Secondary structures common to chloroplast mRNA 3′-untranslated regions direct cleavage by CSP41, an endoribonuclease belonging to the short chain dehydrogenase/reductase superfamily

Journal of Biological Chemistry

Volumn 278, Issue 28, 2003, Pages 25832-25838

  Bollenbach, Thomas J ^b   Stern, David B ^a  

^a Boyce Thompson Institute for Plant Research   (United States)

^b NONE

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; PROTEINS; SUBSTRATES;

CHLOROPLAST;

RNA;

ETHIDIUM BROMIDE; MESSENGER RNA; NUCLEOTIDE; OXIDOREDUCTASE; PROTEIN CSP41; RIBONUCLEASE; UNCLASSIFIED DRUG;

3' UNTRANSLATED REGION; AMINO ACID SEQUENCE; ARTICLE; CHLOROPLAST; ENZYME ACTIVITY; ENZYME SPECIFICITY; ENZYME SUBSTRATE; GENE DELETION; GENE INSERTION; GENE MUTATION; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN FAMILY; PROTEIN MOTIF; PROTEIN PROTEIN INTERACTION; RNA CLEAVAGE; RNA STRUCTURE;

3' UNTRANSLATED REGIONS; BASE SEQUENCE; BINDING, COMPETITIVE; CHLOROPLASTS; CYTOCHROME B GROUP; CYTOCHROME B6F COMPLEX; DOSE-RESPONSE RELATIONSHIP, DRUG; ENDORIBONUCLEASES; ETHIDIUM; GENE DELETION; INTERCALATING AGENTS; MOLECULAR SEQUENCE DATA; MUTATION; NUCLEIC ACID CONFORMATION; PROTEIN BINDING; PROTEIN STRUCTURE, SECONDARY; RNA; RNA, MESSENGER; SUBSTRATE SPECIFICITY; TIME FACTORS;

INSERTION SEQUENCES;

EID: 0037493295     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M303559200     Document Type: Article

References (32)

1. Stern, D. B., Jones, H., and Gruissem, W. (1989) J. Biol. Chem. 264, 18742-18750
2. Chen, H. C., and Stern, D. B. (1991) Mol. Cell Biol. 11, 4380-4388
3. Memon, A. R., Meng, B., and Mullet, J. E. (1996) Plant Mol. Biol. 30, 1195-1205
4. Chen, H., and Stern, D. B. (1991) J. Biol. Chem. 266, 24205-24211
5. Stern, D. B., and Gruissem, W. (1987) Cell 51, 1145-1157
6. Stern, D. B., and Gruissem, W. (1989) Plant Mol. Biol. 13, 615-625
7. Monde, R. A., Schuster, G., and Stern, D. B. (2000) Biochimie (Paris) 82, 573-582
8. Klaff, P. (1995) Nucleic Acids Res. 23, 4885-4892
9. Kudla, J., Hayes, R., and Gruissem, W. (1996) EMBO J. 15, 7137-7146
10. Nickelsen, J., and Link, G. (1993) Plant J. 3, 537-544
11. Hayes, R., Kudla, J., Schuster, G., Gabay, L., Maliga, P., and Gruissem, W. (1996) EMBO J. 15, 1132-1141
12. Yehudai-Resheff, S., Hirsh, M., and Schuster, G. (2001) Mol. Cell. Biol. 21, 5408-5416
13. Baginsky, S., Shteiman-Kotler, A., Liveanu, V., Yehudai-Resheff, S., Bellaoui, M., Settlage, R. E., Shabanowitz, J., Hunt, D. F., Schuster, G., and Gruissem, W. (2001) RNA (N. Y.) 7, 1464-1475
14. Yang, J., Schuster, G., and Stern, D. B. (1996) Plant Cell 8, 1409-1420
15. Yang, J., and Stern, D. B. (1997) J. Biol. Chem. 272, 12784-12880
16. Baker, M. E., Grundy, W. N., and Elkan, C. P. (1998) Biochem. Biophys. Res. Commun. 248, 250-254
17. Kallberg, Y., Oppermann, U., Jornvall, H., and Persson, B. (2002) Protein Sci. 11, 636-641
18. Bellamacina, C. R. (1996) FASEB J. 10, 1257-1269
19. Evguenieva-Hackenberg, E., Schiltz, E., and Klug, G. (2002) J. Biol. Chem. 277, 46145-46150
20. Lowman, H. B., and Draper, D. E. (1986) J. Biol. Chem. 261, 5396-5403
21. McGrath, M., Cascio, D., Williams, R., Johnson, D., Greene, M., and McPherson, A. (1987) Mol. Pharmacol. 32, 600-605
22. Calin-Jageman, I., Amarasinghe, A. K., and Nicholson, A. W. (2001) Nucleic Acids Res. 29, 1915-1925
23. Torgerson, P. M., Drickamer, H. G., and Weber, G. (1980) Biochemistry 19, 3957-3960
24. Uchida, T., and Egami, F. (1967) J. Biochem. (Tokyo) 61, 44-53
25. Abou Elela, S., and Ares, M., Jr. (1998) EMBO J. 17, 3738-3746
26. Bevilacqua, P. C., George, C. X., Samuel, C. E., and Cech, T. R. (1998) Biochemistry 37, 6303-6316
27. Ryter, J. M., and Schultz, S. C. (1998) EMBO J. 17, 7505-7513
28. Lebars, I., Lamontagne, B., Yoshizawa, S., Aboul-Elela, S., and Fourmy, D. (2001) EMBO J. 20, 7250-7258
29. Ramos, A., Grunert, S., Adams, J., Micklem, D. R., Proctor, M. R., Freund, S., Bycroft, M., St. Johnston, D., and Varani, G. (2000) EMBO J. 19, 997-1009
30. Nagel, R., and Ares, M., Jr. (2000) RNA (N. Y.) 6, 1142-1156
31. Singh, R., and Green, M. R. (1993) Science 259, 365-368
32. Nagy, E., and Rigby, W. F. C. (1995) J. Biol. Chem. 270, 2755-2763