The Methanococcus jannaschii dCTP deaminase is a bifunctional deaminase and diphosphatase

Journal of Biological Chemistry

Volumn 278, Issue 13, 2003, Pages 11100-11106

  Li, Hong ^a   Xu, Huimin ^a   Graham, David E ^a   White, Robert H ^a  

^a VIRGINIA POLYTECHNIC INSTITUTE AND STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMMONIA; BACTERIA; BIOSYNTHESIS; CATALYSIS; ENZYMES; GENES;

HOMOLOGOUS GENES;

BIOCHEMISTRY;

DEOXYCYTIDINE PHOSPHATE DEAMINASE; DEOXYCYTIDINE TRIPHOSPHATE; DEOXYURIDINE PHOSPHATE; DNA POLYMERASE; PHOSPHATASE; DCTP DEAMINASE; DEAMINASE; PRIMER DNA; RECOMBINANT PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; BACTERIAL METABOLISM; CATALYSIS; DEAMINATION; ENZYME ACTIVITY; ENZYME SPECIFICITY; GENE LOCUS; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; METHANOCOCCUS JANNASCHII; NONHUMAN; NUCLEOTIDE METABOLISM; PRIORITY JOURNAL; SALMONELLA TYPHIMURIUM; CHEMISTRY; ENZYMOLOGY; MASS SPECTROMETRY; METABOLISM; METHANOCOCCUS; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; SEQUENCE HOMOLOGY;

ARCHAEA; BACTERIA (MICROORGANISMS); METHANOCALDOCOCCUS JANNASCHII; METHANOCOCCUS; SALMONELLA TYPHIMURIUM;

AMINO ACID SEQUENCE; BASE SEQUENCE; CATALYSIS; DNA PRIMERS; METHANOCOCCUS; MOLECULAR SEQUENCE DATA; NUCLEOTIDE DEAMINASES; RECOMBINANT PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 0037837811     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M212460200     Document Type: Article

References (39)

1. Slupphaug, G., Alseth, I., Eftedal, I., Volden, G., and Krokan, H. E. (1993) Anal. Biochem. 211, 164-169
2. Poole, A., Penny, D., and Sjoberg, B. M. (2001) Nat. Rev. Mol. Cell. Biol. 2, 147-151
3. Sancar, A., and Sancar, G. B. (1988) Annu. Rev. Biochem. 57, 29-67
4. Lindahl, T., and Nyberg, B. (1974) Biochemistry 13, 3405-3410
5. Sartori, A. A., Schar, P., Fitz-Gibbon, S., Miller, J. H., and Jiricny, J. (2001) J. Biol. Chem. 276, 29979-29986
6. Hogrefe, H. H., Hansen, C. J., Scott, B. R., and Nielson, K. B. (2002) Proc. Natl. Acad. Sci. U. S. A. 99, 596-601
7. Neuhard, J. (1968) J. Biol. Chem. 96, 1519-1527
8. Shlomai, J., and Kornberg, A. (1978) J. Biol. Chem. 253, 3305-3312
9. Wang, L., and Weiss, B. (1992) J. Bacteriol. 174, 5647-5653
10. Prangishvili, W., Klenk, H.-P., Jakobs, G., Schmiechen, A., Hanselmann, C., Holz, I., and Zillig, W. (1998) J. Biol. Chem. 273, 6024-6029
11. Larsson, G., Svensson, L. A., and Nyman, P. O. (1996) Nat. Struct. Biol. 3, 532-538
12. Mol, C. D., Harris, J. M., McIntosh, E. M., and Tainer, J. A. (1996) Structure 4, 1077-1092
13. Prasad, G. S., Stura, E. A., McRee, D. E., Laco, G. S., Hasselkus-Light, C., Elder, J. H., and Stout, C. D. (1996) Protein Sci. 5, 2429-2437
14. Dauter, Z., Persson, R., Rosengren, A. M., Nyman, P. O., Wilson, K. S., and Cedergren-Zeppezauer, E. S. (1999) J. Mol. Biol. 285, 655-673
15. Beck, C. F., Eisenhardt, A. R., and Neuhard, J. (1975) J. Biol. Chem. 250, 609-616
16. McGeoch, D. J. (1990) Nucleic Acids Res. 18, 4105-4110
17. Bult, C. J., White, O., Olsen, G. J., Zhou, L., Fleischman, R. D., Sutton, G. G., Blake, J. A., FitzGerald, L. M., Clayton, R. A., Gocayne, J. D., Kerlavage, A. R., Doughterty, B. A., Tomb, J. F., Adams, M. D., Reich, C. I., Overbeek, R., Kirkness, E. F., Weinstock, K. G., Merrick, J. M., Glodek, A., Scott, J. L., Geoghagen, N. S., and Venter, J. C. (1996) Science 273, 1058-1073
18. Dawson, R. M., Elliott, D. C., Elliott, W. H., and Jones, K. M. (1985) Data for Biochemical Research, pp. 103-114, Oxford University Press Inc., New York
19. Graupner, M., Xu, H., and White, R. H. (2000) J. Bacteriol. 182, 3688-3692
20. Tabor, S., and Richardson, C. C. (1985) Proc. Natl. Acad. Sci. U. S. A. 82, 1074-1078
21. Graham, D. E., Xu, H., and White, R. H. (2003) Biochemistry 41, 15074-15084
22. Pham, D. N., and Burgess, B. K. (1993) Biochemistry 32, 13725-13731
23. Poyner, R. R., Cleland, W. W., and Reed, G. H. (2001) Biochemistry 40, 8009-8017
24. Weber, D. J., Bhatnagar, S. K., Bullions, L. C., Bessman, M. J., and Mildvan, A. S. (1992) J. Biol. Chem. 267, 16939-16942
25. Cárdenas, M. L. (2001) Methods 24, 175-180
26. Betts, L., Xiang, S., Short, S. A., Wolfenden, R., and Carter, C. W. J. (1994) J. Mol. Biol. 235, 635-656
27. Xiang, S., Short, S. A., Wolfenden, R., and Carter, C. W. J. (1997) Biochemistry 36, 4768-4774
28. Johansson, E., Mejlhede, N., Neuhard, J., and Larsen, S. (2002) Biochemistry 41, 2563-2570
29. Moore, J. T., Silversmith, R. E., Maley, G. F., and Maley, F. (1993) J. Biol. Chem. 268, 2288-2291
30. Serre, V., Guy, H., Liu, X., Penverne, B., Hervé, G., and Evans, D. (1998) J. Mol. Biol. 281, 363-377
31. Penverne, B., Belkaid, M., and Hervé, G. (1994) Arch. Biochem. Biophys. 309, 85-93
32. Wilson, K. S., and Quiocho, F. A. (1993) Biochemistry 32, 1689-1694
33. Wilson, K. S., Rudolph, F. B., and Quiocho, F. A. (1991) Science 252, 1278-1284
34. Prasad, G. S. (2001) Curr. Protein Pept. Sci. 2, 301-311
35. Harris, J. M., McIntosh, E. M., and Muscat, E. O. (1999) J. Mol. Biol. 288, 275-287
36. Larsson, G., Nyman, P. O., and Kvassman, J. (1996) J. Biol. Chem. 271, 24010-24016
37. Baldo, A. M., and McClure, M. A. (1999) J. Virol. 73, 7710-7721
38. Gerlt, J. A., and Babbitt, P. C. (2001) Annu. Rev. Biochem. 70, 209-246
39. Thompson, J. D., Higgins, D. G., and Gibson, T. J. (1994) Nucleic Acids Res. 22, 4673-4680