-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0028949375
-
Genomic Organization of the Klebsiella pneumoniae cps region responsible for serotype K2 capsular polysaccharide synthesis in the virulent strain Chedid
-
Arakawa, Y., R. Wacharotayankun, T. Nagatsuka, H. Ito, N. Kato, and M. Ohta. 1995. Genomic Organization of the Klebsiella pneumoniae cps region responsible for serotype K2 capsular polysaccharide synthesis in the virulent strain Chedid. J. Bacteriol. 177:1788-1796.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 1788-1796
-
-
Arakawa, Y.1
Wacharotayankun, R.2
Nagatsuka, T.3
Ito, H.4
Kato, N.5
Ohta, M.6
-
3
-
-
0024636539
-
Nucleotide sequence of IS492, a novel insertion sequence causing variation in extracellular polysaccharide production in the marine bacterium Pseudomonas atlantica
-
Bartlett, D. H., and M. Silverman. 1989. Nucleotide sequence of IS492, a novel insertion sequence causing variation in extracellular polysaccharide production in the marine bacterium Pseudomonas atlantica. J. Bacteriol. 171:1763-1766.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 1763-1766
-
-
Bartlett, D.H.1
Silverman, M.2
-
4
-
-
0028847868
-
Genesis of the novel epidemic Vibrio cholerae O139 strain: Evidence for horizontal transfer of genes involved in polysaccharide synthesis
-
Bik, E. M., A. E. Bunschoten, R. D. Gouw, and F. R. Mooi. 1995. Genesis of the novel epidemic Vibrio cholerae O139 strain: evidence for horizontal transfer of genes involved in polysaccharide synthesis. EMBO J. 14:209-216.
-
(1995)
EMBO J.
, vol.14
, pp. 209-216
-
-
Bik, E.M.1
Bunschoten, A.E.2
Gouw, R.D.3
Mooi, F.R.4
-
5
-
-
0018390582
-
Disease caused by a marine vibrio: Clinical characteristics and epidemiology
-
Blake, P. A., M. H. Merson, R. E. Weaver, D. G. Hollis, and P. C. Heublin. 1979. Disease caused by a marine vibrio: clinical characteristics and epidemiology. N. Engl. J. Med. 300:1-5.
-
(1979)
N. Engl. J. Med.
, vol.300
, pp. 1-5
-
-
Blake, P.A.1
Merson, M.H.2
Weaver, R.E.3
Hollis, D.G.4
Heublin, P.C.5
-
6
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner, F. R., G. Plunkett III, C. A. Block, N. T. Perna, et al. 1997. The complete genome sequence of Escherichia coli K-12. Science 277:1453-1474.
-
(1997)
Science
, vol.277
, pp. 1453-1474
-
-
Blattner, F.R.1
Plunkett G. III2
Block, C.A.3
Perna, N.T.4
-
7
-
-
0031214771
-
Classification of Vibrio vulnificus strains by the carbohydrate composition of their capsular polysaccharides
-
Bush, C. A., P. Patel, S. Gunawardena, J. Powell, A. Joseph, J. A. Johnson, and J. G. Morris. 1997. Classification of Vibrio vulnificus strains by the carbohydrate composition of their capsular polysaccharides. Anal. Biochem. 250:186-195.
-
(1997)
Anal. Biochem.
, vol.250
, pp. 186-195
-
-
Bush, C.A.1
Patel, P.2
Gunawardena, S.3
Powell, J.4
Joseph, A.5
Johnson, J.A.6
Morris, J.G.7
-
8
-
-
0028861722
-
Extraction of genomic DNA from extracellular polysaccharide-synthesizing gram-negative bacteria
-
Chan, J. W. Y. F., and P. H. Goodwin. 1995. Extraction of genomic DNA from extracellular polysaccharide-synthesizing gram-negative bacteria. BioTechniques 18:418-422.
-
(1995)
BioTechniques
, vol.18
, pp. 418-422
-
-
Chan, J.W.Y.F.1
Goodwin, P.H.2
-
9
-
-
0033753925
-
The Vibrio cholerae O1 chromosomal integron
-
Clark, C. A., L. Purins, P. Kaewrakon, T. Focareta, and P. A. Manning. 2000. The Vibrio cholerae O1 chromosomal integron. Genet. Mol. Biol. 146:2605-2612.
-
(2000)
Genet. Mol. Biol.
