Mutations in a gene for plastid ribosomal protein S6-like protein reveal a novel developmental process required for the correct organization of lateral root meristem in Arabidopsis

Plant Journal

Volumn 33, Issue 3, 2003, Pages 521-529

  Horiguchi, Gorou ^a,b   Kodama, Hiroaki ^a,c   Iba, Koh ^a  

^a KYUSHU UNIVERSITY   (Japan)

^b NATIONAL INSTITUTE FOR BASIC BIOLOGY   (Japan)

^c CHIBA UNIVERSITY   (Japan)

Author keywords

Arabidopsis; Distal pattern; Enhancer trap; Lateral root; RFC3; Root apical meristem

Indexed keywords

BIOLOGICAL MEMBRANES; GENES; LIPIDS; PROTEINS; SUGAR (SUCROSE);

LATERAL ROOT FORMATIONS;

PLANTS (BOTANY);

AMINO ACID SEQUENCE; ARABIDOPSIS; ARABIDOPSIS PROTEINS; GLUCURONIDASE; GREEN FLUORESCENT PROTEINS; LUMINESCENT PROTEINS; MERISTEM; MOLECULAR SEQUENCE DATA; MUTATION; PLANT ROOTS; PLASTIDS; RECOMBINANT FUSION PROTEINS; RIBOSOMAL PROTEIN S6; RIBOSOMAL PROTEINS; SUCROSE;

ARABIDOPSIS;

EID: 0037324989     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.2003.01651.x     Document Type: Article

References (48)

