Relationships within the Calomys callosus species group based on amplified fragment length polymorphisms

Biochemical Systematics and Ecology

Volumn 31, Issue 7, 2003, Pages 703-713

  Dragoo, J W ^a   Salazar Bravo, J ^a   Layne, L J ^a   Yates, T L ^a  

^a UNIVERSITY OF NEW MEXICO   (United States)

Author keywords

Amplified fragment length polymorphisms; Arenaviridae; Beni Department; Bolivia; Bolivian hemorrhagic fever; Calomys; Machupo virus; Systematics

Indexed keywords

DISEASE; RODENT; VIRUS;

ARENAVIRIDAE; ARENAVIRUS; CALOMYS; CALOMYS CALLOSUS; MACHUPO VIRUS; RODENTIA;

EID: 0038048805     PISSN: 03051978     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0305-1978(02)00230-2     Document Type: Article

References (28)

1. Black IV, W.C., 1998. FORTRAN programs for the analysis of RAPD-PCR markers in populations. Colorado State University, Ft. Collins, CO 80523.
2. Bremer, B., 1991. Restriction data from chloroplast DNA for phylogenetic reconstruction: is there only one accurate way of scoring? Plant Syst. Evol. 175, 39-54.
3. Bremer, K., 1988. The limits of amino acid sequence dat in angiosperm phylogenetic reconstruction. Evolution 42, 795-803.
4. Engel, S.R., Hogan, K.M., Taylor, J.F., Davis, S.K., 1998. Molecular systematics and paleobiogeography of the South-American Sigmodontine Rodents. Mol. Biol. Evol. 15, 35-49.
5. Eriksson, T., 1998. Autodecay, Version 4.0 (Program distributed by author). Department of Botany, Stockholm University, Stockholm.
6. Espinosa, M.B., Lasserre, A., Piantanida, M., Vitullo, A.D., 1997. Cytogenetics of vesper mice, Calomys (Sigmodontinae): a new karyotype from the Puna region and its implication for chromosomal phylogeny. Cell. Mol. Life Sci. 53, 583-586.
7. Farris, J.S., 1989. The retention index and the rescaled consistency indes. Cladistics 5, 417-419.
8. Johnson, K.M., Kuns, M.L., Mackenzie, R.B., Webb, P.A., Yunker, C.E., 1966. Isolation of Machupo virus from wild rodent Calomys callosus. Am. J. Trop. Med. Hyg. 15, 103-106.
9. Johnson, K.M., Wiebnaga, N.H., Mackenzie, R.B., Kuns, M.L., Tauraso, N.M., Shelokov, A., et al. 1965. Virus isolation from human cases of hemorrhagic fever in Bolivia. Proc. Soc. Exp. Biol. Med. 118, 113-118.
10. Kilgore, P.E., Peters, C.J., Mills, J.N., Rollin, P.E., Armstrong, L., Khan, A.S., et al. 1995. Prospects for the control of Bolivian Hemorrhagic Fever. Emerg. Infect. Dis. 1, 97-100.
11. Kluge, A.G., Farris, J.S., 1969. Quantitative phylogenetics and the evolution of anurans. Syst. Zool. 18, 1-32.
12. Lynch, M., Milligan, B.G., 1994. Analysis of population genetic structure with RAPD markers. Mol. Ecol. 3, 91-99.
13. Nei, M., Li, W.-H., 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. USA 76, 5269-5273.
14. Olds, N., 1988. A revision of the genus Calomys (Rodentia: Muridae). PhD dissertation, City University of New York.
15. Parsons, Y.M., Shaw, K.L., 2001. Species boundaries and genetic diversity among Hawaiian crickets of the genus Laupala identified using amplified fragment length polymorphism. Mol. Ecol. 10, 1765-1772.
16. Pavloskii, E.N., 1966. Natural Nidality of Transmissible Diseases, with Special Reference to the Landscape Epidemiology of Zooanthroponoses. Universty of Illiniois Press, Urbana.
17. Ruedas, L.A., Salazar-Bravo, J., Dragoo, J.W., Yates, T.L., 2000. The importance of being earnest: What, if anything, constitutes a "Specimen examined"? Mol. Phylogenet. Evol. 17, 129-132.
18. Salazar-Bravo, J., Dragoo, J.W., Tinnin, D.S., Yates, T.L., 2001. Phylogeny and evolution of the Neotropical rodent genus Calomys: inferences from mitochondrial DNA sequence data. Mol. Phylogenet. Evol. 20, 173-184.
19. Salazar-Bravo, J., Dragoo, J.W., Bowen, M.D., Peters, C.J., Ksiazek, T.G., Yates, T.L., 2002. Natural nidality in Bolivian Hemorrhagic Fever and the systematics of the reservoir species. Infect. Genet. Evol. 1, 191-199.
20. Schneider, S., Kueffer, J.M., Roessli, D., Excoffier, L., 2001. ARLEQUIN: a Software for Population Genetic Data Analysis, Version 2.0.0.1. University of Geneva, Geneva, Switzerland.
21. Steppan, S.J., 1993. Phylogenetic relationships among the Phyllotini (Rodentia: Sigmodontinae) using morphological characters. J. Mamm. Evol. 1, 187-213.
22. Swofford, D.L., 2000. PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods), Version 4. Sinauer Associates, Sunderland, Massachusetts.
23. Swofford, D.L., Olsen, G.J., Waddel, P.J., Hillis, D.M., 1996. Phylogenetic inference. In: Hillis, D.M., Moritz, C., Mable, B.K. (Eds.), Molecular Systematics, second ed. Sinauer Associates, Sunderland, MA, pp. 407-514.
24. Vainrub, B., Salas, R., 1994. Latin American hemorrhagic fever. Infect. Dis. Clin. North Am. 8, 47-59.
25. Vitullo, A.D., Espinosa, M.B., Merani, M.S., 1990. Cytogenetics of vesper mice, Calomys (Rodentia, Cricetidae): Robertsonian variation between Calomys callidus and Calomys venustus. Z. Saugetierkd. 55, 99-105.
26. Vos, P., Hogers, R., Bleeker, M., Reijans, M., van de Lee, T., Hornes, M., et al. 1995. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res. 23, 4407-4414.
27. Weir, B.S., Cockerham, C.C., 1984. Estimating F-statistics for the analysis of population structure. Evolution 38, 1358-1370.
28. Wright, S., 1931. Evolution in Mendelian populations. Genetics 16, 97-159.