, vol.146
, pp. 2605-2612
-
-
Clark, C.A.1
Purins, L.2
Kaewrakon, P.3
Focareta, T.4
Manning, P.A.5
-
10
-
-
0034161321
-
NPS@: Network protein sequence analysis
-
Combet, C., C. Blanchet, C. Geourjon, ad G. Deleage. 2000. NPS@: network protein sequence analysis. Trends Biochem. Sci. 25:147-150.
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 147-150
-
-
Combet, C.1
Blanchet, C.2
Geourjon, C.3
Deleage, G.4
-
11
-
-
0033004266
-
Analysis of a capsular polysaccharide biosynthesis locus of Bacteroides fragilis
-
Comstock, L. E., M. J. Coyne, A. O. Tzianabos, A. Pantosti, A. B. Onderdonk, and D. L. Kasper. 1999. Analysis of a capsular polysaccharide biosynthesis locus of Bacteroides fragilis. Infect. Immun. 67:3525-3532.
-
(1999)
Infect. Immun.
, vol.67
, pp. 3525-3532
-
-
Comstock, L.E.1
Coyne, M.J.2
Tzianabos, A.O.3
Pantosti, A.4
Onderdonk, A.B.5
Kasper, D.L.6
-
12
-
-
0031754767
-
Structural and functional characterization of IS1358 from Vibrio cholerae
-
Dumontier, S., P. Trier-Cuot, and P. Berche. 1998. Structural and functional characterization of IS1358 from Vibrio cholerae. J. Bacteriol. 180:6101-6106.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 6101-6106
-
-
Dumontier, S.1
Trier-Cuot, P.2
Berche, P.3
-
13
-
-
0027318985
-
Nucleotide sequence encoding the mannose-ducose-resistant hemagglutinin of Vibrio cholerae O1 and construction of a mutant
-
Franzon, V. L., A. Barker, and P. A. Manning. 1993. Nucleotide sequence encoding the mannose-ducose-resistant hemagglutinin of Vibrio cholerae O1 and construction of a mutant. Infect. Immun. 61:3032-3037.
-
(1993)
Infect. Immun.
, vol.61
, pp. 3032-3037
-
-
Franzon, V.L.1
Barker, A.2
Manning, P.A.3
-
14
-
-
17144462135
-
DNA Sequence of both chromosomes of the cholera pathogen
-
Heidelberg, J. F., et al. 2000. DNA Sequence of both chromosomes of the cholera pathogen. Nature 406:477-483.
-
(2000)
Nature
, vol.406
, pp. 477-483
-
-
Heidelberg, J.F.1
-
15
-
-
0000207681
-
Tmbase-a database of membrane spanning proteins segments
-
Hofmann, K., and W. Stoffel. 1993. Tmbase-a database of membrane spanning proteins segments. Biol. Chem. Hoppe-Seyler. 374:166.
-
(1993)
Biol. Chem. Hoppe-Seyler.
, vol.374
, pp. 166
-
-
Hofmann, K.1
Stoffel, W.2
-
16
-
-
0002257543
-
Capsules of Escherichia coli
-
M. Sussman (ed.). Cambridge University Press, Cambridge, United Kingdom
-
Jann, B., and K. Jann. 1997. Capsules of Escherichia coli. In M. Sussman (ed.), Escherichia coli mechanisms of virulence, p. 113-143. Cambridge University Press, Cambridge, United Kingdom.
-
(1997)
Escherichia coli Mechanisms of Virulence
, pp. 113-143
-
-
Jann, B.1
Jann, K.2
-
17
-
-
0027987494
-
Sequence analysis and molecular characterization of genes required for the biosynthesis of type 1 capsular polysaccharide in Staphylococcus aureus
-
Lin, W. S., T. Cunneen, and C. Y. Lee. 1994. Sequence analysis and molecular characterization of genes required for the biosynthesis of type 1 capsular polysaccharide in Staphylococcus aureus. J. Bacteriol. 176:7005-7016.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 7005-7016
-
-
Lin, W.S.1
Cunneen, T.2
Lee, C.Y.3
-
18
-
-
0033387903
-
Complete nucleotide sequence of the prophage BT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak
-
Makino, K., K. Yokoyama, Y. Kubota, C. H. Yutsudo, S. Kimura, K. Kurokawa, K. Ishii, M. Hattori, I. Tatsuno, H. Abe, T. Iida, K. Yamamoto, M. Ohnishi, T. Hayashi, T. Yasunaga, T. Honda, C. Sasakawa, and H. Shinagawa. 1999. Complete nucleotide sequence of the prophage BT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Genes Genet. Syst. 74:227-239.
