Genomic structure of mouse PIR-A6, an activating member of the paired immunoglobulin-like receptor gene family

Tissue Antigens

Volumn 61, Issue 3, 2003, Pages 220-230

  Tun, T ^a   Kubagawa, Y ^a,e   Dennis, G ^b   Burrows, P D ^b   Cooper, M D ^a,d   Kubagawa, H ^c  

^a University of Alabama at Birmingham   (United States)

^b University of Alabama at Birmingham   (United States)

^c University of Alabama at Birmingham   (United States)

^d HOWARD HUGHES MEDICAL INSTITUTE   (United States)

^e UNIVERSITY OF ALABAMA AT BIRMINGHAM   (United States)

Author keywords

Immunoglobulin like receptors; Initiator; Innate immune receptors; Short intron genes

Indexed keywords

GENE PRODUCT; IMMUNOGLOBULIN; MESSENGER RNA; PROTEIN PIR; PROTEIN PIRA; PROTEIN PIRA6; PROTEIN PIRB; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

ALTERNATIVE RNA SPLICING; ARTICLE; BINDING SITE; CHROMOSOME 7; CONTROLLED STUDY; CYTOPLASM; EXON; GENE ACTIVATION; GENE SEQUENCE; GENE STRUCTURE; GENETIC ANALYSIS; GENETIC TRANSCRIPTION; GENOME; HEMATOPOIESIS; MICROSATELLITE INSTABILITY; MOUSE; MULTIGENE FAMILY; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYADENYLATION; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN BINDING; PROTEIN DOMAIN; PROTEIN EXPRESSION; RECEPTOR GENE; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; SIGNAL TRANSDUCTION; TRANSLATION INITIATION; UNTRANSLATED REGION;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CLONING, MOLECULAR; MICE; MOLECULAR SEQUENCE DATA; RECEPTORS, IMMUNOLOGIC; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION INITIATION SITE;

RODENTIA;

EID: 0038193537     PISSN: 00012815     EISSN: None     Source Type: Journal    
DOI: 10.1034/j.1399-0039.2003.00042.x     Document Type: Article

References (36)

