Estimating population projection matrices from multi-stage mark-recapture data

Ecology

Volumn 83, Issue 12, 2002, Pages 3257-3265

  Fujiwara, Masami ^a,b   Caswell, Hal ^a  

^a WOODS HOLE OCEANOGRAPHIC INSTITUTION   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Capture recapture studies; Eubalaena glacialis; Markov chain; Matrix population models; Multi stage mark recapture statistics; North Atlantic right whale; Population projection matrix; Survival probability; Transition probability

Indexed keywords

MARK-RECAPTURE METHOD; MARKOV CHAIN; POPULATION ESTIMATION; POPULATION MODELING; WHALE;

BALAENIDAE; CETACEA; EUBALAENA GLACIALIS;

EID: 0038308753     PISSN: 00129658     EISSN: None     Source Type: Journal    
DOI: 10.1890/0012-9658(2002)083[3257:EPPMFM]2.0.CO;2     Document Type: Article

References (34)

1. Akaike, H. 1973. Information theory and an extension of the maximum likelihood principles. Pages 267-281 in B. N. Petran and F. Csáki, editors. International symposium on information theory. Second edition. Akadémiai Kiadi, Budapest, Hungary
2. Arnason, A. 1972. Parameter estimates from mark-recapture experiments on two populations subject to migration and death. Researches on Population Ecology 13:97-113.
3. Arnason, A. M. 1973. The estimation of population size, migration rates, and survival in a stratified population. Researches in Population Ecology 15:1-8.
4. Brownie, C., J. E. Hines, J. D. Nichols, K. H. Pollock, and J. B Hestbeck. 1993. Capture-recapture studies for multiple strata including non-Markovian transitions. Biometrics 49:1173-1187.
5. Burnham, K. P., and D. R. Anderson. 1998. Model selection and inference: a practical information-theoretic approach. Springer-Verlag, New York, New York, USA.
6. Burnham, K. P., D. R. Anderson, G. C. White, C. Brownie, and K. H. Pollock. 1987. Design and analysis methods for fish survival experiments based on release-recapture. American Fisheries Society Monographs 5.
7. Caswell, H. 1978. A general formula for the sensitivity of population growth rate to changes in life history parameters. Theoretical Population Biology 14:215-230.
8. Caswell, H. 1989. Matrix population models. Sinauer Associates, Sunderland, Massachusetts, USA.
9. Caswell, H. 2001. Matrix population models: construction, analysis, and interpretation. Second edition. Sinauer Associates, Sunderland, Massachusetts, USA.
10. Caswell, H., M. Fujiwara, and S. Brault. 1999. Declining survival probability threatens the North Atlantic right whale. Proceedings of the National Academy of Sciences (USA) 96:3308-3313.
11. Crone, M., and S. Kraus. 1990. Right whale (Eubalaena glacialis) in the western North Atlantic: a catalog of identified individuals. New England Aquarium, Boston, Massachusetts, USA.
12. Deriso, R. B., T. J. Quinn II, and P. R. Neal. 1985. Catchage analysis with auxiliary information. Canadian Journal of Fisheries and Aquatic Sciences 42:815-824.
13. Forsman, E., S. DeStefano, M. Raphael, and R. Gutiérrez. 1996. Demography of the Northern Spotted Owl. Studies in Avian Biology Volume 17. Cooper Ornithological Society, Camarillo, California, USA.
14. Fournier, D., and C. P. Archibald. 1982. A general theory for analyzing catch at age data. Canadian Journal of Fisheries and Aquatic Sciences 39:1195-1207.
15. Fujiwara, M., and H. Caswell. 2001. Demography of the endangered North Atlantic right whale. Nature 414:537-541.
16. Fujiwara, M., and H. Caswell. 2002. A general approach to temporary emigration in mark-recapture analysis. Ecology 83:3266-3275.
17. Hastings, K. K., and J. W. Testa. 1998. Maternal and birth colony effects on survival of Weddell seal offspring from McMurdo Sound, Antarctica. Journal of Animal Ecology 67:722-740.
18. Hestbeck, J. B., J. D. Nichols, and R. A. Malecki. 1991. Estimates of movement and site fidelity using mark-resight data of wintering Canada Geese. Ecology 72:523-533.
19. Hines, J. 1994. MSSURVIV user's manual. National Biological Service, Patuxent Wildlife Research Center, Laurel, Maryland, USA.
20. Hosmer, D. W., and S. Lemeshow. 1989. Applied logistic regression. Wiley series in probability and mathematical statistics. Applied probability and statistics. John Wiley, New York, New York, USA.
21. Lebreton, J.-D. 1995. The future of population dynamic studies using marked individuals: a statistician's perspective. Journal of Applied Statistics 22:1009-1030.
22. Lebreton, J.-D., K. P. Burnham, J. Clobert, and D. R. Anderson. 1992. Modeling survival and testing biological hypotheses using marked animals: a unified approach with case studies. Ecological Monographs 62:67-118.
23. MATLAB. 1999. MATLAB version 5.3, release 11. MathWorks, Natick, Massachusetts, USA.
24. Nichols, J. D., J. E. Hines, K. Pollock, R. Hinz, and W. Link. 1994. Estimating breeding proportions and testing hypotheses about costs of reproduction with capture-recapture data. Ecology 75:2052-2065.
25. Nichols, J. D., and W. L. Kendall. 1995. The use of multi-state capture-recapture models to address question in evolutionary ecology. Journal of Applied Statistics 22:835-846.
26. Nichols, J. D., J. R. Sauer, K. H. Pollock, and J. B. Hestbeck. 1992. Estimating transition probabilities for stage-based population projection matrices using capture-recapture data. Ecology 73:306-312.
27. Pease, C. M., and D. J. Mattson. 1999. Demography of the Yellowstone grizzly bears. Ecology 80:957-975.
28. Quinn, T. J., and R. B. Deriso. 1999. Quantitative fish dynamics. Biological resource management series. Oxford University Press, New York, New York, USA.
29. Seber, G. A. F. 1982. The estimation of animal abundance and related parameters. Second edition. Charles Griffin, London, UK.
30. Tuljapurkar, S., and H. Caswell. 1997. Structured-population models in marine, terrestrial, and freshwater systems. Chapman and Hall, New York, New York, USA.
31. Waring, G. T., D. L. Palka, P. J. Clapham, S. Swartz, M. C. Rossman, T. V. Cole, K. D. Bisack, and L. J. Hansen. 1999. U.S. Atlantic Marine Mammal Stock Assessments, 1998. NOAA Technical Memorandum NMFS-NE-116.
32. Weimerskirch, H., N. Brothers, and P. Jouventin. 1997. Population dynamics of Wandering Albatross Diomedea exulans and Amsterdam Albatross D. amsterdamensis in the Indian Ocean and their relationships with long-line fisheries: conservation implications. Biological Conservation 79:257-270.
33. White, G. C. 1983. Numerical estimation of survival rates from band recovery and biotelemetry data. Journal of Wildlife Management 47:716-728.
34. White, G. C., and K. P. Burnham. 1999. Program MARK: Survival estimation from populations of marked animals. Bird Study 46(Supplement):120-138.