-
1
-
-
0033642487
-
Algorithms for inferring qualitative models of biological networks
-
Akutsu T., Miyano S., Kuhara S. Algorithms for inferring qualitative models of biological networks. Pac. Symp. Biocomput. 5:2000;290-301.
-
(2000)
Pac. Symp. Biocomput.
, vol.5
, pp. 290-301
-
-
Akutsu, T.1
Miyano, S.2
Kuhara, S.3
-
2
-
-
0033536012
-
Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays
-
Alon U., Barkai N., Notterman D.A., Gish G., Ybarra S., Mack D., Levine A.J. Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays. Proc. Natl. Acad. Sci. USA. 96:1999;6745-6750.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 6745-6750
-
-
Alon, U.1
Barkai, N.2
Notterman, D.A.3
Gish, G.4
Ybarra, S.5
Mack, D.6
Levine, A.J.7
-
3
-
-
0034730140
-
Singular value decomposition for genome-wide expression data processing and modeling
-
Alter O., Brown P.O., Botstein D. Singular value decomposition for genome-wide expression data processing and modeling. Proc. Natl. Acad. Sci. USA. 97:2000;10101-10106.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 10101-10106
-
-
Alter, O.1
Brown, P.O.2
Botstein, D.3
-
6
-
-
0001789769
-
Modeling gene expression with differential equations
-
Chen T., He H.L., Church G.M. Modeling gene expression with differential equations. Pac. Symp. Biocomput. 4:1999;17-28.
-
(1999)
Pac. Symp. Biocomput.
, vol.4
, pp. 17-28
-
-
Chen, T.1
He, H.L.2
Church, G.M.3
-
7
-
-
0030669030
-
Exploring the metabolic genetic control of gene expression on a genomic scale
-
DeRisi J., Iyer V., Brown P. Exploring the metabolic genetic control of gene expression on a genomic scale. Science. 278:1997;680-686.
-
(1997)
Science
, vol.278
, pp. 680-686
-
-
DeRisi, J.1
Iyer, V.2
Brown, P.3
-
11
-
-
0033637153
-
Genomic expression programs in the response of yeast cells to environmental changes
-
Gasch A.P., Spellman P.T., Kao C.M., Carmel-Harel O., Eisen M.B., Storz G., Botstein D., Brown P.O. Genomic expression programs in the response of yeast cells to environmental changes. Mol. Biol. Cell. 11:2000;4241-4257.
-
(2000)
Mol. Biol. Cell
, vol.11
, pp. 4241-4257
-
-
Gasch, A.P.1
Spellman, P.T.2
Kao, C.M.3
Carmel-Harel, O.4
Eisen, M.B.5
Storz, G.6
Botstein, D.7
Brown, P.O.8
-
13
-
-
0036366689
-
Combining location and expression data for principled discovery of genetic regulatory network models
-
A.J. Hartemink, D.K. Gifford, T.S. Jaakkola, R.A. Young, Combining location and expression data for principled discovery of genetic regulatory network models, Pac. Symp. Biocomput. 7 (2002) 437-449.
-
(2002)
Pac. Symp. Biocomput.
, vol.7
, pp. 437-449
-
-
Hartemink, A.J.1
Gifford, D.K.2
Jaakkola, T.S.3
Young, R.A.4
-
14
-
-
12244275405
-
ASIAN - Automatic system for inferring a network from gene expression profiles
-
in press
-
K. Horimoto, S. Aburatani, S. Kuhara, H. Toh, ASIAN - automatic system for inferring a network from gene expression profiles, Res. Commun. Biochem. Cell Mol. Biol. (2003), in press.
-
(2003)
Res. Commun. Biochem. Cell Mol. Biol.
-
-
Horimoto, K.1
Aburatani, S.2
Kuhara, S.3
Toh, H.4
-
15
-
-
0036138509
-
Statistical estimation of cluster boundaries in gene expression profile data
-
Horimoto K., Toh H. Statistical estimation of cluster boundaries in gene expression profile data. Bioinformatics. 17:2001;1143-1151.
-
(2001)
Bioinformatics
, vol.17
, pp. 1143-1151
-
-
Horimoto, K.1
Toh, H.2
-
16
-
-
10544256600
-
DNA expression monitoring by hybridization to high density oligonucleotide arrays
-
Lockhart D.J., Dong H., Byrne M.C., Follettie M.T., Gallo M.V., Chee M.S., Mittmann M., Wang C., Kobayashi M., Horton H., Brown E.L. DNA expression monitoring by hybridization to high density oligonucleotide arrays. Nat. Biotechnol. 14:1996;1657-1680.
-
(1996)
Nat. Biotechnol.
