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Volumn 11, Issue 4, 2003, Pages 1101-1108

Genome-wide analysis of CREB target genes reveals a core promoter requirement for cAMP responsiveness

Author keywords

[No Author keywords available]

Indexed keywords

CYCLIC AMP; CYCLIC AMP RESPONSIVE ELEMENT BINDING PROTEIN; TATA BINDING PROTEIN;

EID: 0038185273     PISSN: 10972765     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1097-2765(03)00134-5     Document Type: Article
Times cited : (219)

References (30)
  • 1
    • 0031883280 scopus 로고    scopus 로고
    • A dominant negative inhibitor of CREB reveals that it is a general mediator stimulus-dependent transcription of c-fos
    • Ahn S., Olive M., Aggarwal S., Krylov D., Ginty D., Vinson C. A dominant negative inhibitor of CREB reveals that it is a general mediator stimulus-dependent transcription of c-fos. Mol. Cell. Biol. 18:1998;967-977.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 967-977
    • Ahn, S.1    Olive, M.2    Aggarwal, S.3    Krylov, D.4    Ginty, D.5    Vinson, C.6
  • 2
    • 0035157041 scopus 로고    scopus 로고
    • Chromatin dependent cooperativity between constitutive and inducible activation domains in CREB
    • Asahara H., Santoso B., Du K., Cole P., Montminy M. Chromatin dependent cooperativity between constitutive and inducible activation domains in CREB. Mol. Cell. Biol. 21:2001;7892-7900.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 7892-7900
    • Asahara, H.1    Santoso, B.2    Du, K.3    Cole, P.4    Montminy, M.5
  • 3
    • 0024829771 scopus 로고
    • Optimized use of the firefly luciferase assay as a reporter gene in mammalian cell lines
    • Brasier A., Tate J., Habener J. Optimized use of the firefly luciferase assay as a reporter gene in mammalian cell lines. Biotechniques. 7:1989;1116-1122.
    • (1989) Biotechniques , vol.7 , pp. 1116-1122
    • Brasier, A.1    Tate, J.2    Habener, J.3
  • 5
    • 0025021192 scopus 로고
    • Both the basic region and the "leucine zipper" domain of cyclic AMP response element binding (CREB) protein are essential for transcriptional activation
    • Dwarki V.J., Montminy M., Verma I.M. Both the basic region and the "leucine zipper" domain of cyclic AMP response element binding (CREB) protein are essential for transcriptional activation. EMBO J. 9:1990;225-232.
    • (1990) EMBO J. , vol.9 , pp. 225-232
    • Dwarki, V.J.1    Montminy, M.2    Verma, I.M.3
  • 6
    • 0031743421 scopus 로고    scopus 로고
    • Profile hidden Markov models
    • Eddy S. Profile hidden Markov models. Bioniformatics. 14:1998;755-763.
    • (1998) Bioniformatics , vol.14 , pp. 755-763
    • Eddy, S.1
  • 7
    • 0033597239 scopus 로고    scopus 로고
    • The CREB constitutive activation domain interacts with TATA-binding protein-associated factor 110 (TAF110) through specific hydrophobic residues in one of the three subdomains required for both activation and TAF110 binding
    • Felinski E.A., Quinn P.G. The CREB constitutive activation domain interacts with TATA-binding protein-associated factor 110 (TAF110) through specific hydrophobic residues in one of the three subdomains required for both activation and TAF110 binding. J. Biol. Chem. 274:1999;11672-11678.
    • (1999) J. Biol. Chem. , vol.274 , pp. 11672-11678
    • Felinski, E.A.1    Quinn, P.G.2
  • 8
    • 0035146606 scopus 로고    scopus 로고
    • Recruitment of an RNA polymerase II complex is mediated by the constitutive activation domain in CREB, independently of CREB phosphorylation
    • Felinski E.A., Kim J., Lu J., Quinn P.G. Recruitment of an RNA polymerase II complex is mediated by the constitutive activation domain in CREB, independently of CREB phosphorylation. Mol. Cell. Biol. 21:2001;1001-1010.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 1001-1010
    • Felinski, E.A.1    Kim, J.2    Lu, J.3    Quinn, P.G.4
  • 9
