-
1
-
-
0025936242
-
Differentiation of lipid-associating helices by use of three-dimensional molecular hydrophobicity potential calculations
-
Brasseur, R. 1991. Differentiation of lipid-associating helices by use of three-dimensional molecular hydrophobicity potential calculations. J. Biol. Chem. 266: 16120-16127.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 16120-16127
-
-
Brasseur, R.1
-
2
-
-
0017187836
-
The nature of the accessible and buried surfaces in proteins
-
Chothia, C. 1976. The nature of the accessible and buried surfaces in proteins. J. Mol. Biol. 105: 1-12.
-
(1976)
J. Mol. Biol.
, vol.105
, pp. 1-12
-
-
Chothia, C.1
-
3
-
-
0030939096
-
Disposition of amphiphilic helices in heteropolar environments
-
Chou, K.C., Zhang, C.T., and Maggiora, G.M. 1997. Disposition of amphiphilic helices in heteropolar environments. Proteins 28: 99-108.
-
(1997)
Proteins
, vol.28
, pp. 99-108
-
-
Chou, K.C.1
Zhang, C.T.2
Maggiora, G.M.3
-
4
-
-
0001880425
-
Chemical properties of polypeptides
-
ed. T. Creighton. W.H. Freeman and Company, New York
-
Creighton, T. 1993. Chemical properties of polypeptides. In Chemical properties of polypeptides (ed. T. Creighton), pp. 1-46. W.H. Freeman and Company, New York.
-
(1993)
Chemical Properties of Polypeptides
, pp. 1-46
-
-
Creighton, T.1
-
5
-
-
0030462271
-
Hydrophobic regions on protein surfaces: Definition based on hydration shell structure and a quick method for their computation
-
Eisenhaber, F. and Argos, P. 1996. Hydrophobic regions on protein surfaces: Definition based on hydration shell structure and a quick method for their computation. Protein Eng. 9: 1121-1133.
-
(1996)
Protein Eng.
, vol.9
, pp. 1121-1133
-
-
Eisenhaber, F.1
Argos, P.2
-
6
-
-
0031410522
-
SERF: A program for accessible surface area calculations
-
Flower, D.R. 1997. SERF: A program for accessible surface area calculations. J. Mol. Graph. Model. 15: 238-244.
-
(1997)
J. Mol. Graph. Model.
, vol.15
, pp. 238-244
-
-
Flower, D.R.1
-
7
-
-
0031565729
-
Analysis of protein-protein interaction sites using surface patches
-
Jones, S. and Thornton, J.M. 1997. Analysis of protein-protein interaction sites using surface patches. J. Mol. Biol. 272: 121-132.
-
(1997)
J. Mol. Biol.
, vol.272
, pp. 121-132
-
-
Jones, S.1
Thornton, J.M.2
-
8
-
-
0033040551
-
An atomic model for the pleated β-sheet structure of Aβ amyloid protofilaments
-
Li, L., Darden, T.A., Bartolotti, L., Kominos, D., and Pedersen, L.G. 1999. An atomic model for the pleated β-sheet structure of Aβ amyloid protofilaments. Biophys. J. 76: 2871-2878.
-
(1999)
Biophys. J.
, vol.76
, pp. 2871-2878
-
-
Li, L.1
Darden, T.A.2
Bartolotti, L.3
Kominos, D.4
Pedersen, L.G.5
-
9
-
-
0035189668
-
New method for accurate prediction of solvent accessibility from protein sequence
-
Li, X. and Pan, X.M. 2001. New method for accurate prediction of solvent accessibility from protein sequence. Proteins 42: 1-5.
-
(2001)
Proteins
, vol.42
, pp. 1-5
-
-
Li, X.1
Pan, X.M.2
-
10
-
-
0033406884
-
Prediction of protein secondary structure content
-
Liu, W. and Chou, K.C. 1999. Prediction of protein secondary structure content. Protein Eng. 12: 1041-1050.
-
(1999)
Protein Eng.
, vol.12
, pp. 1041-1050
-
-
Liu, W.1
Chou, K.C.2
-
11
-
-
0035283141
-
Prediction of protein surface accessibility with information theory
-
Naderi-Manesh, H., Sadeghi, M., Arab, S., and Moosavi Movahedi, A.A. 2001. Prediction of protein surface accessibility with information theory. Proteins 42: 452-459.