1. Agalarov, S.C., Sridhar Prasad, G., Funke, P.M., Stout, C.D. and Williamson, J.R. (2000) Structure of the S15, S6, S18-rRNA complex: assembly of the 30S ribosome central domain. Science, 288, 107-112.
2. An, Y.Q., McDowell, J.M., Huang, S., McKinney, E.C., Chambliss, S. and Meagher, R.B. (1996) Strong, constitutive expression of the Arabidopsis ACT2/ACT8 actin subclass in vegetative tissues. Plant J. 10, 107-121.
3. Araki, N., Kusumi, K., Masamoto, K., Niwa, Y. and Iba, K. (2000) Temperature-sensitive Arabidopsis mutant defective in 1-deoxy-D-xylulose 5-phosphate synthase within the plastid non-mevalonate pathway of isoprenoid biosynthesis. Physiol. Plant. 108, 19-24.
4. Benfey, P.N. and Scheres, B. (2000) Root development. Curr. Biol. 10, R813-R815.
5. van den Berg, C., Willemsen, V., Hage, W., Weisbeek, P. and Scheres, B. (1995) Cell fate in the Arabidopsis root meristem determined by directional signaling. Nature, 378, 62-65.
6. van den Berg, C., Willemsen, V., Hendriks, G., Weisbeek, P. and Scheres, B. (1997) Short-range control of cell differentiation in the Arabidopsis root meristem. Nature, 390, 287-289.
7. Blilou, I., Frugier, F., Folmer, S., Serralbo, O., Willemsen, V., Wolkenfelt, H., Eloy, N.B., Ferreira, P.C.G., Weisbeek, P. and Scheres, B. (2002) The Arabidopsis HOBBIT gene encodes a CDC27 homolog that links the plant cell cycle to progression of cell differentiation. Genes Dev. 16, 2566-2575.
8. Boerjan, W., Cervera, M.T., Delarue, M., Beeckman, T., Dewitte, W., Bellini, C., Caboche, M., Van Onckelen, H., Van Montagu, M. and Inzé, D. (1995) superroot, a recessive mutation in Arabidopsis, confers auxin overproduction. Plant Cell 7, 1405-1419.
9. Casimiro, I., Marchant, A., Bhalerao, R.P., Beeckman, T., Dhooge, S., Swarup, R., Graham, N., Inzé, D., Sandberg, G., Casero, P.J. and Bennett, M. (2001) Auxin transport promotes Arabidopsis lateral root initiation. Plant Cell, 13, 843-852.
10. Celenza, J.L., Jr, Grisafi, P.L. and Fink, G.R. (1995) A pathway for lateral root formation in Arabidopsis thaliana. Genes Dev. 9, 2131-2142.
11. Cheng, J.-C., Seeley, K.A. and Sung, Z.R. (1995) RML1 and RML2, Arabidopsis genes required for cell proliferation at the root tip. Plant Physiol. 107, 365-376.
12. Clemons, W.M., Jr, May, J.L., Wimberly, B.T., McCutcheon, J.P., Capel, M.S. and Ramakrishnan, V. (1999) Structure of a bacterial 30S ribosomal subunit at 5.5 Å resolution. Nature, 400, 833-840.
13. Delarue, M., Prinsen, E., Onckelen, H.V., Caboche, M. and Bellini, C. (1998) Sur2 mutations of Arabidopsis thaliana define a new locus involved in the control of auxin homeostasis. Plant J. 14, 603-611.
14. Di Laurenzio, L., Wysocka-Diller, J., Malamy, J.E., Pysh, L., Helariutta, Y., Freshour, G., Hahn, M.G., Feldmann, K.A. and Benfey, P.N. (1996) The SCARECROW gene regulates an asymmetric cell division that is essential for generating the radial organization of Arabidopsis root. Cell, 86, 423-433.
15. Dolan, L., Janmaat, K., Willemsen, V., Linstead, P., Poethig, S., Roberts, K. and Scheres, B. (1993) Cellular organisation of the Arabidopsis thaliana root. Development, 119, 71-84.
16. Friml, J., Benkova, E., Blilou, I., Wisniewska, J., Hamann, T., Ljung, K., Woody, S., Sandberg, G., Scheres, B., Jürgens, G. and Palme, K. (2002) AtPIN4 mediates sink-driven auxin gradients and root patterning in Arabidopsis. Cell, 108, 661-673.
17. Fukaki, H., Tameda, S., Masuda, H. and Tasaka, M. (2002) Lateral root formation is blocked by a gain-of-function mutation in the SOLITARY-ROOT/IAA14 gene of Arabidopsis. Plant J. 29, 153-168.
18. Hamann, T., Benkova, E., Bäurle, I., Kientz, M. and Jürgens, G. (2002) The Arabidopsis BODENLOS gene encodes an auxin response protein inhibiting MONOPTEROS-mediated embryo patterning. Genes Dev. 16, 1610-1615.
19. Hamann, T., Mayer, U. and Jürgens, G. (1999) The auxin-insensitive bodenlos mutation affects primary root formation and apical-basal patterning in the Arabidopsis embryo. Development, 126, 1387-1395.
20. Hardtke, C.S. and Berleth, T. (1998) The Arabidopsis gene MONOPTEROS encodes a transcription factor mediating embryo axis formation and vascular development. EMBO J. 17, 1405-1411.
21. Helaruitta, Y., Fukaki, H., Wysocka-Diller, J., Nakajima, K., Jung, J., Sena, G., Hauser, M.-T. and Benfey, P. (2000) The SHORT-ROOT gene controls radial patterning of the Arabidopsis root through radial signaling. Cell, 101, 555-567.
22. Hobbie, L and Estelle, M. (1995) The axr4 auxin-resistant mutants of Arabidopsis thaliana define a gene important for root gravitropism and lateral root initiation. Plant J. 7, 211-220.
23. Horiguchi, G., Kodama, H. and Iba, K. (2001) Characterization of Arabidopsis mutants that are associated with altered C18 unsaturated fatty acid metabolism. Plant Sci. 161, 1117-1123.
