메뉴 건너뛰기




Volumn 142, Issue 1, 2003, Pages 98-107

RNA crystallization

Author keywords

[No Author keywords available]

Indexed keywords

ALKALINE PHOSPHATASE; BUFFER; CATION; DIVALENT CATION; MONOVALENT CATION; POLYAMINE; RNA;

EID: 0037394662     PISSN: 10478477     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1047-8477(03)00042-X     Document Type: Article
Times cited : (25)

References (39)
  • 1
    • 0030596508 scopus 로고    scopus 로고
    • Sequence variation as a strategy for crystallizing RNA motifs
    • Anderson A.C., Earp B.E., Frederick C.A. Sequence variation as a strategy for crystallizing RNA motifs. J. Mol. Biol. 259:1996;696-703.
    • (1996) J. Mol. Biol. , vol.259 , pp. 696-703
    • Anderson, A.C.1    Earp, B.E.2    Frederick, C.A.3
  • 5
    • 0033578939 scopus 로고    scopus 로고
    • The two faces of the Escherichia coli 23 S rRNA sarcin/ricin domain: The structure at 1.11 Å resolution
    • Correll C.C., Wool I.G., Munishkin A. The two faces of the Escherichia coli 23 S rRNA sarcin/ricin domain: the structure at 1.11 Å resolution. J. Mol. Biol. 292:1999;275-287.
    • (1999) J. Mol. Biol. , vol.292 , pp. 275-287
    • Correll, C.C.1    Wool, I.G.2    Munishkin, A.3
  • 6
  • 8
    • 0025074907 scopus 로고
    • In vitro selection of RNA molecules that bind specific ligands
    • Ellington A.D., Szostak J.W. In vitro selection of RNA molecules that bind specific ligands. Nature. 346:1990;818-822.
    • (1990) Nature , vol.346 , pp. 818-822
    • Ellington, A.D.1    Szostak, J.W.2
  • 9
    • 0022335486 scopus 로고
    • Nucleation and growth of protein crystals: General principles and assays
    • Feher G., Kam Z. Nucleation and growth of protein crystals: general principles and assays. Methods Enzymol. 114:1985;77-112.
    • (1985) Methods Enzymol. , vol.114 , pp. 77-112
    • Feher, G.1    Kam, Z.2
  • 10
    • 0034695419 scopus 로고    scopus 로고
    • Crystallization and structure determination of a hepatitis delta virus ribozyme: Use of the RNA-binding protein U1A as a crystallization module
    • Ferre-D'Amare A.R., Doudna J.A. Crystallization and structure determination of a hepatitis delta virus ribozyme: use of the RNA-binding protein U1A as a crystallization module. J. Mol. Biol. 295:2000;541-556.
    • (2000) J. Mol. Biol. , vol.295 , pp. 541-556
    • Ferre-D'Amare, A.R.1    Doudna, J.A.2
  • 11
    • 0021293674 scopus 로고
    • Protein crystallization: The growth of large-scale single crystals
    • Gilliland G.L., Davies D.R. Protein crystallization: the growth of large-scale single crystals. Methods Enzymol. 104:1984;370-381.
    • (1984) Methods Enzymol. , vol.104 , pp. 370-381
    • Gilliland, G.L.1    Davies, D.R.2
  • 12
    • 0031213875 scopus 로고    scopus 로고
    • Crystals by design: A strategy for crystallization of a ribozyme derived from the Tetrahymena group I intron
    • Golden B.L., Podell E.R., Gooding A.R., Cech T.R. Crystals by design: a strategy for crystallization of a ribozyme derived from the Tetrahymena group I intron. J. Mol. Biol. 270:1997;711-723.
    • (1997) J. Mol. Biol. , vol.270 , pp. 711-723
    • Golden, B.L.1    Podell, E.R.2    Gooding, A.R.3    Cech, T.R.4
  • 14
    • 0021013526 scopus 로고
    • The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme
    • Guerrier-Takada C., Gardiner K., Marsh T., Pace N., Altman S. The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme. Cell. 35:1983;849-857.
    • (1983) Cell , vol.35 , pp. 849-857
    • Guerrier-Takada, C.1    Gardiner, K.2    Marsh, T.3    Pace, N.4    Altman, S.5
  • 15
    • 0032827799 scopus 로고    scopus 로고
    • ′ terminus of RNAs transcribed by T7 RNA polymerase
    • ′ terminus of RNAs transcribed by T7 RNA polymerase RNA. 5:1999;1268-1272.
