Evaluation of the eastern (Centrocercus urophasianus urophasianus) and western (Centrocercus urophasianus phaios) subspecies of Sage-grouse using mitochondrial control-region sequence data

Conservation Genetics

Volumn 4, Issue 3, 2003, Pages 301-310

  Benedict, Nicolas G ^a   Oyler McCance, S J ^a,b   Taylor, S E ^a   Braun, C E ^c   Quinn, T W ^a  

^a UNIVERSITY OF DENVER   (United States)

^b DENVER FEDERAL CENTER   (United States)

^c Grouse Inc   (United States)

Author keywords

Centrocercus urophasianus phaios; Centrocercus urophasianus urophasianus; Control region; Mitochondrial; Sage grouse

Indexed keywords

BIODEGRADATION; BIODIVERSITY; MORPHOLOGY;

HABITAT LOSSES;

CONSERVATION;

CONSERVATION GENETICS; CONSERVATION STATUS; GAMEBIRD; HABITAT LOSS; POPULATION DECLINE;

UNITED STATES;

AVES; CENTROCERCUS; CENTROCERCUS UROPHASIANUS; CENTROCERCUS UROPHASIANUS PHAIOS; CENTROCERCUS UROPHASIANUS UROPHASIANUS; PHASIANIDAE; SALVIA;

EID: 0038170221     PISSN: 15660621     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1024089618546     Document Type: Article

References (47)