-
(1999)
Genes Genet. Syst.
, vol.74
, pp. 227-239
-
-
Makino, K.1
Yokoyama, K.2
Kubota, Y.3
Yutsudo, C.H.4
Kimura, S.5
Kurokawa, K.6
Ishii, K.7
Hattori, M.8
Tatsuno, I.9
Abe, H.10
Iida, T.11
Yamamoto, K.12
Ohnishi, M.13
Hayashi, T.14
Yasunaga, T.15
Honda, T.16
Sasakawa, C.17
Shinagawa, H.18
-
19
-
-
0033000469
-
Molecular subtyping of Clostridium perfringens by pulsed-field gel electrophoresis to facilitate food-borne-disease outbreak investigations
-
Maslanka, S. E., J. G. Kerr, G. Williams, J. M. Barbaree, L. A. Carson, J. M. Miller, and B. Swaminathan. 1999. Molecular subtyping of Clostridium perfringens by pulsed-field gel electrophoresis to facilitate food-borne-disease outbreak investigations. J. Clin. Microbiol. 37:2209-2214.
-
(1999)
J. Clin. Microbiol.
, vol.37
, pp. 2209-2214
-
-
Maslanka, S.E.1
Kerr, J.G.2
Williams, G.3
Barbaree, J.M.4
Carson, L.A.5
Miller, J.M.6
Swaminathan, B.7
-
20
-
-
0032562596
-
A distinctive class of integron in the Vibrio cholerae genome
-
Mazel, D., B. Dychinco, V. A. Webb, and J. Davies. 1998. a distinctive class of integron in the Vibrio cholerae genome. Science 280:605-608.
-
(1998)
Science
, vol.280
, pp. 605-608
-
-
Mazel, D.1
Dychinco, B.2
Webb, V.A.3
Davies, J.4
-
21
-
-
0030854797
-
Molecular and genetic characterization of the capsule biosynthesis locus of Streptococcus pneumoniae type 19B
-
Morona, J. K., R. Morona, and J. C. Paton. 1997. Molecular and genetic characterization of the capsule biosynthesis locus of Streptococcus pneumoniae type 19B. J. Bacteriol. 179:4953-4958.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 4953-4958
-
-
Morona, J.K.1
Morona, R.2
Paton, J.C.3
-
22
-
-
0032497817
-
A gene cluster for 6-deoxy-L-talan synthesis in Actinobacillus actinomycetemcomitans
-
Nakano, Y., Y. Yoshida, Y. Yamashita, and T. Koga. 1998. A gene cluster for 6-deoxy-L-talan synthesis in Actinobacillus actinomycetemcomitans. Biochim. Biophys. Acta 1442:409-414.
-
(1998)
Biochim. Biophys. Acta
, vol.1442
, pp. 409-414
-
-
Nakano, Y.1
Yoshida, Y.2
Yamashita, Y.3
Koga, T.4
-
23
-
-
0032963804
-
Conserved organizition in the cps gene clusters for expression of Escherichia coli group 1 K antigens: Relationship to the colanic acid biosynthesis locus and the cps genes from Klebsiella pneumoniae
-
Rahn, A., J. Drummelsmith, and C. Whitfield. 1999. Conserved organizition in the cps gene clusters for expression of Escherichia coli group 1 K antigens: relationship to the colanic acid biosynthesis locus and the cps genes from Klebsiella pneumoniae. J. Bacteriol. 181:2307-2313.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 2307-2313
-
-
Rahn, A.1
Drummelsmith, J.2
Whitfield, C.3
-
24
-
-
0026697257
-
Purification and determination of the structure of capsular polysaccharide of Vibrio vulnificus M06-24
-
Reddy, G. P., U. Hayat, C. Abeygunawardana, C. Fox, A. C. Wright, D. R. Maneval, Jr., C. A. Bush, and J. G. Morris, Jr. 1992. Purification and determination of the structure of capsular polysaccharide of Vibrio vulnificus M06-24. J. Bacteriol. 174:2620-2630.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 2620-2630
-
-
Reddy, G.P.1
Hayat, U.2
Abeygunawardana, C.3
Fox, C.4
Wright, A.C.5
Maneval D.R., Jr.6
Bush, C.A.7
Morris J.G., Jr.8
-
25
-
-
0032127461
-
Structure determination of the capsular polysaccharide from Vibrio vulnificus strain 6353
-
Reddy, G. P., U. Hayat, Q. Xu, K. V. Reddy, Y. Wang, K. W. Chiu, J. G. Morris, Jr., and C. A. Bush. 1998. Structure determination of the capsular polysaccharide from Vibrio vulnificus strain 6353. Eur. J. Biochem. 255:279-288.