1. Kubagawa H, Burrows PD, Cooper MD. A novel pair of immunoglobulin-like receptors expressed by B cells and myeloid cells. Proc Natl Acad Sci U S A 1997: 94: 5261-6.
2. Hayami K, Fukuta D, Nishikawa Y et al. Molecular cloning of a novel murine cell-surface glycoprotein homologous to killer cell inhibitory receptors. J Biol Chem 1997: 272: 7320-7.
3. Maeda A, Kurosaki M, Kurosaki T. Paired immunoglobulin-like receptor (PIR)-A is involved in activating mast cells through its association with Fc receptor γ chain. J Exp Med 1998: 188: 991-5.
4. Kubagawa H, Chen CC, Ho LL et al. Biochemical nature and cellular distribution of the paired immunoglobulin-like receptors, PIR-A and PIR-B. J Exp Med 1999: 189: 309-17.
5. 632 of paired immunoglobulin-like receptor (PIR)-A3 in murine macrophages. Blood 1999: 94: 1790-6.
6. Ono M, Yuasa T, Ra C, Takai T. Stimulatory function of paired immunoglobulin-like receptor-A in mast cell line by associating with subunits common to Fc receptors. J Biol Chem 1999: 274: 30288-96.
7. Bléry M, Kubagawa H, Chen CC, Vély F, Cooper MD, Vivier E. The paired Ig-like receptor PIR-B is an inhibitory receptor that recruits the protein-tyrosine phosphatase SHP-1. Proc Natl Acad Sci U S A 1998: 95: 2446-51.
8. Maeda A, Kurosaki M, Ono M, Takai T, Kurosaki T. Requirement of SH2-containing protein tyrosine phosphatases SHP-1 and SHP-2 for paired immunogloblin-like receptor B (PIR-B) -mediated inhibitory signal. J Exp Med 1998: 187: 1355-60.
9. Yamashita Y, Ono M, Takai T. Inhibitory and stimulatory function of paired Ig-like receptor (PIP,) family in RBL-2H3 cells. J Immunol 1998: 161: 4042-7.
10. Uehara T, Bléry M, Kang DW et al. Inhibition of IgE-mediated mast cell activation by the paired Ig-like receptor PIR-B. J Clin Invest 2001: 108: 1041-50.
11. Kubagawa H, Cooper MD, Chen CC et al. Paired immunoglobulin-like receptors of activating and inhibitory types. Curr Top Microbiol Immunol 1999: 244: 137-49.
12. Takai T, Ono M. Activating and inhibitory nature of the murine paired immunoglobulin-like receptor family. Immunol Rev 2001: 181: 215-22.
13. -/- mice. Nature Immunol 2002: 3: 542-8.
14. Alley TL, Cooper MD, Chen M, Kubagawa H. Genomic structure of PIR-B, the inhibitory member of the paired immunoglobulin-like receptor gene in mice. Tissue Antigens 1998: 51: 224-31.
15. Yamashita Y, Fukuta D, Tsuji A et al. Genomic structures and chromosomal location of p91, a novel murine regulatory receptor family. J Biochem 1998: 123: 358-68.
16. Wagtmann N, Rojo S, Eichler E, Mohrenweiser H, Long EO. A new human gene complex encoding the killer cell inhibitory receptors and related monocyte/macrophage receptors. Curr Biol 1997: 7: 615-8.
17. Wilson MJ, Torkar M, Haude A et al. Plasticity in the organization and sequences of human KIR/ILT gene families. Proc Natl Acad Sci U S A 2000: 97:4778-83.
18. Liu WR, Kim J, Nwankwo C, Ashworth LK, Arm JP. Genomic organization of the human leukocyte immunoglobulin-like receptors within the leukocyte receptor complex on chromosome 19q13.4. Immunogent 2000: 51: 659-69.
19. Barten R, Torkar M, Haude A, Trowsdale J, Wilson MJ. Divergent and convergent evolution of NK-cell receptors. Trends Immunol 2001: 22: 52-7.
20. Martin AM, Kulski JK, Witt C, Pontarotti P, Christiansen FT. Leukocyte Ig-like receptor complex (LRC) in mice and men. Trends Immunol 2002: 23: 81-8.
21. Sternberg N, Smoller D, Braden T. Three new developments in P1 cloning: increased cloning efficiency, improved clone recovery, and a new P1 mouse library. Genet Anal Techn 1994: 11: 171-80.
22. Quandt K, Frech K, Karas H, Wingender E, Werner T. MatInd and MatInspector - new fast and versatile tools for detection of consensus matches in nucleotide sequence data. Nucl Acids Res 1995: 23: 4878-84.
23. Jurka J, Klonowski P, Dagman V, Pelton P. CENSOR - a program for identification and elimination of repetitive elements from DNA sequences. Comp Chem 1996: 20: 119-22.
24. Shaw G, Kamen R. A conserved AU sequence from the 3′ untranslated region of GM-CSF mRNA mediates selective mRNA degradation. Cell 1986: 46: 659-67.
25. Kyte J, Doolittle RF. A simple method for displaying the hydropathic character of a protein. J Mol Biol 1982: 157: 105-32.
26. Sunyaev SR, Eisenhaber F, Rodchenkov IV, Eisenhaber B, Tumanyan VG, Kuznetsov EN. Prediction of potential GPI-modification sites in proprotein sequences. Protein Engineering 1999: 12: 387-94.
27. Eisenhaber B, Bork P, Eisenhaber F. Prediction of potential GPI-modification sites in proprotein sequences. J Mol Biol 1999: 292: 741-58.
28. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990: 215: 403-10.
29. Ernst P, Smale ST. Combinatorial regulation of transcription I. General aspects of transcriptional control. Immunity 1995: 2: 311-9.
30. Barreda DR, Belosevic M. Transcriptional regulation of hemopoiesis. Dev Comp Immunol 2001: 25: 763-89.
31. Nagamura-Inoue T, Tamura T, Ozato K. Transcription factors that regulate growth and differentiation of myeloid cells. Intern Rev Immunol 2001: 20: 83-105.
32. Faiest S, Meyer S. Compilation of vertebrate-encoded transcription factors. Nucl Acids Res 1992: 20: 3-26.
33. Castillo-Davis CI, Mekhedov SL, Hartl DL, Koonin EV, Kondrashov FA. Selection for short introns in highly expressed genes. Nature Genet 2002: 31: 415-8.
34. Ucker DS, Yamamoto KR. Early events in the stimulation of mammary tumor virus RNA synthesis by glucocorticoids. J Biol Chem 1984: 259: 7416-20.
35. Borges L, Hsu ML, Fanger N, Kubin M, Cosman D. A family of human lymphoid and myeloid Ig-like receptors, some of which bind to MHC class I molecules. J Immunol 1997: 159: 5192-6.
36. Dennis G, Kubagawa H, Cooper MD. Paired Ig-like receptor homologs in birds and mammals share a common ancestor with mammalian Fc receptors. Proc Natl Acad Sci U S A 2000: 97: 13245-50.