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Volumn 84, Issue 6, 2003, Pages 3829-3837

The flexibility of DNA double crossover molecules

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED DNA;

EID: 0038101564     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(03)75110-8     Document Type: Article
Times cited : (126)

References (34)
  • 1
    • 0022144562 scopus 로고
    • Gene synthesis machines: DNA chemistry and its uses
    • Caruthers, M. H. 1985. Gene synthesis machines: DNA chemistry and its uses. Science. 230:281-285.
    • (1985) Science , vol.230 , pp. 281-285
    • Caruthers, M.H.1
  • 2
    • 0027255843 scopus 로고
    • DNA double crossover molecules
    • Fu, T.-J., and N. C. Seeman. 1993. DNA double crossover molecules. Biochemistry. 32:3211-3220.
    • (1993) Biochemistry , vol.32 , pp. 3211-3220
    • Fu, T.-J.1    Seeman, N.C.2
  • 4
    • 0028330853 scopus 로고
    • Endonuclease VII cleavage of DNA double crossover molecules
    • Fu, T.-J., B. Kemper, and N. C. Seeman. 1994b. Endonuclease VII cleavage of DNA double crossover molecules. Biochemistry. 33:3896-3905.
    • (1994) Biochemistry , vol.33 , pp. 3896-3905
    • Fu, T.-J.1    Kemper, B.2    Seeman, N.C.3
  • 6
    • 0034620686 scopus 로고    scopus 로고
    • The construction, analysis, ligation and self-assembly of DNA triple crossover complexes
    • LaBean, T., H. Yan, J. Kopatsch, F. Liu, E. Winfree, J. H. Reif, and N. C. Seeman. 2000. The construction, analysis, ligation and self-assembly of DNA triple crossover complexes. J. Am. Chem. Soc. 122:1848-1860.
    • (2000) J. Am. Chem. Soc. , vol.122 , pp. 1848-1860
    • LaBean, T.1    Yan, H.2    Kopatsch, J.3    Liu, F.4    Winfree, E.5    Reif, J.H.6    Seeman, N.C.7
  • 7
    • 0030061199 scopus 로고    scopus 로고
    • Antiparallel DNA double crossover molecules as components for nanoconstruction
    • Li, X., X. Yang, J. Qi, and N. C. Seeman. 1996. Antiparallel DNA double crossover molecules as components for nanoconstruction. J. Am. Chem. Soc. 118:6131-6140.
    • (1996) J. Am. Chem. Soc. , vol.118 , pp. 6131-6140
    • Li, X.1    Yang, X.2    Qi, J.3    Seeman, N.C.4
  • 8
    • 0033540667 scopus 로고    scopus 로고
    • Modifying the surface features of two-dimensional DNA crystals
    • Liu, F., R. Sha, and N. C. Seeman. 1999. Modifying the surface features of two-dimensional DNA crystals. J. Am. Chem. Soc. 121:917-922.
    • (1999) J. Am. Chem. Soc. , vol.121 , pp. 917-922
    • Liu, F.1    Sha, R.2    Seeman, N.C.3
  • 9
    • 0034727072 scopus 로고    scopus 로고
    • Logical computation using algorithmic self-assembly of DNA triple crossover molecules
    • Mao, C., T. H. LaBean, J. H. Reif, and N. C. Seeman. 2000. Logical computation using algorithmic self-assembly of DNA triple crossover molecules. Nature. 407:493-496.
    • (2000) Nature , vol.407 , pp. 493-496
    • Mao, C.1    LaBean, T.H.2    Reif, J.H.3    Seeman, N.C.4
  • 10
    • 0033552937 scopus 로고    scopus 로고
    • A DNA nanomechanical device based on the B-Z transition
    • Mao, C., W. Sun, Z. Shen, and N. C. Seeman. 1999. A DNA nanomechanical device based on the B-Z transition. Nature. 397:144-146.
    • (1999) Nature , vol.397 , pp. 144-146
    • Mao, C.1    Sun, W.2    Shen, Z.3    Seeman, N.C.4
  • 11
    • 0033927772 scopus 로고    scopus 로고
    • Robust charge transport in DNA double crossover assemblies
    • Odom, D. T., E. A. Dill, and J. K. Barton. 2000. Robust charge transport in DNA double crossover assemblies. Chem. Biol. 7:475-481.
    • (2000) Chem. Biol. , vol.7 , pp. 475-481
    • Odom, D.T.1    Dill, E.A.2    Barton, J.K.3
  • 12
    • 0033729723 scopus 로고    scopus 로고
    • Multimerization-cyclization of DNA fragments as a method of conformational analysis
    • Podtelezhnikov, A., C. Mao, N. C. Seeman, and A. Vologodskii. 2000. Multimerization-cyclization of DNA fragments as a method of conformational analysis. Biophys. J. 79:2692-2704.