24. Kodama, H., Horiguchi, G., Nishiuchi, T., Nishimura, M. and Iba, K. (1995) Fatty acid desaturation during chilling acclimation is one of the factors involved in conferring low-temperature tolerance to young tobacco leaves. Plant Physiol. 107, 1177-1185.
25. Laskowski, M.J., Williams, M.E., Nusbaum, H.C. and Sussex, I.M. (1995) Formation of lateral root meristem is a two-stage process. Development, 121, 3303-3310.
26. Laux, T. and Jürgens, G. (1997) Embryogenesis: a new start in life. Plant Cell, 9, 989-1000.
27. Lindahl, M., Svensson, L.A., Liljas, A., Sedelnikova, S.E., Eliseikina, I.A., Fomenkova, N.P., Nevskaya, N., Nikonov, S.V., Garber, M.B. and Muranova, T.A. (1994) Crystal structure of the ribosomal protein S6 from Thermus thermophilus. EMBO J. 13, 1249-1254.
28. Malamy, J.E. and Benfey, P.N. (1997) Organization and cell differentiation in lateral roots of Arabidopsis thaliana. Development, 124, 33-44.
29. Marchant, A., Bhalerao, R., Casimiro, I., Eklöf, J., Casero, P.J., Bennett, M. and Sandberg, G. (2002) AUX1 promotes lateral root formation by facilitating indole-3-acetic acid distribution between sink and source tissues in the Arabidopsis seedling. Plant Cell, 14, 589-597.
30. Murashige, T. and Skoog, F. (1962) A revised medium for rapid growth and bio assays with tobacco tissue cultures. Physiol. Plant. 15, 473-497.
31. Nakajima, K., Sena, G., Nawy, T. and Benfey, P.N. (2001) Intercellular movement of the putative transcription factor SHR in root patterning. Nature, 413, 307-311.
32. Niwa, Y., Hirano, T., Yoshimoto, K., Shimizu, M. and Kobayashi, H. (1999) Non-invasive quantitative detection and application of non-toxic, S65T-type green fluorescent protein in living plants. Plant J. 18, 455-463.
33. Ozawa, S., Yasutani, I., Fukuda, H., Komamine, A. and Sugiyama, M. (1998) Organogenic responses in tissue culture of srd mutants of Arabidopsis thaliana. Development, 125, 135-142.
34. Reed, R.C., Brady, S.R. and Muday, G.K. (1998) Inhibition of auxin movement from the shoot into the root inhibits lateral root development in Arabidopsis. Plant Physiol. 118, 1369-1378.
35. Rodermel, S. (2001) Pathways of plastid-to-nucleus signaling. Trends Plant Sci. 6, 471-478.
36. Rogg, L.E., Lasswell, J. and Bartel, B. (2001) A gain-of-function mutation in IAA28 suppresses lateral root development. Plant Cell, 13, 465-480.
37. Ruegger, M., Dewey, E., Gray, W.M., Hobble, L., Turner, J. and Estelle, M. (1998) The TIR1 protein of Arabidopsis functions in auxin response and is related to human SKP2 and yeast Grr1p. Genes Dev. 12, 198-207.
38. Ruegger, M., Dewey, E., Hobbie, L., Brown, D., Bernasconi, P., Turner, J., Muday, G. and Estelle, M. (1997) Reduced naphthylphthalamic acid binding in the tir3 mutant of Arabidopsis is associated with a reduction in polar auxin transport and diverse morphological defects. Plant Cell, 9, 745-757.
39. Sabatini, S., Beis, D., Wolkenfelt, H., Murfett, J., Guilfoyle, T., Malamy, J., Benfey, P., Leyser, O., Bechtold, N., Weisbeek, P. and Scheres, B. (1999) An auxin-dependent distal organizer of pattern and polarity in the Arabidopsis root. Cell, 99, 463-472.
40. Skinner, D.J., Baker, S.C., Meister, R.J., Broadhvest, J., Schneitz, K. and Gasser, C.S. (2001) The Arabidopsis HUELLENLOS gene, which is essential for normal ovule development, encodes a mitochondrial ribosomal protein. Plant Cell, 13, 2719-2730.
41. Sugiyama, M. (1999) Organogenesis in vitro. Curr. Opin. Plant Biol. 2, 61-64.
42. Tian, Q. and Reed, J.W. (1999) Control of auxin-regulated root development by the Arabidopsis thaliana SHY2/IAA3 gene. Development, 126, 711-721.
43. Vernoux, T., Wilson, R.C., Seeley, K.A. et al. (2000) The ROOT MERISTEMLESS1/CADMIUM SENSITIVE2 gene defines a glutathione-dependent pathway involved in initiation and maintenance of cell division during postembryonic root development. Plant Cell, 12, 97-110.
44. Wallis, J.G. and Browse, J. (2002) Mutants of Arabidopsis reveal many roles for membrane lipids. Prog. Lipid Res. 41, 254-278.
45. Wang, Y., Duby, G., Purnelle, B. and Boutry, M. (2000) Tobacco VDL gene encodes a plastid DEAD box RNA helicase and is involved in chloroplast differentiation and plant morphogenesis. Plant Cell, 12, 2129-2142.
46. Willemsen, V., Wolkenfelt, H., de Vrieze, G., Weisbeek, P. and Scheres, B. (1998) The HOBBIT gene is required for formation of the root meristem in the Arabidopsis embryo. Development, 125, 521-531.
47. Xie, Q., Frugis, G., Colgan, D. and Cha, N.-H. (2000) Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development. Genes Dev. 23, 3024-3036.
48. Yamaguchi, K., von Knoblauch, K. and Subramanian, A.R. (2000) The plastid ribosomal proteins, identification of all the proteins in the 30 S subunit of an organelle ribosome (chloroplast). J. Biol. Chem. 275, 28455-28465.