    • 0028117301 scopus 로고
    • The cAMP regulated transcription factor CREB interacts with a component of the TFIID Complex
    • Ferreri K., Gill G., Montminy M. The cAMP regulated transcription factor CREB interacts with a component of the TFIID Complex. Proc. Natl. Acad. Sci. USA. 91:1994;1210-1213.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 1210-1213
    • Ferreri, K.1    Gill, G.2    Montminy, M.3
  • 10
    • 0346367591 scopus 로고
    • The CGTCA sequence motif is essential for biological activity of the vasoactive intestinal peptide gene cAMP-regulated enhancer
    • Fink J.S., Verhave M., Kasper S., Tsukada T., Mandel G., Goodman R.H. The CGTCA sequence motif is essential for biological activity of the vasoactive intestinal peptide gene cAMP-regulated enhancer. Proc. Natl. Acad. Sci. USA. 85:1988;6662-6666.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 6662-6666
    • Fink, J.S.1    Verhave, M.2    Kasper, S.3    Tsukada, T.4    Mandel, G.5    Goodman, R.H.6
  • 11
    • 0034894539 scopus 로고    scopus 로고
    • Identifying target sites for cooperatively binding factors
    • GuhaThakurta D., Stormo G.D. Identifying target sites for cooperatively binding factors. Bioinformatics. 17:2001;608-621.
    • (2001) Bioinformatics , vol.17 , pp. 608-621
    • GuhaThakurta, D.1    Stormo, G.D.2
  • 13
    • 0023773323 scopus 로고
    • Transcription factor ATF interacts with the TATA factor to facilitate establishment of a preinitiation complex
    • Horikoshi M., Hai T., Lin Y., Gree M.R., Roeder R.G. Transcription factor ATF interacts with the TATA factor to facilitate establishment of a preinitiation complex. Cell. 54:1988;1033-1042.
    • (1988) Cell , vol.54 , pp. 1033-1042
    • Horikoshi, M.1    Hai, T.2    Lin, Y.3    Gree, M.R.4    Roeder, R.G.5
  • 14
    • 0037101970 scopus 로고    scopus 로고
    • Function and regulation of CREB family transcription factors in the nervous system
    • Lonze B., Ginty D. Function and regulation of CREB family transcription factors in the nervous system. Neuron. 35:2002;605.
    • (2002) Neuron , vol.35 , pp. 605
    • Lonze, B.1    Ginty, D.2
  • 15
    • 0035430282 scopus 로고    scopus 로고
    • Tanscriptional regulation by the phosphorylation dependent factor CREB
    • Mayr B., Montminy M. Tanscriptional regulation by the phosphorylation dependent factor CREB. Nat. Rev. Mol. Cell. Biol. 2:2001;599-609.
    • (2001) Nat. Rev. Mol. Cell. Biol. , vol.2 , pp. 599-609
    • Mayr, B.1    Montminy, M.2
  • 16
    • 0037197962 scopus 로고    scopus 로고
    • Characterization of the c-MYC-regulated transcriptome by SAGE: Identification and analysis of c-MYC target genes
    • Menssen A., Hermeking H. Characterization of the c-MYC-regulated transcriptome by SAGE. identification and analysis of c-MYC target genes Proc. Natl. Acad. Sci. USA. 99:2002;6274-6279.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 6274-6279
    • Menssen, A.1    Hermeking, H.2
  • 18
    • 0030902507 scopus 로고    scopus 로고
    • Analysis of a cAMP-responsive activator reveals a two-component mechanism for transcriptional induction via signal-dependent factors
    • Nakajima T., Uchida C., Anderson S.F., Parvin J.D., Montminy M. Analysis of a cAMP-responsive activator reveals a two-component mechanism for transcriptional induction via signal-dependent factors. Genes Dev. 11:1997;738-747.
    • (1997) Genes Dev. , vol.11 , pp. 738-747
    • Nakajima, T.1    Uchida, C.2    Anderson, S.F.3    Parvin, J.D.4    Montminy, M.5
  • 19
    • 0024002556 scopus 로고
    • Luciferase reporter gene vectors for analysis of promoters and enhancers
    • Nordeen S. Luciferase reporter gene vectors for analysis of promoters and enhancers. Biotechniques. 6:1988;454-458.
    • (1988) Biotechniques , vol.6 , pp. 454-458
    • Nordeen, S.1
  • 20
    • 0031658513 scopus 로고    scopus 로고
