-
1
-
-
0030834869
-
Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model
-
ACM Press, New York
-
R. Agarwala, S. Batzoglou, V. Dančk, S. Decatur, M. Farach, S. Hannenhalli, S. Muthukrishnan, S. Skiena, Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model, in: Proceedings of the Eighth Symposium on Discrete Algorithms, ACM Press, New York, 1997, pp. 390-399.
-
(1997)
Proceedings of the Eighth Symposium on Discrete Algorithms
, pp. 390-399
-
-
R. Agarwala1
-
2
-
-
0030717821
-
Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model
-
ACM Press, New York
-
R. Agarwala, S. Batzoglou, V. Dančk, S. Decatur, M. Farach, S. Hannenhalli, S. Muthukrishnan, S. Skiena, Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model, in: Proceedings of the First Conference on Computational Molecular Biology, ACM Press, New York, 1997, pp. 1-2.
-
(1997)
Proceedings of the First Conference on Computational Molecular Biology
, pp. 1-2
-
-
R. Agarwala1
-
3
-
-
0012363098
-
On the intractability of protein folding wit a finite alphabet of amino acids
-
J. Atkins, and W.E. Hart On the intractability of protein folding wit a finite alphabet of amino acids Algorithmics 25 1999 279 294
-
(1999)
Algorithmics
, vol.25
, pp. 279-294
-
-
Atkins, J.1
Hart, W.E.2
-
4
-
-
0031685674
-
Protein folding in the hydrophobic-hydrophilic (HP) model is NP complete
-
ACM Press, New York
-
B. Berger, F.T. Leighton, Protein folding in the hydrophobic-hydrophilic (HP) model is NP -complete, in: Proceedings of the Second Conference on Computational Molecular Biology, ACM Press, New York, 1998, pp. 30-39.
-
(1998)
Proceedings of the Second Conference on Computational Molecular Biology
, pp. 30-39
-
-
Berger, B.1
Leighton, F.T.2
-
5
-
-
0025150383
-
Origins of structure in globular proteins
-
H.S. Chan, and K.A. Dill Origins of structure in globular proteins Proc. Nat. Acad. Sci. USA 87 1990 6388 6392
-
(1990)
Proc. Nat. Acad. Sci. USA
, vol.87
, pp. 6388-6392
-
-
Chan, H.S.1
Dill, K.A.2
-
6
-
-
0031645683
-
On the complexity of protein folding
-
ACM Press, New York
-
P. Crescenzi, D. Goldman, C. Papadimitriou, A. Piccolboni, M. Yannakakis, On the complexity of protein folding, in: Proceedings of the 30th Symposium on Theory of Computing, ACM Press, New York, 1998, pp. 597-603.
-
(1998)
Proceedings of the 30th Symposium on Theory of Computing
, pp. 597-603
-
-
Crescenzi, P.1
Goldman, D.2
Papadimitriou, C.3
Piccolboni, A.4
Yannakakis, M.5
-
7
-
-
0031680076
-
On the complexity of protein folding
-
ACM Press, New York
-
P. Crescenzi, D. Goldman, C. Papadimitriou, A. Piccolboni, M. Yannakakis, On the complexity of protein folding, in: Proceedings of the Second Conference on Computational Molecular Biology, ACM Press, New York, 1998, pp. 61-62.
-
(1998)
Proceedings of the Second Conference on Computational Molecular Biology
, pp. 61-62
-
-
Crescenzi, P.1
Goldman, D.2
Papadimitriou, C.3
Piccolboni, A.4
Yannakakis, M.5
-
8
-
-
0025370815
-
Dominant forces in protein folding
-
K.A. Dill Dominant forces in protein folding Biochemistry 29 31 1990 7133 7155
-
(1990)
Biochemistry
, vol.29
, Issue.31
, pp. 7133-7155
-
-
Dill, K.A.1
-
9
-
-
0028929556
-
Principles of protein folding a perspective from simple exact models
-
K.A. Dill, S. Bromberg, K. Yue, K.M. Fiebig, D. Yee, P. Thomas, and H. Chan Principles of protein folding a perspective from simple exact models Prot. Sci. 4 1995 561 602
-
(1995)
Prot. Sci.
, vol.4
, pp. 561-602
-
-
Dill, K.A.1
Bromberg, S.2
Yue, K.3
Fiebig, K.M.4
Yee, D.5
Thomas, P.6
Chan, H.7
-
10
-
-
0027692037
-
Complexity of protein folding
-
A. Fraenkel Complexity of protein folding Bull. Math. Biol. 55 6 1993 1199 1210
-
(1993)
Bull. Math. Biol.
, vol.55
, Issue.6
, pp. 1199-1210
-
-
Fraenkel, A.1
-
11
-
-
0041674538
-
Fast protein folding in the hydrophobic-hydrophilic model within three-eights of optimal
-
ACM Press, New York
-
W.E. Hart, S. Istrail, Fast protein folding in the hydrophobic- hydrophilic model within three-eights of optimal, in: Proceedings of the 27th Symposium on Theory of Computing, ACM Press, New York, 1995, pp. 157-167.