-
(2001)
Proteins
, vol.42
, pp. 452-459
-
-
Naderi-Manesh, H.1
Sadeghi, M.2
Arab, S.3
Moosavi Movahedi, A.A.4
-
12
-
-
0029889988
-
PHD: Predicting one-dimensional protein structure by profilebased neural networks
-
Rost, B. 1996. PHD: Predicting one-dimensional protein structure by profilebased neural networks. Methods Enzymol. 266: 525-539.
-
(1996)
Methods Enzymol.
, vol.266
, pp. 525-539
-
-
Rost, B.1
-
13
-
-
0028109886
-
Conservation and prediction of solvent accessibility in protein families
-
Rost, B. and Sander, C. 1994. Conservation and prediction of solvent accessibility in protein families. Proteins 20: 216-226.
-
(1994)
Proteins
, vol.20
, pp. 216-226
-
-
Rost, B.1
Sander, C.2
-
14
-
-
0036700020
-
Quantifying the accessible surface area of protein residues in their local environment
-
Samanta, U., Bahadur, R.P., and Chakrabarti, P. 2002. Quantifying the accessible surface area of protein residues in their local environment. Protein Eng. 15: 659-667.
-
(2002)
Protein Eng.
, vol.15
, pp. 659-667
-
-
Samanta, U.1
Bahadur, R.P.2
Chakrabarti, P.3
-
15
-
-
0032796425
-
Amyloid-β-sheet formation at the air-water interface
-
Schladitz, C., Vieira, E.P., Hermel, H., and Mohwald, H. 1999. Amyloid-β-sheet formation at the air-water interface. Biophys. J. 77: 3305-3310.
-
(1999)
Biophys. J.
, vol.77
, pp. 3305-3310
-
-
Schladitz, C.1
Vieira, E.P.2
Hermel, H.3
Mohwald, H.4
-
16
-
-
0015866154
-
Environment and exposure to solvent of protein atoms. Lysozyme and insulin
-
Shrake, A. and Rupley, J.A. 1973. Environment and exposure to solvent of protein atoms. Lysozyme and insulin. J. Mol. Biol. 79: 351-371.
-
(1973)
J. Mol. Biol.
, vol.79
, pp. 351-371
-
-
Shrake, A.1
Rupley, J.A.2
-
17
-
-
0029055313
-
LINUS: A hierarchic procedure to predict the fold of a protein
-
Srinivasan, R. and Rose, G.D. 1995. LINUS: A hierarchic procedure to predict the fold of a protein. Proteins 22: 81-99.
-
(1995)
Proteins
, vol.22
, pp. 81-99
-
-
Srinivasan, R.1
Rose, G.D.2
-
19
-
-
0035314074
-
Pex, analytical tools for PDB files. I. GF-Pex: Basic file to describe a protein
-
Thomas, A., Bouffioux, O., Geeurickx, D., and Brasseur, R. 2001. Pex, analytical tools for PDB files. I. GF-Pex: Basic file to describe a protein. Proteins 43: 28-36.
-
(2001)
Proteins
, vol.43
, pp. 28-36
-
-
Thomas, A.1
Bouffioux, O.2
Geeurickx, D.3
Brasseur, R.4
-
20
-
-
0036721382
-
Aromatic side-chain interactions in proteins. I. Main structural features
-
Thomas, A., Meurisse, R., Charloteaux, B., and Brasseur, R. 2002a. Aromatic side-chain interactions in proteins. I. Main structural features. Proteins 48: 628-634.
-
(2002)
Proteins
, vol.48
, pp. 628-634
-
-
Thomas, A.1
Meurisse, R.2
Charloteaux, B.3
Brasseur, R.4
-
21
-
-
0036721415
-
Aromatic side-chain interactions in proteins. II. Near- and far-sequence Phe-X pairs
-
Thomas, A., Meurisse, R., and Brasseur, R. 2002b. Aromatic side-chain interactions in proteins. II. Near- and far-sequence Phe-X pairs. Proteins 48: 635-644.
-
(2002)
Proteins
, vol.48
, pp. 635-644
-
-
Thomas, A.1
Meurisse, R.2
Brasseur, R.3
-
22
-
-
0037103004
-
Prediction of protein solvent accessibility using support vector machines
-
Yuan, Z., Burrage, K., and Mattick, J.S. 2002. Prediction of protein solvent accessibility using support vector machines. Proteins 48: 566-570.
-
(2002)
Proteins
, vol.48
, pp. 566-570
-
-
Yuan, Z.1
Burrage, K.2
Mattick, J.S.3
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