1. Aldrich JW (1946) New subspecies of birds from western North America. Proceedings of the Biological Society of Washington, 59, 129-136.
2. Aldrich JW (1963) Geographic orientation of American tetraonidae. Journal of Wildlife Management, 27, 529-544.
3. Bouzat JL, Cheng HH, Lewin HA, Westemeier RL, Brawn JD, Paige KN (1998) Genetic evaluation of a demographic bottleneck in the Greater Prairie Chicken. Conservation Biology, 12, 836-843.
4. Braun CE (1995) Status and distribution of Sage-grouse in Colorado. Prairie Naturalist, 27, 1-9.
5. Braun CE (1998) Sage-grouse declines in western North America: what are the problems? Proceedings of the Western Association of State Fish and Wildlife Agencies, 78, 139-156.
6. Emslie SD (1985) The late Pleistocene (Rancholabrean) avifauna of Little Box Elder Cave, Wyoming. University of Wyoming. Contributions in Geology, 23, 63-82.
7. Emslie SD (1986) Late Pleistocene vertebrates from Gunnison County, Colorado. Journal of Paleontology, 60, 170-176.
8. Emslie SD (2001) The early and middle Pleistocene avifauna from Porcupine Cave, Colorado. In: Early and Middle Pleistocene Biodiversity and Environmental Change: The Porcupine Cave Fauna from Colorado Fauna from Colorado (ed. Bamowsky A). Univ. California Press, Berkeley, in press.
9. Emslie SD, Heaton TH (1987) The late Pleistocene avifauna of Crystal Ball Cave, Utah. Journal of Arizona-Nevada Academy of Science, 21, 53-60.
10. Friedman M, Carlton DC (1999) Petition for a role to list the Washington population of western Sage-grouse, Centrocercus urophasianus phaios, as "threatened" or "endangered" under the Endangered Species Act, 16 U.S.C. Sec. 1531 et seq (1973) as amended. United States department of the Interior - Fish and Wildlife Service, Spokane, WA.
11. Felsenstein J (1989) PHYLIP - Phylogeny Inference Package. Version 3.2. University of Washington - Department of Genetics, Seattle, WA.
12. Giesen KM, Schoenberg TJ, Braun CE (1982) Methods for trapping Sage-grouse in Colorado. Wildlife Society Bulletin, 10, 224-231.
13. Grayson DK (1976) A note on the prehistoric avifauna of the Lower Klamath Basin. Auk, 93, 830-833.
14. Hall SA, Valastro S Jr (1995) Grassland vegetation in the southern Great Plains during the last glacial maximum. Quaternary Res., 44, 237-245.
15. Hoelzel RA, Halley J, O'Brien SJ, Campagna C, Arnbom T, Le Boef B, Ralls K, Dover GA (1993) Elephant Seal genetic variation and the use of simulation models to investigate historical population bottlenecks. Journal of Heredity, 84, 443-449.
16. Howard H (1952) The prehistoric avifauna of Smith Creek Cave, Nevada, with a description of a gigantic raptor. Bulletin of Southern California Academy of Sciences, 51, 50-54.
17. Howard H, Miller AH (1933) Bird remains from cave deposits in New Mexico. Condor, 35, 15-18.
18. Hupp JW, Braun CE (1991) Geographical variation among Sagegrouse populations in Colorado. Wilson Bulletin, 103, 255-261.
19. Johnsgard PA (1973) Grouse and Quails of North America. University of Nebraska Press, Lincoln, NE.
20. Johnsgard PA (1983) Grouse of the World. University of Nebraska Press, Lincoln, NE.
21. Kahn NW, Braun CE, Young JR, Wood S, Mata DR, Quinn TW (1999) Molecular analysis of genetic variation among large- and small-bodied Sage-grouse using mitochondrial control-region sequences. Auk, 116, 819-824.
22. Koehler PA, Anderson RS (1995) Thirty thousand years of vegetation changes in the Alabama Hills, Owens Valley, California. Quaternary Research, 43, 238-248.
23. Le Page SL, Livermore RA, Cooper DW, Taylor AC (2000) Genetic analysis of a documented population bottleneck: introduced Bennett's wallabies (Macropus rufogriseus rufogriseus) in New Zealand. Molecular Ecology, 9, 753-763.
24. Madsen DB, Currey DR (1979) Late Quaternary glacial and vegetation changes, Little Cottonwood Canyon area, Wasatch Mountains, Utah. Quaternary Research, 12, 254-270.
25. Manly B (1991) Randomization and Monte Carlo Methods in Biology. Chapman and Hall, New York, NY.
26. McDonald HG, Anderson E (1975) A late Pleistocene vertebrate fauna from southeastern Idaho. Tebiwa, 18, 19-37.
27. Miller L (1963) Birds and Indians in the Western Bulletin of the Southern California Academy of Sciences, 62, 178-191.
28. Miller L (1965) Bird remains from an archaeological site in the Beaverhead Mountains of southeastern Idaho. Tebiwa, 8, 17-20.
29. Miller MP (1997) Tools For Population Genetic Analyses (TFPGA) version 1.3. A Windows program for the analysis of allozyme and molecular population genetic data. Arizona State University, Tempe, AZ.
30. Nei M (1972) Genetic distance between populations. American Naturalist 106, 283-292.
31. Nowak CL, Nowak RS, Tausch RJ, Wigand PE (1994) Tree and shrub dynamics in northwestern Great Basin woodland and shrub steppe during the late-Pleistocene and Holocene. American Journal of Botany, 81, 265-277.
32. Oyler-McCance SJ, Kahn NW, Burnham KP, Braun CE, Quinn TW (1999) A population genetic comparison of large- and small-bodied Sage-grouse in Colorado using microsatellite and mitochondrial DNA markers. Molecular Ecology, 8, 1457-1465.
33. Quinn TW (1992) The genetic legacy of Mother Goose: phylogeographic patterns of Lesser Snow Goose (Chen caerulescens caerulescens) maternal lineages. Molecular Ecology, 1, 105-117.
34. Quinn TW, Mindell DP (1996) Mitochondrial gene order adjacent to the control region in crocodile, turtle and tuatara. Molecular Phylogenetics and Evolution, 5, 344-351.
35. Quinn TW, Wilson AC (1993) Sequence evolution in and around the control region in birds. Journal of Molecular Evolution, 37, 417-425.
36. Rogers JS (1972) Measures of genetic similarity and genetic distance. In: Studies in genetics VII, pp. 145-154. University of Texas, Austin, TX.
37. Schroeder MA, Hays DW, Livingston MF, Stream LE, Jacobson JE, Pierce DJ (2000) Changes in the distribution and abundance of Sage-grouse in Washington. Northwestern Naturalist, 81, 104-112.
38. Shufeldt RW (1913) Review of the fossil fauna of the desert region of Oregon, with a description of additional material collected there. Bulletin of the American Museum of Natural History, 32, 123-178.
39. Slatkin M (1985) Rare alleles as indicators of gene flow. Evolution, 39, 53-65.
40. Swofford DL (1999) PAUP: Phylogenetic Analysis Using Parsimony, Version 4.0 beta 4a. Sinauer Associates inc. Sunderland, MA.
41. Van Devender TR, King JE (1971) Late Pleistocene vegetational records in western Arizona. Journal of the Arizona Academy of Science, 6, 240-244.
42. Walsh PS, Metxger DA, Higuchi R (1991) Chelex 100 as a medium for single extraction of DNA for PCR-based typing from forensic material. BioTechniques, 10, 506-513.
43. Wright HE Jr., Bent AM, Hansen BS, Maher LJ Jr (1973) Present and past vegetation of the Chuska Mountains, northwestern New Mexico. Geological Society of America Bulletin, 84, 1155-1180.
44. Wright S (1978) Variability Within and Among Natural Populations. Evolution and Genetics of Populations. University of Chicago Press, Chicago, IL.
45. Young JR, Hupp JW, Bradbury JW, Braun CE (1994) Phenotypic divergence of secondary sexual traits among Sage-grouse (Centrocercus urophasianus) populations. Animal Behavior, 47, 1353-1362.
46. Young JE, Braun CE, Oyler-McCance SJ, Hupp JW, Quinn TW (2000) A new species of Sage-grouse (Phasianidae: Centrocercus) from southwestern Colorado. Wilson Bulletin, 112, 445-453.
47. Zink RM (1994) The geography of mitochondrial DNA variation, population structure, and species limits in the Fox Sparrow (Passerella iliaca). Evolution, 48, 96-111.