-
1
-
-
0027324744
-
Biology of DNA restriction
-
Bickle, T. A., and D. H. Kruger. 1993. Biology of DNA restriction. Microbiol. Rev. 57:434-450.
-
(1993)
Microbiol. Rev.
, vol.57
, pp. 434-450
-
-
Bickle, T.A.1
Kruger, D.H.2
-
2
-
-
0000900349
-
Single-molecule indentifications of coumarin-120 by time resolved fluorescence detection: Comparison of one and two photon excitation in solution
-
Brand, L., C. Eggeling, C. Zander, K. H. Drexhage, and C. A. M. Seidel. 1997. Single-molecule indentifications of coumarin-120 by time resolved fluorescence detection: comparison of one and two photon excitation in solution. J. Phys. Chem. 101:4313-4321.
-
(1997)
J. Phys. Chem.
, vol.101
, pp. 4313-4321
-
-
Brand, L.1
Eggeling, C.2
Zander, C.3
Drexhage, K.H.4
Seidel, C.A.M.5
-
3
-
-
0033444727
-
Ratiometric measurements and identification of single diffusing molecules
-
Dahan, M., A. A. Deniz, T. Ha, D. S. Chemla, P. G. Schultz, and S. Weiss. 1999. Ratiometric measurements and identification of single diffusing molecules. Chem. Phys. 247:85-106.
-
(1999)
Chem. Phys.
, vol.247
, pp. 85-106
-
-
Dahan, M.1
Deniz, A.A.2
Ha, T.3
Chemla, D.S.4
Schultz, P.G.5
Weiss, S.6
-
4
-
-
0036192889
-
DNA-binding interactions and conformational fluctuations of Tc3 transposase DNA binding domain examined with single molecule fluorescence spectroscopy
-
Daniel, D. C., M. Thompson, and N. W. Woodbury. 2002. DNA-binding interactions and conformational fluctuations of Tc3 transposase DNA binding domain examined with single molecule fluorescence spectroscopy. Biophys. J. 82:1654-1666.
-
(2002)
Biophys. J.
, vol.82
, pp. 1654-1666
-
-
Daniel, D.C.1
Thompson, M.2
Woodbury, N.W.3
-
5
-
-
0033818703
-
Structure of the tetrameric restriction endonuclease NgoMIV in complex with cleaved DNA
-
Deibert, M., S. Grazulis, G. Sasnauskas, V. Siksnys, and R. Huber. 2000. Structure of the tetrameric restriction endonuclease NgoMIV in complex with cleaved DNA. Nat. Struct. Biol. 7:792-799.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 792-799
-
-
Deibert, M.1
Grazulis, S.2
Sasnauskas, G.3
Siksnys, V.4
Huber, R.5
-
6
-
-
0033616580
-
Single-pair fluorescence resonance energy transfer on freely diffusing molecules: Observation of Förster distance dependence and subpopulations
-
Deniz, A. A., M. Daban, J. R. Grunwell, T. Ha, A. E. Faulhaber, D. S. Chemla, S. Weiss, and P. G. Schultz. 1999. Single-pair fluorescence resonance energy transfer on freely diffusing molecules: observation of Förster distance dependence and subpopulations. Proc. Natl. Acad. Sci. USA. 96:3670-3675.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 3670-3675
-
-
Deniz, A.A.1
Daban, M.2
Grunwell, J.R.3
Ha, T.4
Faulhaber, A.E.5
Chemla, D.S.6
Weiss, S.7
Schultz, P.G.8
-
7
-
-
0036180593
-
Fluorescence resonance energy transfer (FRET) and competing processes in donor-acceptor substituted DNA strand: A comparative study of ensemble and single-molecule data
-
Dietrich, A., V. Buschmann, C. Muller, and M. Sauer. 2002. Fluorescence resonance energy transfer (FRET) and competing processes in donor-acceptor substituted DNA strand: a comparative study of ensemble and single-molecule data. J. Biotechnology. 82:211-231.
