Molecular cloning of endo-β-D-1,4-glucanase genes, rce1, rce2, and rce3, from Rhizopus oryzae

Journal of Bacteriology

Volumn 185, Issue 5, 2003, Pages 1749-1756

  Moriya, Tatsuki ^a   Murashima, Koichiro ^a   Nakane, Akitaka ^a   Yanai, Koji ^a   Sumida, Naomi ^a   Koga, Jinichiro ^a   Murakami, Takeshi ^a   Kono, Toshiaki ^a  

^a MEIJI SEIKA KAISHA LTD   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIOPHAGE DNA; CELLULASE; CELLULOSE; DNA FRAGMENT; FUNGAL ENZYME; GENOMIC DNA;

AMINO ACID SEQUENCE; ARTICLE; FUNGAL GENE; GENE EXPRESSION; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RCE1 GENE; RCE2 GENE; RCE3 GENE; RHIZOPUS; SACCHAROMYCES CEREVISIAE;

AMINO ACID SEQUENCE; BASE SEQUENCE; BINDING SITES; CATALYTIC DOMAIN; CELLULASE; CLONING, MOLECULAR; FUNGAL PROTEINS; GLYCOSYLATION; MOLECULAR SEQUENCE DATA; PROTEIN STRUCTURE, TERTIARY; RECOMBINANT PROTEINS; RHIZOPUS; SACCHAROMYCES CEREVISIAE; SEQUENCE HOMOLOGY, AMINO ACID;

RHIZOPUS; RHIZOPUS ORYZAE; SACCHAROMYCES; SACCHAROMYCES CEREVISIAE; ZYGOMYCOTA;

EID: 0037373344     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.185.5.1749-1756.2003     Document Type: Article

References (28)

