A family history of deoxyribonuclease II: Surprises from Trichinella spiralis and Burkholderia pseudomallei

Gene

Volumn 305, Issue 1, 2003, Pages 1-12

  MacLea, Kyle S ^a   Krieser, Ronald J ^a,b   Eastman, Alan ^a  

^a DARTMOUTH MEDICAL SCHOOL   (United States)

^b MASSACHUSETTS GENERAL HOSPITAL   (United States)

Author keywords

Deoxyribonuclease II ; Deoxyribonuclease II ; Endonuclease; Fowlpox; NUC 1; Protein structure

Indexed keywords

DEOXYRIBONUCLEASE II;

ARTICLE; BURKHOLDERIA PSEUDOMALLEI; DICTYOSTELIUM; MUTATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN EXPRESSION; PROTEIN STRUCTURE; SEQUENCE ANALYSIS; TRICHINELLA SPIRALIS; TRICHOMONAS VAGINALIS; UNINDEXED SEQUENCE;

BACTERIA (MICROORGANISMS); BURKHOLDERIA; BURKHOLDERIA PSEUDOMALLEI; CAENORHABDITIS; CAENORHABDITIS ELEGANS; DICTYOSTELIUM; METAZOA; MYXOGASTRIA; NEMATODA; PROTOZOA; TRICHINELLA PSEUDOSPIRALIS; TRICHINELLA SPIRALIS; TRICHOMONAS VAGINALIS;

EID: 0037434627     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(02)01233-7     Document Type: Article

References (32)

