CRF06-cpx is the predominant HIV-1 variant in AIDS patients from Ouagadougou, the capital city of Burkina Faso

AIDS

Volumn 17, Issue 3, 2003, Pages 441-442

  Ouédraogo Traoré, Rasmata ^a   Montavon, Celine ^b   Sanou, Thomas ^c   Vidal, Nicole ^b   Sangaré, Lassana ^d   Sanou, Idrissa ^d   Soudré, Robert ^d   Mboup, Souleymane ^e   Delaporte, Eric ^b   Peeters, Martine ^b  

^a Ctr Hosp Natl Pediat Charles G   (Burkina Faso)

^b INSTITUT DE RECHERCHE POUR LE DÉVELOPPEMENT   (France)

^c Ctr de Traitement Ambulatoire (CTA)   (Burkina Faso)

^d Centre Hospitalier National YO   (Burkina Faso)

^e Centre Hospitalier Universitaire Aristide Le Dantec de Dakar   (Senegal)

Author keywords

[No Author keywords available]

Indexed keywords

GAG PROTEIN;

ACQUIRED IMMUNE DEFICIENCY SYNDROME; ARTICLE; BURKINA FASO; CONTROLLED STUDY; EPIDEMIC; GENETIC VARIABILITY; HUMAN IMMUNODEFICIENCY VIRUS 1; NONHUMAN; PRIORITY JOURNAL; VIRUS ENVELOPE; VIRUS RECOMBINANT; VIRUS STRAIN; VIRUS TYPING;

BURKINA FASO; GENES, ENV; GENES, GAG; GENOTYPE; HIV INFECTIONS; HIV-1; HUMANS; URBAN HEALTH;

EID: 0037436186     PISSN: 02699370     EISSN: None     Source Type: Journal    
DOI: 10.1097/00002030-200302140-00019     Document Type: Article

References (12)

1. Robertson DL, Anderson JP, Bradac JA, Carr JK, Foley B, Funkhouser RK, et al. HIV-1 nomenclature proposal. Science 2000, 288:55-56.
2. Peeters M, Sharp PM. Genetic diversity of HIV-1: the moving target. AIDS 2000, 14 (Suppl. 3):S129-S140.
3. McCutchan FE. Understanding the genetic diversity of HIV-1. AIDS 2000, 14 (Suppl. 3):S31-S44.
4. Oelrichs RB, Workman C, Laukkanen T, McCutchan FE, Deacon NJ. A novel subtype A/G/J recombinant full-length HIV type 1 genome from Burkina Faso. AIDS Res Hum Retroviruses 1998, 14:1495-1500.
5. Montavon C, Bibollet-Ruche F, Robertson D, Koumare B, Mulanga C, Esu-Williams E, et al. The identification of a complex A/G/I/J recombinant HIV type 1 virus in various West African countries. AIDS Res Hum Retroviruses 1999, 15:1707-1712.
6. Montavon C, Toure-Kane C, Nkengasong JN, Vergne L, Hertogs K, Mboup S, et al. CRF06-cpx: a new circulating recombinant form of HIV-1 in West Africa involving subtypes A, G, K, and J. J Acquir Immune Defic Syndr 2002, 29:522-530.
7. Toure-Kane C, Montavon C, Faye MA, Gueye PM, Sow PS, Ndoye I, et al. Identification of all HIV type 1 group M subtypes in Senegal, a country with low and stable seroprevalence. AIDS Res Hum Retroviruses 2000, 16:603-609.
8. Thompson JD, Higgins DG, Gibson TJ. CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucl Acids Res 1994, 22:4673-4680.
9. Saitou N, Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987, 4:406-425.
10. Montavon C, Toure-Kane C, Liegeois F, Mpoudi E, Bourgeois A, Vergne L, et al. Most envand gag subtype A HIV-1 viruses circulating in West and West Central Africa are similar to the prototypeAG recombinant virus IBNG. J Acquir Immune Defic Syndr 2000, 23:363-374.
11. Carr JK, Laukkanen T, Salminen MO, Albert J, Alaeus A, Kim B, et al. Characterization of subtype A HIV-1 from Africa by full genome sequencing. AIDS 1999, 13:1819-1826.
12. Toure Kane C, Peeters M, Mamadou S, Ouédraogo R, Koyalta D, Malonga G, et al. HIV-1 group M subtypes in Africa: predominance of CRF02 and CRF06 in West Africa. In: 9th International Workshop on HIV Dynamics and Evolution. Lake Arrowhead, CA, 17-20 March 2002.