DomCut: Prediction of inter-domain linker regions in amino acid sequences

Bioinformatics

Volumn 19, Issue 5, 2003, Pages 673-674

  Suyama, Mikita ^a,c   Ohara, Osamu ^a,b  

^a KAZUSA DNA RESEARCH INSTITUTE   (Japan)

^b RIKEN YOKOHAMA INSTITUTE   (Japan)

^c EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID;

ACCURACY; AMINO ACID SEQUENCE; ARTICLE; CALCULATION; COMPUTER INTERFACE; COMPUTER PREDICTION; COMPUTER PROGRAM; DATA BASE; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN DOMAIN; SEQUENCE ANALYSIS;

EID: 0037460953     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btg031     Document Type: Article

References (5)

1. Bairoch,A. and Apweiler,R. (2000) The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000. Nucleic Acids Res., 28, 45-48.
2. George,R.A. and Heringa,J. (2002) SnapDRAGON: a method to delineate protein structural domains from sequence data. J. Mol. Biol., 316, 839-851.
3. Kyte,J. and Doolittle,R.F. (1982) A simple method for displaying the hydropathic character of a protein. J. Mol. Biol., 157, 105-132.
4. Wheelan,S.J., Marchler-Bauer,A. and Bryant,S.H. (2000) Domain size distributions can predict domain boundaries. Bioinformatics, 16, 613-618.
5. Wootton,J.C. (1994) Non-globular domains in protein sequences: automated segmentation using complexity measures. Comput. Chem., 18, 269-285.