1. Afonso C.L., Tulman E.R., Lu Z., Zsak L., Kutish G.F., Rock D.L. The genome of fowlpox virus. J. Virol. 74:2000;3815-3831.
2. Aparicio S., et al. Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes. Science. 297:2002;1301-1310.
3. Bernardi G., Appella E., Zito R. Studies on acid deoxyribonuclease. III. Physical and chemical properties of hog spleen acid deoxyribonuclease. Biochemistry. 4:1965;1725-1729.
4. Bessette P.H., Aslund F., Beckwith J., Georgiou G. Efficient folding of proteins with multiple disulfide bonds in the Escherichia coli cytoplasm. Proc. Natl. Acad. Sci. USA. 96:1999;13703-13708.
5. Catcheside D.G., Holmes B. The action of enzymes on chromosomes. Symp. Soc. Exp. Biol. 1:1947;225-231.
6. De Rycke J., Oswald E. Cytolethal distending toxin (CDT): a bacterial weapon to control host cell proliferation? FEMS Microbiol. Lett. 203:2001;141-148.
7. Eastman, A., Krieser, R., 2001. Deoxyribonuclease II proteins and cDNAs. United States Patent No. 6,184,034.
8. Friedhoff P., Kolmes B., Gimadutdinow O., Wende W., Krause K.L., Pingoud A. Analysis of the mechanism of the Serratia nuclease using site-directed mutagenesis. Nucleic Acids Res. 24:1996;2632-2639.
9. Ikeda S., Takata N. Deoxyribonuclease II purified from Euglena gracilis SM-ZK, a chloroplast-lacking mutant: comparison with porcine spleen deoxyribonuclease II. Comp. Biochem. Physiol. B Biochem. Mol. Biol. 131:2002;519-525.
10. Kawane K., Fukuyama H., Kondoh G., Takeda J., Ohsawa Y., Uchiyama Y., Nagata S. Requirement of DNase II for definitive erythropoiesis in the mouse fetal liver. Science. 292:2001;1546-1549.
11. Krieser R.J., Eastman A. The cloning and expression of human deoxyribonuclease II: a possible role in apoptosis. J. Biol. Chem. 273:1998;30909-30914.
12. Krieser R.J., Eastman A. Deoxyribonuclease II: structure and chromosomal localization of the murine gene, and comparison with the genomic structure of the human and three C. elegans homologs. Gene. 252:2000;155-162.
13. Krieser R.J., MacLea K.S., Park J.P., Eastman A. The cloning, genomic structure, localization, and expression of human deoxyribonuclease IIβ Gene. 269:2001;205-216.
14. Krieser R.J., MacLea K.S., Longnecker D.S., Fields J.L., Fiering S., Eastman A. Deoxyribonuclease IIα is required for DNA digestion during the phagocytic phase of apoptosis and its loss causes perinatal lethality. Cell Death Differ. 9:2002;956-962.
15. Laidlaw S.M., Anwar M.A., Thomas W., Green P., Shaw K., Skinner M.A. Fowlpox virus encodes non-essential homologs of cellular alpha-SNAP, PC-1, and an orphan human homolog of a secreted nematode protein. J. Virol. 72:1998;6742-6751.
16. Liao T.-H. The subunit structure and active site sequence of porcine spleen deoxyribonuclease. J. Biol. Chem. 260:1985;10708-10713.
17. Lyon C.J., Evans C.J., Bill B.R., Otsuka A.J., Aguilera R.J. The C. elegans apoptotic nuclease NUC-1 is related in sequence and activity to mammalian DNase II. Gene. 252:2000;147-154.
18. MacLea K.S., Krieser R.J., Eastman A. Revised structure of the active form of human deoxyribonuclease IIα Biochem. Biophys. Res. Commun. 292:2002;415-421.
19. Meiss G., Scholz S.R., Korn C., Gimadutdinow O., Pingoud A. Identification of functionally relevant histidine residues in the apoptotic nuclease CAD. Nucleic Acids Res. 29:2001;3901-3909.
20. Nielsen H., Engelbrecht J., Brunak S., von Heijne G. Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng. 10:1997;1-6.
21. O'Quinn A.L., Wiegand E.M., Jeddeloh J.A. Burkholderia pseudomallei kills the nematode Caenorhabditis elegans using an endotoxin-mediated paralysis. Cell Microbiol. 3:2001;381-393.
22. Shiokawa D., Tanuma S. DLAD, a novel mammalian divalent cation-independent endonuclease with homology to DNase II. Nucleic Acids Res. 27:1999;4083-4089.
23. Shiokawa D., Tanuma S.I. Isolation and characterization of the DLAD/Dlad genes, which lie head-to-head with the genes for urate oxidase. Biochem. Biophys. Res. Commun. 288:2001;1119-1128.
24. Soler L., Figueras M.J., Chacón M.R., Vila J., Marco F., Martinez-Murcia A.J., Guarro J. Potential virulence and antimicrobial susceptibility of Aeromonas popoffii recovered from freshwater and seawater. FEMS Immunol. Med. Microbiol. 32:2002;243-247.
25. Su X.Z., Prestwood A.K., McGraw R.A. Cloning and expression of complementary DNA encoding an antigen of Trichinella spiralis. Mol. Biochem. Parasitol. 45:1991;331-336.
26. Takeshita H., Yasuda T., Iida R., Nakajima T., Hosomi O., Nakashima Y., Mori S., Nomoto H., Kishi K. Identification of the three non-identical subunits constituting human deoxyribonuclease II. FEBS Letts. 440:1998;239-242.
27. Tanuma S., Shiokawa D. Cloning of a cDNA encoding a rat DNase II-like acid DNase. Biochem. Biophys. Res. Commun. 265:1999;395-399.
28. Torriglia A., Perani P., Brossas J.Y., Chaudun E., Treton J., Courtois Y., Counis M.F. L-DNase II, a molecule that links proteases and endonucleases in apoptosis, derives from the ubiquitous serpin leukocyte elastase inhibitor. Mol. Cell. Biol. 18:1998;3612-3619.
29. Vassilatis D.K., Despommier D., Misek D.E., Polvere R.I., Gold A.M., Van der Ploeg L.H. Analysis of a 43-kDa glycoprotein from the intracellular parasitic nematode Trichinella spiralis. J. Biol. Chem. 267:1992;18459-18465.
30. Wang C.C., Lu S.C., Chen H.L., Liao T.H. Porcine spleen deoxyribonuclease II. Covalent structure, cDNA sequence, molecular cloning, and gene expression. J. Biol. Chem. 273:1998;17192-17198.
31. Wu Y.C., Stanfield G.M., Horvitz H.R. NUC-1, a Caenorhabditis elegans DNase II homolog, functions in an intermediate step of DNA degradation during apoptosis. Genes Dev. 14:2000;536-548.
32. Yasuda T., Nadano D., Sawazaki K., Kishi K. Genetic polymorphism of human deoxyribonuclease II (DNase II): low activity levels in urine and leukocytes are due to an autosomal recessive allele. Ann. Hum. Genet. 56:1992;1-10.