Developmentally regulated extrachromosomal circular DNA formation in the mesozoan Dicyema japonicum

Chromosoma

Volumn 111, Issue 6, 2003, Pages 359-368

  Noto, Tomoko ^a   Yazaki, Kazumori ^b   Endoh, Hiroshi ^a  

^a KANAZAWA UNIVERSITY   (Japan)

^b TOKYO METROPOLITAN INSTITUTE OF MEDICAL SCIENCE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CIRCULAR DNA;

ARTICLE; CHROMOSOME; CHROMOSOME REPLICATION; DNA TEMPLATE; EMBRYO; EMBRYO DEVELOPMENT; EUKARYOTIC FLAGELLUM; GENE SEQUENCE; GENETIC CODE; IN SITU HYBRIDIZATION; LARVAL DEVELOPMENT; MESOZOIC; MICROORGANISM; MOLECULAR WEIGHT; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PARASITE; POLYMERASE CHAIN REACTION; SOMATIC CELL; SOMATIC EMBRYOGENESIS; SOUTHERN BLOTTING;

DICYEMA; DICYEMA JAPONICUM; DICYEMIDA; EUKARYOTA; MESOZOA;

EID: 0037356153     PISSN: 00095915     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00412-002-0216-2     Document Type: Article

References (38)

1. Bardele F Ch, Huttenlauch I, Schoppman H (1986) The ciliate cortex studied by TEM and SEM cryofracture techniques. Symp Biol Hung 33:115-124
2. Beermann S, Meyer GF (1980) Chromatin rings as products of chromatin diminution in Cyclops. Choromosoma 77:277-283
3. Bétermier M, Duharcourt S, Seitz H, Meyer E (2000) Timing of developmentally programmed excision and circularization of Paramecium internal eliminated sequences. Mol Cell Biol 20:1553-1561
4. Cavalier-Smith T (1993) Kingdom protozoa and its 18 phyla. Microbiol Rev 57:953-994
5. Cohen S, Lavi S (1996) Induction of circles of heterogeneous sizes in carcinogen-treated cells: Two dimensional gel analysis of circular DNA molecules. Mol Cell Biol 16:2002-2014
6. Cohen S, Méchali M (2001) A novel cell-free system reveals a mechanism of circular DNA formation from tandem repeats. Nucleic Acids Res 29:2542-2548
7. Cohen S, Regev A, Lavi S (1997) Small polydispersed circular DNA (spc DNA) in human cells: Association with genomic instability. Oncogene 14:977-985
8. Cohen S, Menut S, Méchali M (1999) Regulated formation of extrachromosomal circular DNA molecules during development in Xenopus laevis. Mol Cell Biol 16:6682-6689
9. Coyne SR, Chalker DL, Yao MC (1996) Genome downsizing during ciliate development: Nuclear division of labor through chromosome restructuring. Annu Rev Genet 30:557-578
10. Curtenaz S, Beisson J (1996) In situ hybridization as a method to study the regulation of gene expression in Paramecium. J Eukaryot Microbiol 43:202-212
11. Czaker R (2000) Extracellular matrix (ECM) components in a very primitive multicellular animal, the dicyemid mesozoa Kantharella antarctica. Anat Rec 259:52-59
12. Dodson EO (1956) A note on the systematic position of the Mesozoa. Syst Zool 5:37-40
13. Furuya H, Tsuneki K, Koshida Y (1992) Development of the infusoriform embryo of Dicyema japonicum (Mesozoa: Dicyemidae). Biol Bull 187:248-252
14. Furuya H, Tsuneki K, Koshida Y (1993) The development of the hermaphroditic gonad in four species of dicyemid mesozoans. Zool Sci 10:455-466
15. Gaubatz JW (1990) Extrachromosomal circular DNAs and genomic sequence plasticity in eukaryotic cells. Mutat Res 237:271-292