    • (1999) RNA , vol.5 , pp. 1268-1272
    • Kao, C.1    Zheng, M.2    Rudisser, S.3
  • 17
    • 0020417286 scopus 로고
    • Self-splicing RNA: Autoexcision and autocyclization of the ribosomal RNA intervening sequence of Tetrahymena
    • Kruger K., Grabowski P.J., Zaug A.J., Sands J., Gottschling D.E., Cech T.R. Self-splicing RNA: autoexcision and autocyclization of the ribosomal RNA intervening sequence of Tetrahymena. Cell. 31:1982;147-157.
    • (1982) Cell , vol.31 , pp. 147-157
    • Kruger, K.1    Grabowski, P.J.2    Zaug, A.J.3    Sands, J.4    Gottschling, D.E.5    Cech, T.R.6
  • 19
    • 0031045476 scopus 로고    scopus 로고
    • The preparation and crystallization of RNA: A sparse matrix approach
    • Kundrot C.E. The preparation and crystallization of RNA: a sparse matrix approach. Methods Enzymol. 276:1997;143-157.
    • (1997) Methods Enzymol. , vol.276 , pp. 143-157
    • Kundrot, C.E.1
  • 20
    • 0022321627 scopus 로고
    • Crystallization of macromolecules: General principles
    • McPherson A. Crystallization of macromolecules: general principles. Methods Enzymol. 114:1985;112-120.
    • (1985) Methods Enzymol. , vol.114 , pp. 112-120
    • McPherson, A.1
  • 22
    • 0023651444 scopus 로고
    • Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates
    • Milligan J.F., Groebe D.R., Witherell G.W., Uhlenbeck O.C. Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates. Nucleic Acids Res. 15:1987;8783-8798.
    • (1987) Nucleic Acids Res. , vol.15 , pp. 8783-8798
    • Milligan, J.F.1    Groebe, D.R.2    Witherell, G.W.3    Uhlenbeck, O.C.4
  • 23
    • 0024819449 scopus 로고
    • Synthesis of small RNAs using T7 RNA polymerase
    • Milligan J.F., Uhlenbeck O.C. Synthesis of small RNAs using T7 RNA polymerase. Methods Enzymol. 180:1989;51-62.
    • (1989) Methods Enzymol. , vol.180 , pp. 51-62
    • Milligan, J.F.1    Uhlenbeck, O.C.2
  • 25
    • 0027985820 scopus 로고
    • Coaxially stacked RNA helices in the catalytic center of the Tetrahymena ribozyme
    • Murphy F.L., Wang Y.H., Griffith J.D., Cech T.R. Coaxially stacked RNA helices in the catalytic center of the Tetrahymena ribozyme. Science. 265:1994;1709-1712.
    • (1994) Science , vol.265 , pp. 1709-1712
    • Murphy, F.L.1    Wang, Y.H.2    Griffith, J.D.3    Cech, T.R.4
  • 26
    • 0006021423 scopus 로고
    • Total chemical synthesis of a 77-nucleotide-long RNA sequence having methionine-acceptance activity
    • Ogilvie K.K., Usman N., Nicoghosian K., Cedergren R.J. Total chemical synthesis of a 77-nucleotide-long RNA sequence having methionine-acceptance activity. Proc. Natl. Acad. Sci. USA. 85:1988;5764-5768.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 5764-5768
    • Ogilvie, K.K.1    Usman, N.2    Nicoghosian, K.3    Cedergren, R.J.4
  • 27
    • 0025255113 scopus 로고
    • Protein crystallization
    • Ollis D., White S. Protein crystallization. Methods Enzymol. 182:1990;646-659.
    • (1990) Methods Enzymol. , vol.182 , pp. 646-659
    • Ollis, D.1    White, S.2
  • 28
    • 0028037302 scopus 로고
    • Model for an RNA tertiary interaction from the structure of an intermolecular complex between a GAAA tetraloop and an RNA helix
    • Pley H.W., Flaherty K.M., McKay D.B. Model for an RNA tertiary interaction from the structure of an intermolecular complex between a GAAA tetraloop and an RNA helix. Nature. 372:1994;111-113.
    • (1994) Nature , vol.372 , pp. 111-113
    • Pley, H.W.1    Flaherty, K.M.2    McKay, D.B.3
  • 29
    • 0028063567 scopus 로고
    • Three-dimensional structure of a hammerhead ribozyme
    • [See comments]
    • Pley H.W., Flaherty K.M., McKay D.B. Three-dimensional structure of a hammerhead ribozyme. Nature. 372:1994;68-74. [See comments].
