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Volumn 25, Issue 1, 2003, Pages 48-58

Evolutionary-based association analysis using haplotype data

Author keywords

Cladistic analysis; Coalescent; Family based study; Measured haplotype analysis; Score test

Indexed keywords

ALLELE; ARTICLE; CLADISTICS; COMPUTER PROGRAM; FAMILY STUDY; GENE LOCUS; GENETIC ASSOCIATION; GENETIC MODEL; HAPLOTYPE; HUMAN; POPULATION GENETICS; STATISTICAL MODEL;

EID: 0038449167     PISSN: 07410395     EISSN: None     Source Type: Journal    
DOI: 10.1002/gepi.10246     Document Type: Article
Times cited : (96)

References (35)
  • 1
    • 0033909546 scopus 로고    scopus 로고
    • A general test of association for quantitative traits in nuclear families
    • Abecasis GR, Cardon LR, Cookson WO. 2000. A general test of association for quantitative traits in nuclear families. Am J Hum Genet 66:279-92.
    • (2000) Am J Hum Genet , vol.66 , pp. 279-292
    • Abecasis, G.R.1    Cardon, L.R.2    Cookson, W.O.3
  • 3
    • 0032900678 scopus 로고    scopus 로고
    • Median-joining networks for inferring intraspecific phylogenies
    • Bandelt HJ, Forster P, Rohl A. 1999. Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16:37-48.
    • (1999) Mol Biol Evol , vol.16 , pp. 37-48
    • Bandelt, H.J.1    Forster, P.2    Rohl, A.3
  • 6
    • 0033237335 scopus 로고    scopus 로고
    • A generalization of the transmission/disequilibrium test for uncertain-haplotype transmission
    • Clayton DC. 1999. A generalization of the transmission/disequilibrium test for uncertain-haplotype transmission. Am J Hum Genet 65:1170-7.
    • (1999) Am J Hum Genet , vol.65 , pp. 1170-1177
    • Clayton, D.C.1
  • 7
    • 0033358595 scopus 로고    scopus 로고
    • Transmission/disequilibrium tests for extended marker haplotypes
    • Clayton DG, Jones H. 1999. Transmission/disequilibrium tests for extended marker haplotypes. Am J Hum Genet 65:1161-9.
    • (1999) Am J Hum Genet , vol.65 , pp. 1161-1169
    • Clayton, D.G.1    Jones, H.2
  • 8
    • 0027285731 scopus 로고
    • Empirical tests of some predictions from coalescent theory with applications to intraspecific phylogeny construction
    • Crandall KA, Templeton AR. 1993. Empirical tests of some predictions from coalescent theory with applications to intraspecific phylogeny construction. Genetics 134:959-69.
    • (1993) Genetics , vol.134 , pp. 959-969
    • Crandall, K.A.1    Templeton, A.R.2
  • 11
    • 0031060623 scopus 로고    scopus 로고
    • Association between common alleles of the low-density lipoprotein receptor gene region and interindividual variation in plasma lipid and apolipoprotein levels in a population-based sample from Rochester, Minnesota
    • Haviland MB, Ferrell RE, Sing CF. 1997. Association between common alleles of the low-density lipoprotein receptor gene region and interindividual variation in plasma lipid and apolipoprotein levels in a population-based sample from Rochester, Minnesota. Hum Genet 99:108-14.
    • (1997) Hum Genet , vol.99 , pp. 108-114
    • Haviland, M.B.1    Ferrell, R.E.2    Sing, C.F.3
  • 14
    • 0002556819 scopus 로고
    • On the genealogy of large populations
    • Kingman JFC. 1982. On the genealogy of large populations. Appl Probability Trust 82:27-43.
    • (1982) Appl Probability Trust , vol.82 , pp. 27-43
    • Kingman, J.F.C.1
  • 15
    • 0029886532 scopus 로고    scopus 로고
    • Parametric and nonparametric linkage analysis: A unified multipoint approach
    • Kruglyak L, Daly MJ, Reeve-Daly MP, Lander ES. 1996. Parametric and nonparametric linkage analysis: a unified multipoint approach. Am J Hum Genet 58:1347-63.
    • (1996) Am J Hum Genet , vol.58 , pp. 1347-1363
    • Kruglyak, L.1    Daly, M.J.2    Reeve-Daly, M.P.3    Lander, E.S.4
  • 18
    • 0036138183 scopus 로고    scopus 로고
    • Bayesian haplotype inference for multiple linked single nucleotide polymorphisms
    • Niu T, Qin S, Xu X, Liu J. 2002. Bayesian haplotype inference for multiple linked single nucleotide polymorphisms. Am J Hum Genet 70:157-69.
    • (2002) Am J Hum Genet , vol.70 , pp. 157-169
    • Niu, T.1    Qin, S.2    Xu, X.3    Liu, J.4
  • 19
    • 0033814569 scopus 로고    scopus 로고
    • Zero-recombinant haplotyping: Applications to fine mapping using SNPS
    • O'Connell JR. 2000. Zero-recombinant haplotyping: applications to fine mapping using SNPS. Genet Epidemiol 19:64-70.
    • (2000) Genet Epidemiol , vol.19 , pp. 64-70
    • O'Connell, J.R.1
  • 21
    • 0030557659 scopus 로고    scopus 로고
    • A nonparametric maximum likelihood approach to case-control studies with errors in covariables