16. Harkey MA, Whiteley HR, Whiteley AH (1992) Differential expression of the msp130 gene among skeletal lineage cells in the sea urchin embryo: A three dimensional in situ hybridization analysis. Mech Dev 37:173-184
17. Hartmann M (1905) Untersuchungen über den Generationswechsel der dicyemiden. Mém Sci Acad Belg 1:1-126
18. Hyman LH (1940) Phylum Mesozoa. In: Shull F (ed) The Invertebrates 1. Protozoa Through Ctenophora 1. McGraw-Hill, New York, pp 233-247
19. Katayama T, Wada H, Furuya H, Satoh N, Yamamoto M (1995) Phylogenetic position of the dicyemid mesozoa inferred from 18S rDNA sequences. Biol Bull 189:81-90
20. Kleinschmidt AK (1968) Monolayer techniques in electron microscopy of nucleic acid molecules. Methods Enzymol 12B:361-377
21. Klobutcher LA, Herrick G (1997) Development genome reorganization in ciliated protozoa: The transposon link. Nucleic Acids Res Mol Biol 56:1-62
22. Kobayashi M, Furuya H, Holland PWH (1999) Dicyemids are higher animals. Nature 401:762
23. Kraut H, Lipps HJ, Prescott DM (1986) The genome of hypotrichous ciliates. Int Rev Cytol 99:1-25
24. Lapan EA, Morowitz HJ (1972) The Mesozoa. Sci Am 222:94-101
25. Lapan EA, Morowitz HJ (1975) The dicyemid mesozoa as an integrated system for morphogenetic studies. J Exp Zool 193:147-160
26. Margulis L,D Schwartz VK (1998) Five Kingdoms - An Illustrated Guide to the Phyla of Life on Earth, 3rd edn. WH Freeman, New York
27. McConaughey BH (1951) The life cycle of the dicyemid Mesozoa. Univ Calif Publ Zool 55:295-336
28. Nouvel H (1933) Recherches sur la cytologie, la physiologie et al biologie des dicyéides. Ann Inst Oceanogr Monaco 13:165-255
29. Pawlowski J, Montoya-Burgos JI,D Fahrni JF, Wuest J,D Zaninetti L (1996) Origin of the Mesozoa inferred from 18S rRNA gene sequences. Mol Biol Evol 13:1128-1132
30. Pont G, Degroote F, Picard G (1987) Some extrachromosomal circular DNAs from Drosophila embryos are homologous to tandemly repeated genes. J Mol Biol 195:447-451
31. Ridley RK (1968) Electron microscopic studies on dicyemid Mesozoa. I. Vermiform stages. J Parasitol 54:975-978
32. Ridley RK (1969) Electron microscopic studies on dicyemid Mesozoa. II. Infusorigen and infusoriform stages. J Parasitol 55:779-793
33. Sinclar DA, Guarante L (1997) Extrachromosomal rDNA circles - A cause of aging in yeast. Cell 91:1033-1042
34. Stunkard HW (1954) The life history and systematic relations of the mesozoa. Q Rev Biol 29:230-244
35. Tausta SL, Klobutcher LA (1989) Detection of circular forms of eliminated DNA during macronuclear development in E. crassus. Cell 59:1019-1026
36. Williams K, Doak TG, Herrick G (1993) Developmental precise excision of Oxytricha trifallax telomere-bearing elements and formation of circles closed by copy of the flanking target duplication. EMBO J 12:4593-4601
37. Yamagishi H, Kunisada T, Iwakura Y, Nishimura Y, Ogiso Y, Matushiro A (1983) Emergence of the extrachromosomal circular DNA complexes as one of the earliest signals of cellular differentiation in early development of mouse embryo. Dev Growth Differ 25:563-569
38. Yao MC,D Yao CH (1994) Detection of circular excised DNA deletion elements in Tetrahymena thermophla during development. Nucleic Acids Res 22:5702-5708