1. Black, G. W., G. P. Hazlewood, G. P. Xue, C. G. Orpin, and H. J. Gilbert. 1994. Xylanase B from Neocallimastix patriciarum contains a non-catalytic 455-residue linker sequence comprised of 57 repeats of an octapeptide. Biochem. J. 299:381-387.
2. Chow, C. M., E. Yague, S. Raguz, D. A. Wood, and C. F. Thurston. 1994. The cel3 gene of Agaricus bisporus codes for a modular cellulase and is transcriptionally regulated by the carbon source. Appl. Environ. Microbiol. 60:2779-2785.
3. Dalboege, H., B. Diderichsen, T. Sandal, and S. Kauppinen. November 1997. Method of providing novel DNA sequence. World patent 9743409.
4. Davies, G. J., G. G. Dodson, R. E. Hubbard, S. P. Tolley, Z. Dauter, K. S. Wilson, C. Hjort, J. M. Mikkelsen, G. Rasmussen, and M. Shulein. 1993. Structure and function of endoglucanase V. Nature 365:362-364.
5. Doi, R. H., J. S. Park, C. C. Liu, L. M. Malburg, Y. Tamaru, A. Ichiishi, and A. Ibrahim. 1998. Cellulosome and noncellulosomal cellulases of Clostridium cellulovorans. Extremophiles 2:53-60.
6. Gilbert, H. J., J. Hall, G. P. Hazlewood, and L. M. Ferreira. 1990. The N-terminal region of an endoglucanase from Pseudomonas fluorescens subspecies cellulosa constitutes a cellulose-binding domain that is distinct from the catalytic centre. Mol. Microbiol. 4:759-767.
7. Henrissat, B., and A. Bairoch. 1993. New families in the classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem. J. 293:781-788.
8. Henrissat, B., and A. Bairoch. 1996. Updating the sequence-based classification of glycosyl hydrolases. Biochem. J. 316:695-696.
9. Henrissat, B., H. Driguez, C. Viet, and M. Schulein. 1985. Synergism of cellulases from Trichoderma reesei in the degradation of cellulose. Bio/Technology 3:722-726.
10. Himmel, M. E., M. F. Ruth, and C. E. Wyman. 1999. Cellulase for commodity products from cellulosic biomass. Curr. Opin. Biotechnol. 10:358-364.
11. Inoue, T., K. Murashima, J. I. Azuma, A. Sugimoto, and M. Slaytor. 1997. Cellulose and xylan utilization in the lower termite Reticulitermes speratus. J. Insect Physiol. 43:235-242.
12. Ito, H., Y. Fukuda, K. Murata, and A. Kimura. 1983. Transformation of intact yeast cells treated with alkali cations. J. Bacteriol. 153:163-168.
13. Ljungdahl, L. G., X.-L. Li, and H. Chen. 1998. Evidence in anaerobic fungi of transfer of genes between them from aerobic fungi, bacteria and animal hosts, p. 187-197. In J. Wiegel and W. W. Adams (ed.), Thermophiles: the keys to molecular evolution and the origin of life? Taylor and Francis Inc., Philadelphia, Pa.
14. Murashima, K., T. Nishimura, Y. Nakamura, J. Koga, T. Moriya, N. Sumida, T. Yaguchi, and T. Kono. 2002. Purification and characterization of new endo-1,4-β-D-glucanases from Rhizopus oryzae. Enzyme Microb. Technol. 30:319-326.
15. Nakatani, F., T. Kawaguchi, G. Takada, J. I. Sumitani, Y. Moriyama, and M. Arai. 2000. Cloning and sequencing of an endoglucanase gene from Scopulariopsis brevicaulis TOF-1212, and its expression in Saccharomyces cerevisiae. Biosci. Biotechnol. Biochem. 64:1238-1246.
16. Ohmiya, Y., M. Samejima, M. Shiroishi, Y. Amano, T. Kanda, F. Sakai, and T. Hayashi. 2000. Evidence that endo-1,4-beta-glucanases act on cellulose in suspension-cultured poplar cells. Plant J. 24:147-158.
17. Schauwecker, F., G. Wanner, and R. Kahmann. 1995. Filament-specific expression of a cellulase gene in the dimorphic fungus Ustilago maydis. Biol. Chem. Hoppe-Seyler 376:617-625.
18. Schou, C., G. Rasmussen, M. B. Kaltoft, B. Henrissat, and M. Schulein. 1993. Stereochemistry, specificity and kinetics of the hydrolysis of reduced cellodextrins by nine cellulases. Eur. J. Biochem. 217:947-953.
19. Schulein, M., D. F. Tikhomirov, and C. Schou. 1993. Humicola insolens alkaline cellulases. Found. Biotech. Ind. Ferment. Res. Publ. 8:109-116.
20. Schwarz, W. H. 2001. The cellulosome and cellulose degradation by anaerobic bacteria. Appl. Microbiol. Biotechnol. 56:634-649.
21. Sheppard, P. O., F. J. Grant, P. J. Oort, C. A. Sprecher, D. C. Foster, F. S. Hagen, A. Upshall, G. L McKnight, and P. J. O'Hara. 1994. The use of conserved cellulase family-specific sequences to clone cellulase homologue cDNAs from Fusarium oxysporum. Gene 150:163-167.
22. Takashima, S., H. Iikura, A. Nakamura, M. Hidaka, H. Masaki, and T. Uozumi. 1999. Comparison of gene structures and enzymatic properties between two endoglucanases from Humicola grisea. J. Biotechnol. 67:85-97.
23. Teeri, T. T. 1997. Crystalline cellulose degradation: new insight into the function of cellobiohydrolases. Trends Biotechnol. 15:160-167.
24. Teeri, T. T., P. Lehtovaara, S. Kauppinen, I. Salovuori, and J. Knowles. 1987. Homologous domains in Trichoderma reesei cellulolytic enzymes: gene sequence and expression of cellobiohydrolase II. Gene 51:43-52.
25. Tomme, P., R. A. Warren, and N. R. Gilkes. 1995. Cellulose hydrolysis by bacteria and fungi. Adv. Microb. Physiol. 37:1-81.
26. Van Arsdell, J. N. 1987. Cloning, characterization, and expression in Saccharomyces cerevisiae of endoglucanase I from Trichoderma reesei. Bio/Technology 5:60-64.
27. Yanai, K., A. Nakane, A. Kawate, and M. Hirayama. 2001. Molecular cloning and characterization of the fructooligosaccharide-producing beta-fructofuranosidase gene from Aspergillus niger ATCC 20611. Biosci. Biotechnol. Biochem. 65:766-773.
28. Zhang, J. X., and H. J. Flint. 1992. A bifunctional xylanase encoded by the xynA gene of the rumen cellulolytic bacterium Ruminococcus/flavefaciens 17 comprises two dissimilar domains linked by an asparagine/glutamine-rich sequence. Mol. Microbiol. 6:1013-1023.