    • Roeder K, Carroll RJ, Lindsay BG. 1996. A nonparametric maximum likelihood approach to case-control studies with errors in covariables. J Am Stat Assoc 91:722-32.
    • (1996) J Am Stat Assoc , vol.91 , pp. 722-732
    • Roeder, K.1    Carroll, R.J.2    Lindsay, B.G.3
  • 22
    • 0036155283 scopus 로고    scopus 로고
    • Score tests for association between traits and haplotypes when linkage phase is ambiguous
    • Schaid DJ, Rowland CM, Tines DE, Jacobson RM, Poland GA. 2002. Score tests for association between traits and haplotypes when linkage phase is ambiguous. Am J Hum Genet 70:425-34.
    • (2002) Am J Hum Genet , vol.70 , pp. 425-434
    • Schaid, D.J.1    Rowland, C.M.2    Tines, D.E.3    Jacobson, R.M.4    Poland, G.A.5
  • 23
    • 0035025410 scopus 로고    scopus 로고
    • Transmission/disequilibrium test meets measured haplotype analysis: Family-based association analysis guided by evolution of haplotypes
    • Seltman H, Roeder K, Devlin B. 2001. Transmission/disequilibrium test meets measured haplotype analysis: family-based association analysis guided by evolution of haplotypes. Am J Hum Genet 68:1250-63.
    • (2001) Am J Hum Genet , vol.68 , pp. 1250-1263
    • Seltman, H.1    Roeder, K.2    Devlin, B.3
  • 25
    • 0034994415 scopus 로고    scopus 로고
    • Evaluation of candidate genes in case-control studies: A statistical method to account for related subjects
    • Slager SL, Schaid DJ. 2001. Evaluation of candidate genes in case-control studies: a statistical method to account for related subjects. Am J Hum Genet 68:1457-62.
    • (2001) Am J Hum Genet , vol.68 , pp. 1457-1462
    • Slager, S.L.1    Schaid, D.J.2
  • 26
    • 0031025214 scopus 로고    scopus 로고
    • Estimating the age of alleles by use of intraallelic variability
    • Slatkin M, Rannala R. 1997. Estimating the age of alleles by use of intraallelic variability. Am J Hum Genet 60:447-58.
    • (1997) Am J Hum Genet , vol.60 , pp. 447-458
    • Slatkin, M.1    Rannala, R.2
  • 28
    • 0027377799 scopus 로고
    • The transmission test for linkage disequilibrium: The insulin gene and insulin-dependent diabetes mellitus (IDDM)
    • Spielman RS, McGinnis RE, Ewens WJ. 1993. The transmission test for linkage disequilibrium: the insulin gene and insulin-dependent diabetes mellitus (IDDM). Am J Hum Gen 52:506-16.
    • (1993) Am J Hum Gen , vol.52 , pp. 506-516
    • Spielman, R.S.1    McGinnis, R.E.2    Ewens, W.J.3
  • 30
    • 0028962725 scopus 로고
    • A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping or DNA sequencing. V. Analysis of case/control sampling designs: Alzheimer's disease and the apoprotein E locus
    • Templeton AR. 1995. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping or DNA sequencing. V. Analysis of case/control sampling designs: Alzheimer's disease and the apoprotein E locus. Genetics 140:403-9.
    • (1995) Genetics , vol.140 , pp. 403-409
    • Templeton, A.R.1
  • 31
    • 0023425198 scopus 로고
    • A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. I. Basic theory and an analysis of alcohol dehydrogenase activity in Drosophila
    • Templeton AR, Boerwinkle E, Sing CF. 1987. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. I. Basic theory and an analysis of alcohol dehydrogenase activity in Drosophila. Genetics 117:343-51.
    • (1987) Genetics , vol.117 , pp. 343-351
    • Templeton, A.R.1    Boerwinkle, E.2    Sing, C.F.3
  • 32
    • 0026662698 scopus 로고
    • A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation
    • Templeton AR, Crandall KA, Sing CF. 1992. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation. Genetics 132:619-33.
    • (1992) Genetics , vol.132 , pp. 619-633
    • Templeton, A.R.1    Crandall, K.A.2    Sing, C.F.3
  • 33
    • 0024268520 scopus 로고
    • A cladistic analysis of phenotype associations with haplotypes inferred from restriction endonuclease mapping. II. The analysis of natural populations
    • Templeton AR, Sing CF, Kessling A, Humphries S. 1988. A cladistic analysis of phenotype associations with haplotypes inferred from restriction endonuclease mapping. II. The analysis of natural populations. Genetics 120:1145-54.
    • (1988) Genetics , vol.120 , pp. 1145-1154
    • Templeton, A.R.1    Sing, C.F.2    Kessling, A.3    Humphries, S.4
  • 34
    • 0027278852 scopus 로고
    • A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. IV. Nested analyses with cladogram uncertainty and recombination
    • Templeton AR, Sing CF. 1993. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. IV. Nested analyses with cladogram uncertainty and recombination. Genetics 134:659-69.
    • (1993) Genetics , vol.134 , pp. 659-669
    • Templeton, A.R.1    Sing, C.F.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.