-
(1995)
Proceedings of the 27th Symposium on Theory of Computing
, pp. 157-167
-
-
Hart, W.E.1
Istrail, S.2
-
12
-
-
0030015087
-
Fast protein folding in the hydrophobic-hydrophilic model within three-eights of optimal
-
W.E. Hart, and S. Istrail Fast protein folding in the hydrophobic-hydrophilic model within three-eights of optimal J. Comp. Biol. 3 1 1996 53 96
-
(1996)
J. Comp. Biol.
, vol.3
, Issue.1
, pp. 53-96
-
-
Hart, W.E.1
Istrail, S.2
-
13
-
-
0030676747
-
Lattice and off-lattice side chain models of protein folding: Linear time structure prediction better than 86% of optimal
-
ACM Press, New York
-
W.E. Hart, S. Istrail, Lattice and off-lattice side chain models of protein folding: linear time structure prediction better than 86% of optimal, in: Proceedings of the Second Conference on Computational Molecular Biology, ACM Press, New York, 1997, pp. 137-146.
-
(1997)
Proceedings of the Second Conference on Computational Molecular Biology
, pp. 137-146
-
-
Hart, W.E.1
Istrail, S.2
-
14
-
-
0032266010
-
Spatial codes and the hardness of string folding problems
-
ACM Press, New York
-
A. Nayak, A. Sinclair, U. Zwick, Spatial codes and the hardness of string folding problems, in: Proceedings of the Ninth Symposium on Discrete Algorithms, ACM Press, New York, 1998, pp. 639-648.
-
(1998)
Proceedings of the Ninth Symposium on Discrete Algorithms
, pp. 639-648
-
-
Nayak, A.1
Sinclair, A.2
Zwick, U.3
-
15
-
-
0026776874
-
Computational complexity of a problem in molecular structure prediction
-
J.T. Ngo, and J. Marks Computational complexity of a problem in molecular structure prediction Prot. Eng. 5 4 1992 313 321
-
(1992)
Prot. Eng.
, vol.5
, Issue.4
, pp. 313-321
-
-
Ngo, J.T.1
Marks, J.2
-
16
-
-
0010034026
-
Computational complexity, protein structure prediction, and the Levinthal paradox
-
K. Merz Jr. S. LeGrand, Birkhäuser Basel
-
J.T. Ngo, J. Marks, and M. Karplus Computational complexity, protein structure prediction, and the Levinthal paradox K. Merz Jr. S. LeGrand, The Protein Folding Problem and Tertiary Structure Prediction 1994 Birkhäuser Basel
-
(1994)
The Protein Folding Problem and Tertiary Structure Prediction
-
-
Ngo, J.T.1
Marks, J.2
Karplus, M.3
-
17
-
-
84947715010
-
On the complexity of string folding
-
F. Mayer auf der Heide, B. Monien, Lecture Notes in Computer Science Springer Berlin
-
M. Paterson, and T. Przytycka On the complexity of string folding F. Mayer auf der Heide, B. Monien, Proceedings of the 23rd International Colloquium on Automata, Languages, and Programming Lecture Notes in Computer Science Vol. 1099 1996 Springer Berlin 658 669
-
(1996)
Proceedings of the 23rd International Colloquium on Automata, Languages, and Programming
, vol.1099
, pp. 658-669
-
-
Paterson, M.1
Przytycka, T.2
-
18
-
-
0029554952
-
Designing amino acid sequences to fold with good hydrophobic cores
-
S. Sun, R. Brem, H.D. Chan, and K.A. Dill Designing amino acid sequences to fold with good hydrophobic cores Prot. Eng. 8 12 1995 1205 1213
-
(1995)
Prot. Eng.
, vol.8
, Issue.12
, pp. 1205-1213
-
-
Sun, S.1
Brem, R.2
Chan, H.D.3
Dill, K.A.4
-
19
-
-
0027690211
-
Finding the lowest free energy conformation of a protein is an NP -hard problem proof and implications
-
R. Unger, and J. Moult Finding the lowest free energy conformation of a protein is an NP -hard problem proof and implications Bull. Math. Biol. 55 6 1993 1183 1198
-
(1993)
Bull. Math. Biol.
, vol.55
, Issue.6
, pp. 1183-1198
-
-
Unger, R.1
Moult, J.2
-
21
-
-
84863765894
-
-
Release 36 (July 1998)
-
Release 36 (July 1998): ftp://www.expasy.ch/databases/swiss-prot/sw-old- releases/sprot36.tar.gz.
-
-
-
-
22
-
-
84863761740
-
-
Release 39 (June 2000)
-
Release 39 (June 2000): ftp://www.expasy.ch/databases/swiss-prot/sw-old- releases/sprot39.tar.gz.
-
-
-
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