    • (2000) Biophys. J. , vol.79 , pp. 2692-2704
    • Podtelezhnikov, A.1    Mao, C.2    Seeman, N.C.3    Vologodskii, A.4
  • 13
    • 0031564625 scopus 로고    scopus 로고
    • A DNA decamer with a sticky end: The crystal structure of d-CGACGATCGT
    • Qiu, H., J. C. Dewan, and N. C. Seeman. 1997. A DNA decamer with a sticky end: the crystal structure of d-CGACGATCGT. J. Mol. Biol. 267:881-898.
    • (1997) J. Mol. Biol. , vol.267 , pp. 881-898
    • Qiu, H.1    Dewan, J.C.2    Seeman, N.C.3
  • 14
    • 0018976521 scopus 로고
    • Helical periodicity of DNA determined by enzyme digestion
    • Rhodes, D., and A. Klug. 1980. Helical periodicity of DNA determined by enzyme digestion. Nature. 286:573-578.
    • (1980) Nature , vol.286 , pp. 573-578
    • Rhodes, D.1    Klug, A.2
  • 16
    • 0028972024 scopus 로고
    • Identification of double Holliday junctions as intermediates in meiotic recombination
    • Schwacha, A., and N. Kleckner. 1995. Identification of double Holliday junctions as intermediates in meiotic recombination. Cell. 83:783-791.
    • (1995) Cell , vol.83 , pp. 783-791
    • Schwacha, A.1    Kleckner, N.2
  • 17
    • 0020373595 scopus 로고
    • Nucleic acid junctions and lattices
    • Seeman, N. C. 1982. Nucleic acid junctions and lattices. J. Theor. Biol. 99:237-247.
    • (1982) J. Theor. Biol. , vol.99 , pp. 237-247
    • Seeman, N.C.1
  • 18
    • 0025635653 scopus 로고
    • De novo design of sequences for nucleic acid structure engineering
    • Seeman, N. C. 1990. De novo design of sequences for nucleic acid structure engineering. J. Biomol. Struct. Dyn. 8:573-581.
    • (1990) J. Biomol. Struct. Dyn. , vol.8 , pp. 573-581
    • Seeman, N.C.1
  • 19
    • 0032860161 scopus 로고    scopus 로고
    • DNA engineering and its application to nanotechnology
    • Seeman, N. C. 1999. DNA engineering and its application to nanotechnology. Trends Biotechnol. 17:437-443.
    • (1999) Trends Biotechnol. , vol.17 , pp. 437-443
    • Seeman, N.C.1
  • 20
    • 0002721431 scopus 로고    scopus 로고
    • DNA nicks and nodes and nanotechnology
    • Seeman, N. C. 2001. DNA nicks and nodes and nanotechnology. Nano Lett. 1:22-26.
    • (2001) Nano Lett. , vol.1 , pp. 22-26
    • Seeman, N.C.1
  • 21
    • 0034687155 scopus 로고    scopus 로고
    • Direct evidence for spontaneous branch migration in antiparallel DNA Holliday junctions
    • Sha, R., F. Liu, and N. C. Seeman. 2000a. Direct evidence for spontaneous branch migration in antiparallel DNA Holliday junctions. Biochemistry. 39:11514-11522.
    • (2000) Biochemistry , vol.39 , pp. 11514-11522
    • Sha, R.1    Liu, F.2    Seeman, N.C.3
  • 22
    • 0034601829 scopus 로고    scopus 로고
    • Cleavage of symmetric immobile DNA junctions by Escherichia coli RuvC
    • Sha, R., H. Iwasaki, F. Liu, H. Shinagawa, and N. C. Seeman. 2000b. Cleavage of symmetric immobile DNA junctions by Escherichia coli RuvC. Biochemistry. 39:11982-11988.
    • (2000) Biochemistry , vol.39 , pp. 11982-11988
    • Sha, R.1    Iwasaki, H.2    Liu, F.3    Shinagawa, H.4    Seeman, N.C.5
  • 23
    • 0000545475 scopus 로고
    • Ring-closure probabilities for twisted wormlike chains. Application to DNA
    • Shimada, J., and H. Yamakawa. 1984. Ring-closure probabilities for twisted wormlike chains. Application to DNA. Macromolecules. 17:689-698.