-
(2002)
J. Biotechnology
, vol.82
, pp. 211-231
-
-
Dietrich, A.1
Buschmann, V.2
Muller, C.3
Sauer, M.4
-
8
-
-
0028229903
-
Sorting single molecules: Application to diagnostics and evolutionary biotechnology
-
Eigen, M., and R. Rigler. 1994. Sorting single molecules: application to diagnostics and evolutionary biotechnology. Proc. Natl. Acad. Sci. USA. 91:5740-5747.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 5740-5747
-
-
Eigen, M.1
Rigler, R.2
-
9
-
-
0035902832
-
DNA cleavage reactions by type II restriction enzymes that require two copies of their recognition sites
-
Embleton, M. L., V. Siksnys, and S. E. Halford. 2001. DNA cleavage reactions by type II restriction enzymes that require two copies of their recognition sites. J. Mol. Biol. 311:503-514.
-
(2001)
J. Mol. Biol.
, vol.311
, pp. 503-514
-
-
Embleton, M.L.1
Siksnys, V.2
Halford, S.E.3
-
10
-
-
0035968257
-
Sau3AI, a monometric type II restriction endonuclease that dimerizes on the DNA and thereby induces DNA loops
-
Friedhoff, P., R. Lurz, G. Luder, and A. Pingoud. 2001. Sau3AI, a monometric type II restriction endonuclease that dimerizes on the DNA and thereby induces DNA loops. J. Biol. Chem. 276:23581-23588.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 23581-23588
-
-
Friedhoff, P.1
Lurz, R.2
Luder, G.3
Pingoud, A.4
-
11
-
-
0033514435
-
Single-molecule fluorescence spectroscopy of enzyme conformational dynamics and cleavage mechanism
-
Ha, T., A. Y. Ting, J. Liang, W. B. Caldwell, A. A. Deniz, D. S. Chemla, P. G. Schultz, and S. Weiss. 1999a. Single-molecule fluorescence spectroscopy of enzyme conformational dynamics and cleavage mechanism. Proc. Natl. Acad. Sci. USA. 96:893-898.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 893-898
-
-
Ha, T.1
Ting, A.Y.2
Liang, J.3
Caldwell, W.B.4
Deniz, A.A.5
Chemla, D.S.6
Schultz, P.G.7
Weiss, S.8
-
12
-
-
0033529972
-
Ligand-induced conformational changes observed in single RNA molecules
-
Ha, T., X. Zhuang, H. D. Kim, J. W. Orr, J. R. Williamson, and S. Chu. 1999b. Ligand-induced conformational changes observed in single RNA molecules. Proc. Natl. Acad. Sci. USA. 96:9077-9082.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 9077-9082
-
-
Ha, T.1
Zhuang, X.2
Kim, H.D.3
Orr, J.W.4
Williamson, J.R.5
Chu, S.6
-
14
-
-
0037154114
-
Biological and chemical applications of fluorescence correlation spectroscopy: A review
-
Hess, S. T., S. Huang, A. A. Heikal, and W. W. Webb. 2002. Biological and chemical applications of fluorescence correlation spectroscopy: a review. Biochemistry. 41:697-705.
-
(2002)
Biochemistry
, vol.41
, pp. 697-705
-
-
Hess, S.T.1
Huang, S.2
Heikal, A.A.3
Webb, W.W.4
-
15
-
-
0033413080
-
Fluorescence resonance energy transfer between single fluorophores attached to a coiled-coil protein in aqueous solution
-
Ishii, Y., T. Yoshida, T. Funatsu, T. Wazawa, and T. Yanagida. 1999. Fluorescence resonance energy transfer between single fluorophores attached to a coiled-coil protein in aqueous solution. Chem. Phys. 247:163-173.
-
(1999)
Chem. Phys.
, vol.247
, pp. 163-173
-
-
Ishii, Y.1
Yoshida, T.2
Funatsu, T.3
Wazawa, T.4
Yanagida, T.5
-
16
-
-
0032539688
-
Real-time enzyme kinetics monitored by dual-color fluorescence cross-correlation spectroscopy
-
Kettling, U., A. Koltermann, P. Schwille, and M. Eigen. 1998. Real-time enzyme kinetics monitored by dual-color fluorescence cross-correlation spectroscopy. Proc. Natl. Acad. Sci. USA. 95:1416-1420.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 1416-1420
-
-
Kettling, U.1
Koltermann, A.2
Schwille, P.3
Eigen, M.4
-
18
-
-
0035902776
-
Analysis of DNA looping interactions by type II restriction enzyme that require two copies of their recognition sites
-
Milsom, S. E., S. E. Halford, M. L. Embleton, and M. D. Szczelkun. 2001. Analysis of DNA looping interactions by type II restriction enzyme that require two copies of their recognition sites. J. Mol. Biol. 311:515-527.