, vol.14
, pp. 1657-1680
-
-
Lockhart, D.J.1
Dong, H.2
Byrne, M.C.3
Follettie, M.T.4
Gallo, M.V.5
Chee, M.S.6
Mittmann, M.7
Wang, C.8
Kobayashi, M.9
Horton, H.10
Brown, E.L.11
-
17
-
-
0033983822
-
MIPS: A database for genomes and protein sequences
-
Mewes H.W., Frishman D., Gruber C., Geier B., Haase D., Kaps A., Lemcke K., Mannhaupt G., Pfeiffer F., Schuller C.et al. MIPS. a database for genomes and protein sequences Nucl. Acids Res. 28:2000;37-40.
-
(2000)
Nucl. Acids Res.
, vol.28
, pp. 37-40
-
-
Mewes, H.W.1
Frishman, D.2
Gruber, C.3
Geier, B.4
Haase, D.5
Kaps, A.6
Lemcke, K.7
Mannhaupt, G.8
Pfeiffer, F.9
Schuller, C.10
-
18
-
-
0035237805
-
Rich probabilistic models for gene expression
-
Segal E., Taskar B., Gasch A., Friedman N., Koller D. Rich probabilistic models for gene expression. Bioinformatics. 17:2001;S243-S252.
-
(2001)
Bioinformatics
, vol.17
-
-
Segal, E.1
Taskar, B.2
Gasch, A.3
Friedman, N.4
Koller, D.5
-
19
-
-
0029812283
-
A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization
-
Shalon D., Smith S.J., Brown P.O. A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization. Genome Res. 6:1996;639-645.
-
(1996)
Genome Res.
, vol.6
, pp. 639-645
-
-
Shalon, D.1
Smith, S.J.2
Brown, P.O.3
-
20
-
-
0002054202
-
Modeling the complexity of genetic networks: Understanding multigene and pleiotropic regulation
-
Somogyi R., Shiegoski C.A. Modeling the complexity of genetic networks. understanding multigene and pleiotropic regulation Complexity. 1:1996;45-63.
-
(1996)
Complexity
, vol.1
, pp. 45-63
-
-
Somogyi, R.1
Shiegoski, C.A.2
-
21
-
-
0033027794
-
Interpreting patterns of gene expression with self-organizing maps: Methods and application to hematopoietic differentiation
-
Tamayo P., Slonim D., Mesirov J., Zhu Q., Kitareewan S., Dmitrovsky E., Lander E.S., Golub T.R. Interpreting patterns of gene expression with self-organizing maps. methods and application to hematopoietic differentiation Proc. Natl. Acad. Sci. USA. 96:1999;2907-2912.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 2907-2912
-
-
Tamayo, P.1
Slonim, D.2
Mesirov, J.3
Zhu, Q.4
Kitareewan, S.5
Dmitrovsky, E.6
Lander, E.S.7
Golub, T.R.8
-
22
-
-
0033028596
-
Systematic determination of genetic network architecture
-
Tavazoie S., Hughes J.D., Campbell M.J., Cho R.J., Church G.M. Systematic determination of genetic network architecture. Nat. Genet. 22:1999;281-285.
-
(1999)
Nat. Genet.
, vol.22
, pp. 281-285
-
-
Tavazoie, S.1
Hughes, J.D.2
Campbell, M.J.3
Cho, R.J.4
Church, G.M.5
-
23
-
-
0036191190
-
Inference of a genetic network by a combined approach of cluster analysis and graphical Gaussian modeling
-
Toh H., Horimoto K. Inference of a genetic network by a combined approach of cluster analysis and graphical Gaussian modeling. Bioinformatics. 18:2002;287-297.
-
(2002)
Bioinformatics
, vol.18
, pp. 287-297
-
-
Toh, H.1
Horimoto, K.2
-
24
-
-
0036035791
-
System for automatically inferring a genetic network from expression profiles
-
H. Toh, K. Horimoto, System for automatically inferring a genetic network from expression profiles, J. Biol. Phys. 28 (2002) 449-464.
-
(2002)
J. Biol. Phys.
, vol.28
, pp. 449-464
-
-
Toh, H.1
Horimoto, K.2
-
25
-
-
0034566082
-
Mining for putative regulatory elements in the yeast genome using gene expression data
-
AAAI Press, Menlo Park
-
J. Vilo, A. Brazma, I. Jonassen, A. Robinson, E. Ukkonen, Mining for putative regulatory elements in the yeast genome using gene expression data, in: Proceedings of Eighth International Conference on Intelligent Systems for Molecular Biology, AAAI Press, Menlo Park, 2000, pp. 384-394.
-
(2000)
Proceedings of Eighth International Conference on Intelligent Systems for Molecular Biology
, pp. 384-394
-
-
Vilo, J.1
Brazma, A.2
Jonassen, I.3
Robinson, A.4
Ukkonen, E.5
|