-
(1998)
Eur. J. Biochem.
, vol.255
, pp. 279-288
-
-
Reddy, G.P.1
Hayat, U.2
Xu, Q.3
Reddy, K.V.4
Wang, Y.5
Chiu, K.W.6
Morris J.G., Jr.7
Bush, C.A.8
-
26
-
-
33745158157
-
A simple method of estimating fifty percent end points
-
Reed, L. J., and H. Muench. 1938. A simple method of estimating fifty percent end points. Am. J. Hyg. 27:493-497.
-
(1938)
Am. J. Hyg.
, vol.27
, pp. 493-497
-
-
Reed, L.J.1
Muench, H.2
-
27
-
-
0034740227
-
Application of a time-delay neural network to promoter annotation in the Drosophila melangaster genome
-
Reese, M. G. 2001. Application of a time-delay neural network to promoter annotation in the Drosophila melangaster genome. Comput. Chem. 26:51-56.
-
(2001)
Comput. Chem.
, vol.26
, pp. 51-56
-
-
Reese, M.G.1
-
28
-
-
0030464649
-
Bacterial polysaccharide synthesis and gene nomenclature
-
Reeves, P. R., M. Hobbs, M. A. Valvano, M. Skurnik, C. Whitfield, D. Coplin, N. Kido, J. Klena, D. Maskell, C. R. H. Raetz, and P. D. Rick. 1996. Bacterial polysaccharide synthesis and gene nomenclature. Trends Microbiol. 4:495-503.
-
(1996)
Trends Microbiol.
, vol.4
, pp. 495-503
-
-
Reeves, P.R.1
Hobbs, M.2
Valvano, M.A.3
Skurnik, M.4
Whitfield, C.5
Coplin, D.6
Kido, N.7
Klena, J.8
Maskell, D.9
Raetz, C.R.H.10
Rick, P.D.11
-
29
-
-
0017141052
-
Study of genetic relationships among marine species of the genera Benechea and Photobacterium by means of in vitro DNA/DNA hybridization
-
Reichelt, J. L., P. Baumann, and L. Baumann. 1976. Study of genetic relationships among marine species of the genera Benechea and Photobacterium by means of in vitro DNA/DNA hybridization. Arch. Microbiol. 110:101-120.
-
(1976)
Arch. Microbiol.
, vol.110
, pp. 101-120
-
-
Reichelt, J.L.1
Baumann, P.2
Baumann, L.3
-
30
-
-
0035895252
-
The evolutionary history of chromosomal super-integron ancestry for multiresistant integrons
-
Rowe-Magnus, D. A., A. Guerout, and D. Mazel. 2001. The evolutionary history of chromosomal super-integron ancestry for multiresistant integrons. Proc. Natl. Acad. Sci. USA 98:652-657.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 652-657
-
-
Rowe-Magnus, D.A.1
Guerout, A.2
Mazel, D.3
-
31
-
-
0023116740
-
Correlation between virulence and colony morphology in Vibrio vulnificus
-
Simpson, L. M., V. K. White, S. F. Zane, and J. D. Oliver. 1987. Correlation between virulence and colony morphology in Vibrio vulnificus. Infect. Immun. 55:269-272.
-
(1987)
Infect. Immun.
, vol.55
, pp. 269-272
-
-
Simpson, L.M.1
White, V.K.2
Zane, S.F.3
Oliver, J.D.4
-
32
-
-
0032570009
-
Genetic organization of the regions associated with surface polysaccharide synthesis in Vibrio cholerae O1, O139 and Vibrio anguillarum O1 and O2: A review
-
Stroeher, U. H., K. E. Jedani, and P. A. Manning. 1998. Genetic organization of the regions associated with surface polysaccharide synthesis in Vibrio cholerae O1, O139 and Vibrio anguillarum O1 and O2: a review. Gene 223:269-282.
-
(1998)
Gene
, vol.223
, pp. 269-282
-
-
Stroeher, U.H.1
Jedani, K.E.2
Manning, P.A.3
-
33
-
-
0035972864
-
Sequence of the E. coli O104 antigen gene cluster and identification of O104 specific genes
-
Wang, L., C. E. Briggs, D. Rothemund, P. Fratamico, J. B. Luchansky, and P. R. Reeves. 2001. Sequence of the E. coli O104 antigen gene cluster and identification of O104 specific genes. Gene 270:231-236.