-
(2001)
J. Mol. Biol.
, vol.311
, pp. 515-527
-
-
Milsom, S.E.1
Halford, S.E.2
Embleton, M.L.3
Szczelkun, M.D.4
-
19
-
-
0029091376
-
DNA cleavage at two recognition sites by the Sfi I restriction endonuclease: Salt dependence of cis and trans interactions between distant DNA sites
-
Nobbs, T. J., and S. E. Halford. 1995. DNA cleavage at two recognition sites by the Sfi I restriction endonuclease: salt dependence of cis and trans interactions between distant DNA sites. J. Mol. Biol. 252:399-411.
-
(1995)
J. Mol. Biol.
, vol.252
, pp. 399-411
-
-
Nobbs, T.J.1
Halford, S.E.2
-
20
-
-
0034732989
-
Location of cyanine-3 on double stranded DNA: Importance for fluorescence resonance energy transfer
-
Norman, D. G., R. J. Grainger, D. Uhrin, and D. M. J. Lilley. 2000. Location of cyanine-3 on double stranded DNA: importance for fluorescence resonance energy transfer. Biochemistry. 39:6317-6324.
-
(2000)
Biochemistry
, vol.39
, pp. 6317-6324
-
-
Norman, D.G.1
Grainger, R.J.2
Uhrin, D.3
Lilley, D.M.J.4
-
21
-
-
0031577319
-
Communications between distant sites on supercoiled DNA from non-exponential kinetics for DNA synapsis by resolvase
-
Oram, M., J. F. Marko, and S. E. Halford. 1997. Communications between distant sites on supercoiled DNA from non-exponential kinetics for DNA synapsis by resolvase. J. Mol. Biol. 270:396-412.
-
(1997)
J. Mol. Biol.
, vol.270
, pp. 396-412
-
-
Oram, M.1
Marko, J.F.2
Halford, S.E.3
-
22
-
-
0002846347
-
How to determine the molar absorbance coefficient of a protein
-
T. E. Creighton, editor. IRL Press, Oxford, UK
-
Pace, C. N., and F. X. Schmid. 1997. How to determine the molar absorbance coefficient of a protein. In Protein Structure, a Practical Approach. T. E. Creighton, editor. IRL Press, Oxford, UK. 253-259.
-
(1997)
Protein Structure, A Practical Approach
, pp. 253-259
-
-
Pace, C.N.1
Schmid, F.X.2
-
23
-
-
0040182980
-
Simultaneous binding of two DNA duplexes to NtrC-enhancer complex studied by two-color fluorescence cross-correlation spectroscopy
-
Rippe, K. 2000. Simultaneous binding of two DNA duplexes to NtrC-enhancer complex studied by two-color fluorescence cross-correlation spectroscopy. Biochemistry. 39:2131-2139.
-
(2000)
Biochemistry
, vol.39
, pp. 2131-2139
-
-
Rippe, K.1
-
25
-
-
0033520420
-
The Cfr 10I restriction enzyme is functional as a tetramer
-
Siksnys, V., R. Skirgaila, G. Sasnauskas, C. Urbanke, D. Cherny, S. Grazulis, and R. Huber. 1999. The Cfr 10I restriction enzyme is functional as a tetramer. J. Mol. Biol. 291:1105-1118.
-
(1999)
J. Mol. Biol.
, vol.291
, pp. 1105-1118
-
-
Siksnys, V.1
Skirgaila, R.2
Sasnauskas, G.3
Urbanke, C.4
Cherny, D.5
Grazulis, S.6
Huber, R.7
-
27
-
-
12444275699
-
Alternative geometries of DNA looping: An analysis using the SfiL endonuclease
-
Watson, M. A., D. M. Gowers, and S. E. Halford. 2000. Alternative geometries of DNA looping: an analysis using the SfiL endonuclease. J. Mol. Bio. 289:758-797.