    • (1984) Macromolecules , vol.17 , pp. 689-698
    • Shimada, J.1    Yamakawa, H.2
  • 24
    • 0033521233 scopus 로고    scopus 로고
    • No braiding of Holliday junctions in positively supercoiled DNA molecules
    • Sun, W., C. Mao, H. Iwasaki, B. Kemper, and N. C. Seeman. 1999. No braiding of Holliday junctions in positively supercoiled DNA molecules. J. Mol. Biol. 294:683-699.
    • (1999) J. Mol. Biol. , vol.294 , pp. 683-699
    • Sun, W.1    Mao, C.2    Iwasaki, H.3    Kemper, B.4    Seeman, N.C.5
  • 25
    • 0032508467 scopus 로고    scopus 로고
    • Sequence dependence of branch migratory minima
    • Sun, W., C. Mao, F. Liu, and N. C. Seeman. 1998. Sequence dependence of branch migratory minima. J. Mol. Biol. 282:59-70.
    • (1998) J. Mol. Biol. , vol.282 , pp. 59-70
    • Sun, W.1    Mao, C.2    Liu, F.3    Seeman, N.C.4
  • 26
    • 0026019344 scopus 로고
    • Extensive Y-overhanging single-stranded DNA associated with the meiosis-specific double-strand breaks
    • Sun, H., D. Treco, and J. W. Szostak. 1991. Extensive Y-overhanging single-stranded DNA associated with the meiosis-specific double-strand breaks. Cell. 64:1155-1161.
    • (1991) Cell , vol.64 , pp. 1155-1161
    • Sun, H.1    Treco, D.2    Szostak, J.W.3
  • 27
    • 0024262404 scopus 로고
    • DNA double-chain breaks in recombination of phage λ and of yeast
    • Thaler, D. S., and F. W. Stahl. 1988. DNA double-chain breaks in recombination of phage λ and of yeast. Annu. Rev. Genet. 22:169-197.
    • (1988) Annu. Rev. Genet. , vol.22 , pp. 169-197
    • Thaler, D.S.1    Stahl, F.W.2
  • 28
    • 0018370487 scopus 로고
    • Helical repeat of DNA in solution
    • Wang, J. C. 1979. Helical repeat of DNA in solution. Proc. Natl. Acad. Sci. USA. 76:200-203.
    • (1979) Proc. Natl. Acad. Sci. USA , vol.76 , pp. 200-203
    • Wang, J.C.1
  • 29
    • 0001130354 scopus 로고    scopus 로고
    • On the computational power of DNA annealing and ligation
    • R. J. Lipton and E. B. Baum, editors. American Mathematical Society, Providence, RI
    • Winfree, E. 1996. On the computational power of DNA annealing and ligation. In DNA Based Computers. R. J. Lipton and E. B. Baum, editors. American Mathematical Society, Providence, RI. 199-221.
    • (1996) DNA Based Computers , pp. 199-221
    • Winfree, E.1
  • 30
    • 0032490948 scopus 로고    scopus 로고
    • Design and self-assembly of two-dimensional DNA crystals
    • Winfree, E., F. Liu, L. A. Wenzler, and N. C. Seeman. 1998. Design and self-assembly of two-dimensional DNA crystals. Nature. 394:539-544.
    • (1998) Nature , vol.394 , pp. 539-544
    • Winfree, E.1    Liu, F.2    Wenzler, L.A.3    Seeman, N.C.4
  • 31
    • 0037011984 scopus 로고    scopus 로고
    • A robust DNA mechanical device controlled by hybridization topology
    • Yan, H., X. Zhang, Z. Shen, and N. C. Seeman. 2002. A robust DNA mechanical device controlled by hybridization topology. Nature. 415:62-65.
    • (2002) Nature , vol.415 , pp. 62-65
    • Yan, H.1    Zhang, X.2    Shen, Z.3    Seeman, N.C.4
  • 32
    • 0032582095 scopus 로고    scopus 로고
    • Ligation of DNA triangles containing double crossover molecules
    • Yang, X., L. A. Wenzler, J. Qi, X. Li, and N. C. Seeman. 1998. Ligation of DNA triangles containing double crossover molecules. J. Am. Chem. Soc. 120:9779-9786.
    • (1998) J. Am. Chem. Soc. , vol.120 , pp. 9779-9786
    • Yang, X.1    Wenzler, L.A.2    Qi, J.3    Li, X.4    Seeman, N.C.5
  • 34
    • 0028292141 scopus 로고
    • Symmetric Holliday junction crossover isomers
    • Zhang, S., and N. C. Seeman. 1994. Symmetric Holliday junction crossover isomers. J. Mol. Biol. 238:658-668.
    • (1994) J. Mol. Biol. , vol.238 , pp. 658-668
    • Zhang, S.1    Seeman, N.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.