    • Distinct subdomains of human TAFII130 are required for interactions with glutamine-rich transcriptional activators
    • Saluja D., Vassallo M., Tanese N. Distinct subdomains of human TAFII130 are required for interactions with glutamine-rich transcriptional activators. Mol. Cell. Biol. 18:1998;5734-5743.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 5734-5743
    • Saluja, D.1    Vassallo, M.2    Tanese, N.3
  • 21
    • 0037067233 scopus 로고    scopus 로고
    • A computerized database-scan to identify c-MYC targets
    • Schuldiner O., Shor S., Benvenisty N. A computerized database-scan to identify c-MYC targets. Gene. 292:2002;91-99.
    • (2002) Gene , vol.292 , pp. 91-99
    • Schuldiner, O.1    Shor, S.2    Benvenisty, N.3
  • 22
    • 0034634671 scopus 로고    scopus 로고
    • The structure of a CREB bZIP.somatostatin CRE complex reveals the basis for selective dimerization and divalent cation-enhanced DNA binding
    • Schumacher M.A., Goodman R.H., Brennan R.G. The structure of a CREB bZIP.somatostatin CRE complex reveals the basis for selective dimerization and divalent cation-enhanced DNA binding. J. Biol. Chem. 275:2000;35242-35247.
    • (2000) J. Biol. Chem. , vol.275 , pp. 35242-35247
    • Schumacher, M.A.1    Goodman, R.H.2    Brennan, R.G.3
  • 23
    • 0035477896 scopus 로고    scopus 로고
    • Core promoters: Active contributors to combinatorial gene regulation
    • Smale S. Core promoters. active contributors to combinatorial gene regulation Genes Dev. 15:2001;2503-2508.
    • (2001) Genes Dev. , vol.15 , pp. 2503-2508
    • Smale, S.1
  • 25
    • 0036081146 scopus 로고    scopus 로고
    • Dbtss: DataBase of human transcriptional start sites and full-length cDNAs
    • Suzuki Y., Yamashita R., Nakai K., Sugano S. Dbtss. dataBase of human transcriptional start sites and full-length cDNAs Nucleic Acids Res. 30:2002;328-331.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 328-331
    • Suzuki, Y.1    Yamashita, R.2    Nakai, K.3    Sugano, S.4
  • 26
    • 0030814764 scopus 로고    scopus 로고
    • Structure/function relationship of the cAMP response element in tyrosine hydroxylase gene transcription
    • Tinti C., Yang C., Seo H., Conti B., Kim C., Joh T.H., Kim K.S. Structure/function relationship of the cAMP response element in tyrosine hydroxylase gene transcription. J. Biol. Chem. 272:1997;19158-19164.
    • (1997) J. Biol. Chem. , vol.272 , pp. 19158-19164
    • Tinti, C.1    Yang, C.2    Seo, H.3    Conti, B.4    Kim, C.5    Joh, T.H.6    Kim, K.S.7
  • 28
    • 0033746760 scopus 로고    scopus 로고
    • Site-directed mutagenesis of large (13-kb) plasmids in a single PCR procedure
    • Wang J., Wilkinson M. Site-directed mutagenesis of large (13-kb) plasmids in a single PCR procedure. Biotechniques. 29:2000;976-978.
    • (2000) Biotechniques , vol.29 , pp. 976-978
    • Wang, J.1    Wilkinson, M.2
  • 29
    • 0022998516 scopus 로고
    • Characterization of the phosphoenolpyruvate carboxykinase (GTP) promoter-regulatory region. I. Multiple hormone regulatory elements and the effects of enhancers
    • Wynshaw-Boris A., Short J.M., Loose D.S., Hanson R.W. Characterization of the phosphoenolpyruvate carboxykinase (GTP) promoter-regulatory region. I. Multiple hormone regulatory elements and the effects of enhancers. J. Biol. Chem. 261:1986;9714-9720.
    • (1986) J. Biol. Chem. , vol.261 , pp. 9714-9720
    • Wynshaw-Boris, A.1    Short, J.M.2    Loose, D.S.3    Hanson, R.W.4
  • 30
    • 0023712739 scopus 로고
    • Phosphorylation-induced binding and transcriptional efficacy of nuclear factor CREB
    • Yamamoto K.K., Gonzalez G.A., Biggs W.H. III, Montminy M.R. Phosphorylation-induced binding and transcriptional efficacy of nuclear factor CREB. Nature. 334:1988;494-498.
    • (1988) Nature , vol.334 , pp. 494-498
    • Yamamoto, K.K.1    Gonzalez, G.A.2    Biggs W.H. III3    Montminy, M.R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.