-
(2000)
J. Mol. Bio.
, vol.289
, pp. 758-797
-
-
Watson, M.A.1
Gowers, D.M.2
Halford, S.E.3
-
28
-
-
0033548686
-
Fluorescence spectroscopy of single biomolecules
-
Weiss, S. 1999. Fluorescence spectroscopy of single biomolecules. Science. 283:1676-1683.
-
(1999)
Science
, vol.283
, pp. 1676-1683
-
-
Weiss, S.1
-
29
-
-
0033813064
-
Measuring conformational dynamics of biomolecules by single molecule fluorescence spectroscopy
-
Weiss, S. 2000. Measuring conformational dynamics of biomolecules by single molecule fluorescence spectroscopy. Nat. Struct. Biol. 7:724-729.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 724-729
-
-
Weiss, S.1
-
30
-
-
0028988946
-
The SfiI restriction endonuclease makes a four-strand DNA break at two copies of its recognition sequence
-
Wentzell, L. M., T. J. Nobbs, and S. E. Halford. 1995. The SfiI restriction endonuclease makes a four-strand DNA break at two copies of its recognition sequence. J. Mol. Biol. 248:581-595.
-
(1995)
J. Mol. Biol.
, vol.248
, pp. 581-595
-
-
Wentzell, L.M.1
Nobbs, T.J.2
Halford, S.E.3
-
31
-
-
0035913541
-
Two new concepts to measure fluorescence resonance energy transfer via fluorescence correlation spectroscopy: Theory and experimental realizations
-
Widengren, J., E. Schweinberger, S. Berger, and C. A. M. Seidel. 2001. Two new concepts to measure fluorescence resonance energy transfer via fluorescence correlation spectroscopy: theory and experimental realizations. J. Phys. Chem. A. 105:6851-6866.
-
(2001)
J. Phys. Chem. A
, vol.105
, pp. 6851-6866
-
-
Widengren, J.1
Schweinberger, E.2
Berger, S.3
Seidel, C.A.M.4
-
32
-
-
0001526496
-
Rotiometric analysis of single-molecule fluorescence resonance energy transfer using logical combinations of threshold criteria: A study of 12-mer DNA
-
Ying, L., M. I. Wallace, S. Bakasubramanian, and D. Klenerman. 2000. Rotiometric analysis of single-molecule fluorescence resonance energy transfer using logical combinations of threshold criteria: a study of 12-mer DNA. J. Phys. Chem. B. 104:5171-5178.
-
(2000)
J. Phys. Chem. B
, vol.104
, pp. 5171-5178
-
-
Ying, L.1
Wallace, M.I.2
Bakasubramanian, S.3
Klenerman, D.4
-
33
-
-
0030285009
-
Detection and characterization of single molecules in aqueous solution
-
Zander, C., M. Sauer, K. H. Drexhage, D. S. Ko, A. Schulz, J. Wolfrum, L. Brand, C. Eggeling, and C. A. M. Seidel. 1996. Detection and characterization of single molecules in aqueous solution. Appl. Phys. B. 63:517-523.
-
(1996)
Appl. Phys. B
, vol.63
, pp. 517-523
-
-
Zander, C.1
Sauer, M.2
Drexhage, K.H.3
Ko, D.S.4
Schulz, A.5
Wolfrum, J.6
Brand, L.7
Eggeling, C.8
Seidel, C.A.M.9
-
34
-
-
0034674420
-
A single-molecule study of RNA catalysis and folding
-
Zhuang, X., L. E. Bartley, H. P. Babcock, R. Russell, T. Ha, D. Herschlag, and S. Chu. 2000. A single-molecule study of RNA catalysis and folding. Science. 288:2048-2051.
-
(2000)
Science
, vol.288
, pp. 2048-2051
-
-
Zhuang, X.1
Bartley, L.E.2
Babcock, H.P.3
Russell, R.4
Ha, T.5
Herschlag, D.6
Chu, S.7
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