-
(2001)
Gene
, vol.270
, pp. 231-236
-
-
Wang, L.1
Briggs, C.E.2
Rothemund, D.3
Fratamico, P.4
Luchansky, J.B.5
Reeves, P.R.6
-
34
-
-
13044313472
-
Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1
-
White, O., J. A. Eisen, J. F. Heidelberg, E. K. Hickey, J. D. Peterson, R. J. Dodson, D. H. Haft, M. L. Gwinn, W. C. Nelson, et al. 1999. Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1. Science 286:1571-1577.
-
(1999)
Science
, vol.286
, pp. 1571-1577
-
-
White, O.1
Eisen, J.A.2
Heidelberg, J.F.3
Hickey, E.K.4
Peterson, J.D.5
Dodson, R.J.6
Haft, D.H.7
Gwinn, M.L.8
Nelson, W.C.9
-
35
-
-
0033022996
-
Structure, assembly and regulation of expression of capsules in Escherichia coli
-
Whitfield, C., and I. S. Roberts. 1999. Structure, assembly and regulation of expression of capsules in Escherichia coli. Mol. Microbiol. 31:1307-1319.
-
(1999)
Mol. Microbiol.
, vol.31
, pp. 1307-1319
-
-
Whitfield, C.1
Roberts, I.S.2
-
36
-
-
0019840322
-
Role of iron in the pathogenesis of Vibrio vulnificus infections
-
Wright, A. C., L. M. Simpson, and J. D. Oliver. 1981. Role of iron in the pathogenesis of Vibrio vulnificus infections. Infect. Immun. 34:503-507.
-
(1981)
Infect. Immun.
, vol.34
, pp. 503-507
-
-
Wright, A.C.1
Simpson, L.M.2
Oliver, J.D.3
-
37
-
-
0034783472
-
Identification of a group 1-like capsular polysaccharide operon for Vibrio vulnificus
-
Wright, A. C., J. L. Powell, J. B. Kaper, and J. G. Morris, Jr. 2001. Identification of a group 1-like capsular polysaccharide operon for Vibrio vulnificus. Infect. Immun. 69:6893-6901.
-
(2001)
Infect. Immun.
, vol.69
, pp. 6893-6901
-
-
Wright, A.C.1
Powell, J.L.2
Kaper, J.B.3
Morris J.G., Jr.4
-
38
-
-
0032871197
-
The genes responsible for O-antigen synthesis of Vibrio cholerae O139 are closely related to those of Vibrio cholerae O22
-
Yamasaki, S., T. Shimizu, K. Hoshino, S. T. Ho, T. Shimada, G. B. Nair, and Y. Takeda. 1999. The genes responsible for O-antigen synthesis of Vibrio cholerae O139 are closely related to those of Vibrio cholerae O22. Gene 237:321-332.
-
(1999)
Gene
, vol.237
, pp. 321-332
-
-
Yamasaki, S.1
Shimizu, T.2
Hoshino, K.3
Ho, S.T.4
Shimada, T.5
Nair, G.B.6
Takeda, Y.7
-
39
-
-
0032758724
-
Genetic analysis of the gene cluster responsible for synthesis of serotype e-specific polysaccharide antigen in Actinobacillus actinomycetemcomitans
-
Yoshida, Y., Y. Nakano, N. Suzuki, H. Nakao, Y. Yamashita, and T. Koga. 1999. Genetic analysis of the gene cluster responsible for synthesis of serotype e-specific polysaccharide antigen in Actinobacillus actinomycetemcomitans. Biochim. Biophys. Acta 1489:457-461.
-
(1999)
Biochim. Biophys. Acta
, vol.1489
, pp. 457-461
-
-
Yoshida, Y.1
Nakano, Y.2
Suzuki, N.3
Nakao, H.4
Yamashita, Y.5
Koga, T.6
-
40
-
-
0031864976
-
An epimerase gene essential for capsule synthesis of Vibrio vulnificus
-
Zuppardo, A. B., and R. J. Siebeling. 1998. An epimerase gene essential for capsule synthesis of Vibrio vulnificus. Infect. Immun. 66:2601-2606.
-
(1998)
Infect. Immun.
, vol.66
, pp. 2601-2606
-
-
Zuppardo, A.B.1
Siebeling, R.J.2
|