homozygosity mapping
    • L. Kruglyak, M. J. Daly, and E. S. Lander. Rapid multipoint linkage analysis of recessive traits in nuclear families including homozygosity mapping. Am. J. Hum. Genet., 56:519-527, 1995.
    • (1995) Am. J. Hum. Genet. , vol.56 , pp. 519-527
    • Kruglyak, L.1    Daly, M.J.2    Lander, E.S.3
  • 17
    • 0029886532 scopus 로고    scopus 로고
    • Parametric and nonparametric linkage analysis: A unified multipoint approach
    • L. Kruglyak, M. J. Daly, M. P. Reeve-Daly, and E. S. Lander. Parametric and nonparametric linkage analysis: A unified multipoint approach. Am. J. Hum. Genet., 58(6):1347-1363, 1996.
    • (1996) Am. J. Hum. Genet. , vol.58 , Issue.6 , pp. 1347-1363
    • Kruglyak, L.1    Daly, M.J.2    Reeve-Daly, M.P.3    Lander, E.S.4
  • 18
    • 0000803318 scopus 로고
    • Construction of multilocus genetic maps in humans
    • E. S. Lander and P. Green. Construction of multilocus genetic maps in humans. In Proc. Natl. Acad. Sci., volume 84, pages 2363-2367, 1987.
    • (1987) Proc. Natl. Acad. Sci. , vol.84 , pp. 2363-2367
    • Lander, E.S.1    Green, P.2
  • 21
    • 0035095150 scopus 로고    scopus 로고
    • Rapid multipoint linkage analysis via inheritance vectors in the Elston-Stewart algorithm
    • J. R. O'Connell. Rapid multipoint linkage analysis via inheritance vectors in the Elston-Stewart algorithm. Hum. Hered., 51(4):226-240, 2001.
    • (2001) Hum. Hered. , vol.51 , Issue.4 , pp. 226-240
    • O'Connell, J.R.1
  • 22
    • 0028790963 scopus 로고
    • The VITESSE algorithm for rapid exact multilocus linkage analysis via genotype set-recoding and fuzzy inheritance
    • J. R. O'connell and D. E. Weeks. The VITESSE algorithm for rapid exact multilocus linkage analysis via genotype set-recoding and fuzzy inheritance. Nat. Genet., 11:402-408, 1995.
    • (1995) Nat. Genet. , vol.11 , pp. 402-408
    • O'Connell, J.R.1    Weeks, D.E.2
  • 24
    • 0034140791 scopus 로고    scopus 로고
    • Resolution versus search: Two strategies for SAT
    • January
    • I. Rish and R. Dechter. Resolution versus search: Two strategies for SAT. Journal of Automated Reasoning, 24(1-2):225-275, January 2000.
    • (2000) Journal of Automated Reasoning , vol.24 , Issue.1-2 , pp. 225-275
    • Rish, I.1    Dechter, R.2
  • 25
    • 0001580189 scopus 로고
    • Algorithmic aspects of vertex elimination on graphs
    • D. Rose, E. Tarjan, and G. Lueker. Algorithmic aspects of vertex elimination on graphs. SIAM Journal on Computing, 5:266-283, 1976.
    • (1976) SIAM Journal on Computing , vol.5 , pp. 266-283
    • Rose, D.1    Tarjan, E.2    Lueker, G.3
  • 29
    • 0021473698 scopus 로고
    • Simple linear-time algorithms to test chordality of graphs, test acyclicity of hypergraphs, and selectively reduce acyclic hypergraphs
    • R. Tarjan and M. Yannakakis. Simple linear-time algorithms to test chordality of graphs, test acyclicity of hypergraphs, and selectively reduce acyclic hypergraphs. SIAM Journal on Computing, 13(3):566-579, 1984.
    • (1984) SIAM Journal on Computing , vol.13 , Issue.3 , pp. 566-579
    • Tarjan, R.1    Yannakakis, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.