    • (1994) Nature , vol.372 , pp. 68-74
    • Pley, H.W.1    Flaherty, K.M.2    McKay, D.B.3
  • 30
    • 0029020003 scopus 로고
    • Crystallization of RNA-protein complexes. I. Methods for the large-scale preparation of RNA suitable for crystallographic studies
    • Price S.R., Ito N., Oubridge C., Avis J.M., Nagai K. Crystallization of RNA-protein complexes. I. Methods for the large-scale preparation of RNA suitable for crystallographic studies. J. Mol. Biol. 249:1995;398-408.
    • (1995) J. Mol. Biol. , vol.249 , pp. 398-408
    • Price, S.R.1    Ito, N.2    Oubridge, C.3    Avis, J.M.4    Nagai, K.5
  • 33
    • 0023953676 scopus 로고
    • Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro
    • Sampson J.R., Uhlenbeck O.C. Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro. Proc. Natl. Acad. Sci. USA. 85:1988;1033-1037.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 1033-1037
    • Sampson, J.R.1    Uhlenbeck, O.C.2
  • 34
    • 0026562625 scopus 로고
    • Context dependence of hydrogen bond free energy revealed by substitutions in an RNA hairpin
    • SantaLucia J.J., Kierzek R., Turner D.H. Context dependence of hydrogen bond free energy revealed by substitutions in an RNA hairpin. Science. 256:1992;217-219.
    • (1992) Science , vol.256 , pp. 217-219
    • SantaLucia, J.J.1    Kierzek, R.2    Turner, D.H.3
  • 35
    • 0029115376 scopus 로고
    • Rapid crystallization of chemically synthesized hammerhead RNAs using a double screening procedure
    • Scott W.G., Finch J.T., Grenfell R., Fogg J., Smith T., Gait M.J., Klug A. Rapid crystallization of chemically synthesized hammerhead RNAs using a double screening procedure. J. Mol. Biol. 250:1995;327-332.
    • (1995) J. Mol. Biol. , vol.250 , pp. 327-332
    • Scott, W.G.1    Finch, J.T.2    Grenfell, R.3    Fogg, J.4    Smith, T.5    Gait, M.J.6    Klug, A.7
  • 36
    • 0032855035 scopus 로고    scopus 로고
    • High-performance liquid chromatography purification of homogenous-length RNA produced by trans cleavage with a hammerhead ribozyme
    • Shields T.P., Mollova E., Ste Marie L., Hansen M.R., Pardi A. High-performance liquid chromatography purification of homogenous-length RNA produced by trans cleavage with a hammerhead ribozyme. RNA. 5:1999;1259-1267.
    • (1999) RNA , vol.5 , pp. 1259-1267
    • Shields, T.P.1    Mollova, E.2    Ste Marie, L.3    Hansen, M.R.4    Pardi, A.5
  • 37
    • 0026076822 scopus 로고
    • Construction of a novel RNA-transcript-trimming plasmid which can be used both in vitro in place of run-off and (G)-free transcriptions and in vivo as multi-sequences transcription vectors
    • Taira K., Nakagawa K., Nishikawa S., Furukawa K. Construction of a novel RNA-transcript-trimming plasmid which can be used both in vitro in place of run-off and (G)-free transcriptions and in vivo as multi-sequences transcription vectors. Nucleic Acids Res. 19:1991;5125-5130.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 5125-5130
    • Taira, K.1    Nakagawa, K.2    Nishikawa, S.3    Furukawa, K.4
  • 38
    • 0025194307 scopus 로고
    • Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase
    • Tuerk C., Gold L. Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase. Science. 249:1990;505-510.
    • (1990) Science , vol.249 , pp. 505-510
    • Tuerk, C.1    Gold, L.2
  • 39
    • 0002565045 scopus 로고
    • Chemical synthesis, analysis, and purification of oligoribonucleotides
    • Vinayak R. Chemical synthesis, analysis, and purification of oligoribonucleotides. Methods: Companion Methods Enzymol. 5:1993;7-18.
    • (1993) Methods: Companion Methods Enzymol. , vol.5 , pp. 7-18
    • Vinayak, R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.